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The map label for this gene is 78779035

Identifier: 78779035

GI number: 78779035

Start: 614722

End: 615114

Strand: Reverse

Name: 78779035

Synonym: PMT9312_0650

Alternate gene names: NA

Gene position: 615114-614722 (Counterclockwise)

Preceding gene: 78779036

Following gene: 78779033

Centisome position: 35.99

GC content: 25.7

Gene sequence:

>393_bases
ATGAATAACAGAAGAATCATAAAAGGATACAAAACATTAATACCATCAAGGTTTAATGTAGGTACTTCAAAAGATAAATT
CAAAGACGGAATAATTTATACTCTTTATTCTGATGAATTTAATTCACTTAAAGTTGGTTTTGCTGAAAATGATAAGGTTC
TAGAAAAAAAATTATCAAGTGAGTCATTAATATTATTGGATATAAAAAAAGGCAATAAGAAAGATCTATTTTTGTTAATA
ACCACTCTAAAAGAAATTGGTATCAAATATTCAGACAATCTTTATTTCAAATACTCAGGTTCTTTAATGAGACATTTATC
TACTTTAGGTTGGCCTGTTGGAAGATCACTTTATAAACAAAGAAAAATTAAAAAAGAACTTGTATGCGCATAA

Upstream 100 bases:

>100_bases
TAAATAGATATGACTCGGCCTGTCAAAAGAGGATTGCACTAGCAGAAGTAAACAATCTATTGGAGAAATACGAAATAGCT
CAGAATGAAATCAAATAATT

Downstream 100 bases:

>100_bases
ATTTAAATGTAGTCGCACTCTAAAGTTTCTCTGGTATCTCTATTTGTGATTGGATTAGTGCCAGAGGCACTTTCACAAAA
TTTCCTAACAATATCTTTTG

Product: LEM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNNRRIIKGYKTLIPSRFNVGTSKDKFKDGIIYTLYSDEFNSLKVGFAENDKVLEKKLSSESLILLDIKKGNKKDLFLLI
TTLKEIGIKYSDNLYFKYSGSLMRHLSTLGWPVGRSLYKQRKIKKELVCA

Sequences:

>Translated_130_residues
MNNRRIIKGYKTLIPSRFNVGTSKDKFKDGIIYTLYSDEFNSLKVGFAENDKVLEKKLSSESLILLDIKKGNKKDLFLLI
TTLKEIGIKYSDNLYFKYSGSLMRHLSTLGWPVGRSLYKQRKIKKELVCA
>Mature_130_residues
MNNRRIIKGYKTLIPSRFNVGTSKDKFKDGIIYTLYSDEFNSLKVGFAENDKVLEKKLSSESLILLDIKKGNKKDLFLLI
TTLKEIGIKYSDNLYFKYSGSLMRHLSTLGWPVGRSLYKQRKIKKELVCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15019; Mature: 15019

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRRIIKGYKTLIPSRFNVGTSKDKFKDGIIYTLYSDEFNSLKVGFAENDKVLEKKLSS
CCCCEEECHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHCCC
ESLILLDIKKGNKKDLFLLITTLKEIGIKYSDNLYFKYSGSLMRHLSTLGWPVGRSLYKQ
CCEEEEEECCCCCCCEEEHEEHHHHHCCEECCCEEEEECCHHHHHHHHCCCCCHHHHHHH
RKIKKELVCA
HHHHHHHCCC
>Mature Secondary Structure
MNNRRIIKGYKTLIPSRFNVGTSKDKFKDGIIYTLYSDEFNSLKVGFAENDKVLEKKLSS
CCCCEEECHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHCCC
ESLILLDIKKGNKKDLFLLITTLKEIGIKYSDNLYFKYSGSLMRHLSTLGWPVGRSLYKQ
CCEEEEEECCCCCCCEEEHEEHHHHHCCEECCCEEEEECCHHHHHHHHCCCCCHHHHHHH
RKIKKELVCA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA