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The map label for this gene is 78779033

Identifier: 78779033

GI number: 78779033

Start: 612499

End: 614139

Strand: Reverse

Name: 78779033

Synonym: PMT9312_0648

Alternate gene names: NA

Gene position: 614139-612499 (Counterclockwise)

Preceding gene: 78779035

Following gene: 78779030

Centisome position: 35.93

GC content: 35.53

Gene sequence:

>1641_bases
TTGGATATAAGTCCTTATGATGCAATTGTTGTTGGTTCTGGAGCTACAGGAGGAATAGCAGCACTTACATTGGCAGAACA
GGGGATAAAAGTTTTAATAATAGAAGCAGGGCCTCAAGTCAAAAGGCATGAAGCTAGTAATCATGAGCCAAAAAGTACAT
TTAAAAGATTTTCAGGAGTTTTAACAAAAAAACATGCCAATCAATGCCAACATCCTGGCTATTGGAAAAATAATCCTGAT
TTATATTCAAATGAATTGAAGCATCCTTATGACTTCCCAAAAAAAAAGCCCTTTCTTTGGACTCAAGGTAAACAATATGG
GGGGAGATCATTAACGTGGGGAGGCATAACATTAAGACTTTCCTCAGAAGATTTTCATCCAGCTAAAAAAGACGGATTCG
GACCAAACTGGCCTATTTCATACGATGAACTATCCCCTCACTATGATTTCATTGAAAGTTTCTGCGGCATCTATGGACGA
AAAGATGATATTAAGGAAGTCCCAAACGGTAAATATATTAGTGAAATCCCTCTTACAGAAAACGAAAATGTTTTTGGCAG
CAAAGTTAAATCAAAATTAAACTATCCATTTATCCAATCAAGAGGATTTGACCGTAATTCATCAGTAAAAGATAAAAAAT
GGCCCAAGTCCTCCAGTTTAGGAAGCACTTTAAAAAAAGCTTTAGATACTGGGAATGTACAAATAATCTCAAATCACCTA
GTGGAGTCTTTTGAGATTAACAAGATAACAGAGCTTGCATCAAAAATAACGATCGTAAACCTAGAAAATGGATGCAAAAA
AGAATTAAATTGTGATTTAATCCTTCTTTGCGCATCAACAATTTCAACTCTCCGAATACTACTGAACTCAGAATATAAAT
CAAATTCCTCAGGTTTTAAAGATGATTCTGGGAAATTAGGTAAATACCTCATGGACCATATATCTATCTGTAGATTTTTT
TCAGTCCCAAAAACAAAAATATCAGGAAAACCATTAGATAATCCTCCTGATCTTTCTGGAGCAGGCAGCTTCTTTATTCC
ATTTGGTTCAAATTTACCCAAAATTGACGAAATAAATTTCAATAGAGGTTATGGAATCTGGGGGGCAATTGATAGATTAG
GGATACCTAAATTTTTGCAAAAAGACACAAAGACATCCATTGGCTTTCTTATTGCCCATGGTGAAGTCCTTCCTAGAGAG
AAGAACTCAGTTTCTCTATCAAGAAAAACAGATGAATGGGGTATCCCAATTCCCTACATTGAATTCGAATGGAGCAAAAA
TGAGTTAAATATGGCAAAACATATGGAAAAGACAATACTAAAATCAATAGAAGCTGCAAATGGAGAAATAAAAAATATTG
ATGAACTAATTAATATCCCATTAGGTAGTTTACTTACAAAAAACTTGATCGCACTTTCAGATAGTCCGCCTCCCCCAGGA
TATTACATACATGAAGTAGGAGGCGCACCAATGGGAACTAATGAAGAAAATAGCGTAGTTGATAAATTTAATAGAATATG
GAGATGCAAGAATGTACTTGTGCTAGATGGAGCGTGCTGGCCAACTTCATCTTGGCAAAGCCCCACACTTACAATGATGG
CTTTGTGTAGGAGAGCCTGCCTAAATATTAAAAAGATTTAG

Upstream 100 bases:

>100_bases
GAGTAGTATTTCAAAAATTCTAACTTCTTAAGCTGAAATCTAAAAATTAATTATTTACTGAATGCTATATTTATTGAAAT
AACAAATTACGAACTAGGTT

Downstream 100 bases:

>100_bases
AAGGAGTAAATAGTTGATTTAAATAAATCTCTGAAACAGAATTATCCGTACATCCGTTTTGAACCAGAAAAGTAGCTAAT
GCTGAATTTATAAGTTTATA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Glucoside 3-Dehydrogenase; Gluconate 2-Dehydrogenase; Fad Dependent Oxidoreductase; Choline Dehydrogenase And Flavoproteins-Like Protein; FAD Dependent Oxidoreductase; 2-Keto-Gluconate Dehydrogenase; Oxidoreductase GMC Family; Dehydrogluconate Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLIIEAGPQVKRHEASNHEPKSTFKRFSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIESFCGIYGR
KDDIKEVPNGKYISEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKDKKWPKSSSLGSTLKKALDTGNVQIISNHL
VESFEINKITELASKITIVNLENGCKKELNCDLILLCASTISTLRILLNSEYKSNSSGFKDDSGKLGKYLMDHISICRFF
SVPKTKISGKPLDNPPDLSGAGSFFIPFGSNLPKIDEINFNRGYGIWGAIDRLGIPKFLQKDTKTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSKNELNMAKHMEKTILKSIEAANGEIKNIDELINIPLGSLLTKNLIALSDSPPPPG
YYIHEVGGAPMGTNEENSVVDKFNRIWRCKNVLVLDGACWPTSSWQSPTLTMMALCRRACLNIKKI

Sequences:

>Translated_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLIIEAGPQVKRHEASNHEPKSTFKRFSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIESFCGIYGR
KDDIKEVPNGKYISEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKDKKWPKSSSLGSTLKKALDTGNVQIISNHL
VESFEINKITELASKITIVNLENGCKKELNCDLILLCASTISTLRILLNSEYKSNSSGFKDDSGKLGKYLMDHISICRFF
SVPKTKISGKPLDNPPDLSGAGSFFIPFGSNLPKIDEINFNRGYGIWGAIDRLGIPKFLQKDTKTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSKNELNMAKHMEKTILKSIEAANGEIKNIDELINIPLGSLLTKNLIALSDSPPPPG
YYIHEVGGAPMGTNEENSVVDKFNRIWRCKNVLVLDGACWPTSSWQSPTLTMMALCRRACLNIKKI
>Mature_546_residues
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLIIEAGPQVKRHEASNHEPKSTFKRFSGVLTKKHANQCQHPGYWKNNPD
LYSNELKHPYDFPKKKPFLWTQGKQYGGRSLTWGGITLRLSSEDFHPAKKDGFGPNWPISYDELSPHYDFIESFCGIYGR
KDDIKEVPNGKYISEIPLTENENVFGSKVKSKLNYPFIQSRGFDRNSSVKDKKWPKSSSLGSTLKKALDTGNVQIISNHL
VESFEINKITELASKITIVNLENGCKKELNCDLILLCASTISTLRILLNSEYKSNSSGFKDDSGKLGKYLMDHISICRFF
SVPKTKISGKPLDNPPDLSGAGSFFIPFGSNLPKIDEINFNRGYGIWGAIDRLGIPKFLQKDTKTSIGFLIAHGEVLPRE
KNSVSLSRKTDEWGIPIPYIEFEWSKNELNMAKHMEKTILKSIEAANGEIKNIDELINIPLGSLLTKNLIALSDSPPPPG
YYIHEVGGAPMGTNEENSVVDKFNRIWRCKNVLVLDGACWPTSSWQSPTLTMMALCRRACLNIKKI

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60894; Mature: 60894

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLIIEAGPQVKRHEASNHEPKSTFKRFSGV
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHH
LTKKHANQCQHPGYWKNNPDLYSNELKHPYDFPKKKPFLWTQGKQYGGRSLTWGGITLRL
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYDELSPHYDFIESFCGIYGRKDDIKEVPNGKYISEIPLTE
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGSKVKSKLNYPFIQSRGFDRNSSVKDKKWPKSSSLGSTLKKALDTGNVQIISNHL
CCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKITELASKITIVNLENGCKKELNCDLILLCASTISTLRILLNSEYKSNSSGFK
HHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCC
DDSGKLGKYLMDHISICRFFSVPKTKISGKPLDNPPDLSGAGSFFIPFGSNLPKIDEINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
NRGYGIWGAIDRLGIPKFLQKDTKTSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPYI
CCCCCHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSKNELNMAKHMEKTILKSIEAANGEIKNIDELINIPLGSLLTKNLIALSDSPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHCCCHHHHHHHHHEEECCCCCCCC
YYIHEVGGAPMGTNEENSVVDKFNRIWRCKNVLVLDGACWPTSSWQSPTLTMMALCRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LNIKKI
CCCCCC
>Mature Secondary Structure
MDISPYDAIVVGSGATGGIAALTLAEQGIKVLIIEAGPQVKRHEASNHEPKSTFKRFSGV
CCCCCCCEEEECCCCCCCCEEEEEHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHH
LTKKHANQCQHPGYWKNNPDLYSNELKHPYDFPKKKPFLWTQGKQYGGRSLTWGGITLRL
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SSEDFHPAKKDGFGPNWPISYDELSPHYDFIESFCGIYGRKDDIKEVPNGKYISEIPLTE
CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCC
NENVFGSKVKSKLNYPFIQSRGFDRNSSVKDKKWPKSSSLGSTLKKALDTGNVQIISNHL
CCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHH
VESFEINKITELASKITIVNLENGCKKELNCDLILLCASTISTLRILLNSEYKSNSSGFK
HHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCC
DDSGKLGKYLMDHISICRFFSVPKTKISGKPLDNPPDLSGAGSFFIPFGSNLPKIDEINF
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
NRGYGIWGAIDRLGIPKFLQKDTKTSIGFLIAHGEVLPREKNSVSLSRKTDEWGIPIPYI
CCCCCHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE
EFEWSKNELNMAKHMEKTILKSIEAANGEIKNIDELINIPLGSLLTKNLIALSDSPPPPG
EEEECCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHCCCHHHHHHHHHEEECCCCCCCC
YYIHEVGGAPMGTNEENSVVDKFNRIWRCKNVLVLDGACWPTSSWQSPTLTMMALCRRAC
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LNIKKI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA