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The map label for this gene is 78779036

Identifier: 78779036

GI number: 78779036

Start: 615117

End: 615614

Strand: Reverse

Name: 78779036

Synonym: PMT9312_0651

Alternate gene names: NA

Gene position: 615614-615117 (Counterclockwise)

Preceding gene: 78779037

Following gene: 78779035

Centisome position: 36.02

GC content: 32.93

Gene sequence:

>498_bases
ATGCCTAGTAATTGGTCAAAAATAAGAGATGAATGGCTTGATAGAACCGCCATTGCGAAAGATGATGCTAAATGGGCATT
AGAAGCTTTAATGAATTCTGAAGAAGAGTTATTTGAAATAGAACAAAAAATCAAGAATAAAGAGGACGCTATAAGCCAAG
TAAAAATTTTGAAGAAAAAGGTTAAAGAAACTATTTCTTCTAAAGAAATTAGTCTCGATGATATTGCATTAAATACTTCA
AATTCGAACAAATTACAGATCTCAGTACCATCTAATCTTACTTATCTTTTGAAAGTTTGGGCTGCAGCAGAAGGTAGAGA
TCTATCAAGTGTTGCTTTTCAGTGTTTAGAAACTGGTATAAGGGAAATGAAAAGCAAAGGTTCTATACCTTCAGTAGCAG
TAAATAGATATGACTCGGCCTGTCAAAAGAGGATTGCACTAGCAGAAGTAAACAATCTATTGGAGAAATACGAAATAGCT
CAGAATGAAATCAAATAA

Upstream 100 bases:

>100_bases
ATACGAAATTCAAACCTCTATGCAATCTAAATTAAATCTAAACAGATTAAGTAGACAATCTATTTAGATTTGAGTATTAT
AGAGTTATCGCATAAAGCTT

Downstream 100 bases:

>100_bases
TTATGAATAACAGAAGAATCATAAAAGGATACAAAACATTAATACCATCAAGGTTTAATGTAGGTACTTCAAAAGATAAA
TTCAAAGACGGAATAATTTA

Product: VHS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPSNWSKIRDEWLDRTAIAKDDAKWALEALMNSEEELFEIEQKIKNKEDAISQVKILKKKVKETISSKEISLDDIALNTS
NSNKLQISVPSNLTYLLKVWAAAEGRDLSSVAFQCLETGIREMKSKGSIPSVAVNRYDSACQKRIALAEVNNLLEKYEIA
QNEIK

Sequences:

>Translated_165_residues
MPSNWSKIRDEWLDRTAIAKDDAKWALEALMNSEEELFEIEQKIKNKEDAISQVKILKKKVKETISSKEISLDDIALNTS
NSNKLQISVPSNLTYLLKVWAAAEGRDLSSVAFQCLETGIREMKSKGSIPSVAVNRYDSACQKRIALAEVNNLLEKYEIA
QNEIK
>Mature_164_residues
PSNWSKIRDEWLDRTAIAKDDAKWALEALMNSEEELFEIEQKIKNKEDAISQVKILKKKVKETISSKEISLDDIALNTSN
SNKLQISVPSNLTYLLKVWAAAEGRDLSSVAFQCLETGIREMKSKGSIPSVAVNRYDSACQKRIALAEVNNLLEKYEIAQ
NEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18660; Mature: 18529

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNWSKIRDEWLDRTAIAKDDAKWALEALMNSEEELFEIEQKIKNKEDAISQVKILKKK
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
VKETISSKEISLDDIALNTSNSNKLQISVPSNLTYLLKVWAAAEGRDLSSVAFQCLETGI
HHHHHHHCCCCHHHEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
REMKSKGSIPSVAVNRYDSACQKRIALAEVNNLLEKYEIAQNEIK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSNWSKIRDEWLDRTAIAKDDAKWALEALMNSEEELFEIEQKIKNKEDAISQVKILKKK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
VKETISSKEISLDDIALNTSNSNKLQISVPSNLTYLLKVWAAAEGRDLSSVAFQCLETGI
HHHHHHHCCCCHHHEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
REMKSKGSIPSVAVNRYDSACQKRIALAEVNNLLEKYEIAQNEIK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA