| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779043
Identifier: 78779043
GI number: 78779043
Start: 619035
End: 619583
Strand: Reverse
Name: 78779043
Synonym: PMT9312_0658
Alternate gene names: NA
Gene position: 619583-619035 (Counterclockwise)
Preceding gene: 78779044
Following gene: 78779042
Centisome position: 36.25
GC content: 23.68
Gene sequence:
>549_bases ATGTCTAGAAAAAATTTAAATTTCAAATCAACAATATTTAAAATTTCTATTTTTTATGTAACCATCTATTTATTTGCTCT TTTTCTTAGATATAGCAATGGCTTAGAAAATTTAGTAATAGACATTGAATATAGATATTTGGCATTAATAAATATTATTT CTATATTTCTAGGCCTACCGATATCCATCGTATTTGACTTTATATTGATAAAGTTTTTTGGTTTTAAATATATTATTTTT TTTGCACCAATTTTAACTATTTTAGGGGTTGCTCAAATCATATTACTCAGAAAAACAAATTTAAGATTTCCAAAAAACAT ACCTTTCATAAAAAATATTAGAAATCAAAGACTAAAGCATATATTTGCAAATATTACTTTCAAACCAATTTTCATTTTAA TAATACGTACTTTCCCTATACTGCCCTTCTCTTTAGGAAGCTATATTATTGCATCATCAGAAATGAATAAGAGAATAATA ATAGTTTATTCACTAATTGGAGCATACCTTTACTATTATTCGCTTTTCTTTATTATCCAAATTGCATAG
Upstream 100 bases:
>100_bases GAGGGCACTCTTTCAATACGAGAATTGGTAATTTAATTAGAATGACAAGAAATCTTGAAAAATTATTCTTTGATAAATAT TTGGGGATATTCAATTTAAT
Downstream 100 bases:
>100_bases TACAAAAAGATATTTTTTATTATTAACAATTTTTACATGTTAAAAGATATTTATTATTTTCCTCTTTTGGGATTGTTATA GAATCTTTTTATAAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSRKNLNFKSTIFKISIFYVTIYLFALFLRYSNGLENLVIDIEYRYLALINIISIFLGLPISIVFDFILIKFFGFKYIIF FAPILTILGVAQIILLRKTNLRFPKNIPFIKNIRNQRLKHIFANITFKPIFILIIRTFPILPFSLGSYIIASSEMNKRII IVYSLIGAYLYYYSLFFIIQIA
Sequences:
>Translated_182_residues MSRKNLNFKSTIFKISIFYVTIYLFALFLRYSNGLENLVIDIEYRYLALINIISIFLGLPISIVFDFILIKFFGFKYIIF FAPILTILGVAQIILLRKTNLRFPKNIPFIKNIRNQRLKHIFANITFKPIFILIIRTFPILPFSLGSYIIASSEMNKRII IVYSLIGAYLYYYSLFFIIQIA >Mature_181_residues SRKNLNFKSTIFKISIFYVTIYLFALFLRYSNGLENLVIDIEYRYLALINIISIFLGLPISIVFDFILIKFFGFKYIIFF APILTILGVAQIILLRKTNLRFPKNIPFIKNIRNQRLKHIFANITFKPIFILIIRTFPILPFSLGSYIIASSEMNKRIII VYSLIGAYLYYYSLFFIIQIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21440; Mature: 21309
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKNLNFKSTIFKISIFYVTIYLFALFLRYSNGLENLVIDIEYRYLALINIISIFLGLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCH ISIVFDFILIKFFGFKYIIFFAPILTILGVAQIILLRKTNLRFPKNIPFIKNIRNQRLKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IFANITFKPIFILIIRTFPILPFSLGSYIIASSEMNKRIIIVYSLIGAYLYYYSLFFIIQ HHHCCCHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHC IA CC >Mature Secondary Structure SRKNLNFKSTIFKISIFYVTIYLFALFLRYSNGLENLVIDIEYRYLALINIISIFLGLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCH ISIVFDFILIKFFGFKYIIFFAPILTILGVAQIILLRKTNLRFPKNIPFIKNIRNQRLKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IFANITFKPIFILIIRTFPILPFSLGSYIIASSEMNKRIIIVYSLIGAYLYYYSLFFIIQ HHHCCCHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHC IA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA