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The map label for this gene is 78779045

Identifier: 78779045

GI number: 78779045

Start: 622042

End: 622308

Strand: Reverse

Name: 78779045

Synonym: PMT9312_0660

Alternate gene names: NA

Gene position: 622308-622042 (Counterclockwise)

Preceding gene: 78779046

Following gene: 78779044

Centisome position: 36.41

GC content: 26.97

Gene sequence:

>267_bases
ATGACATTAAGCTTAAATATTGGGAACATATTTAATGATTCCTCCAGTCATGCCTTGGTGGATGAGCTAAGAAAAAGAAC
ATCAGAAGAGGATATATTAGACTTTGAAGAAAAATTTAACTCCAAAAATGAAAAAAATCTACATATATATATATGTAGAT
TTCTAAAAAATAGATCAATATCCAGGGGACTTGCCTCTAAATGGTTAGTGACAATAATTAAAAACAAAGAATCAAAAATT
AATGCTTTGCAAAAATTAAATAATTAG

Upstream 100 bases:

>100_bases
CCTAAAGATTAATTTTTAAATTATTTGTAAATAAAAAATATAAAATAGTTTTTAAAAATTTAATTTATGGCTACCTCTTA
AATAGGGACATAAATTATTT

Downstream 100 bases:

>100_bases
GTGAGAGCTGAAAGTCTCCATAGTGCAATTCCAAAAATTGAGAATCCCATAATAAAAGTAAAAGCCAAGGCGTTTACCAA
CTGAACTTTTTCATCCATTT

Product: RNA recognition motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTLSLNIGNIFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHIYICRFLKNRSISRGLASKWLVTIIKNKESKI
NALQKLNN

Sequences:

>Translated_88_residues
MTLSLNIGNIFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHIYICRFLKNRSISRGLASKWLVTIIKNKESKI
NALQKLNN
>Mature_87_residues
TLSLNIGNIFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHIYICRFLKNRSISRGLASKWLVTIIKNKESKIN
ALQKLNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10238; Mature: 10107

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSLNIGNIFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHIYICRFLKNRSI
CEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHCCCH
SRGLASKWLVTIIKNKESKINALQKLNN
HHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TLSLNIGNIFNDSSSHALVDELRKRTSEEDILDFEEKFNSKNEKNLHIYICRFLKNRSI
EEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHCCCH
SRGLASKWLVTIIKNKESKINALQKLNN
HHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA