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The map label for this gene is 78779030

Identifier: 78779030

GI number: 78779030

Start: 609446

End: 610723

Strand: Reverse

Name: 78779030

Synonym: PMT9312_0645

Alternate gene names: NA

Gene position: 610723-609446 (Counterclockwise)

Preceding gene: 78779033

Following gene: 78779029

Centisome position: 35.73

GC content: 29.89

Gene sequence:

>1278_bases
GTGAAAAATAATAACTTGCTTGAAGTTCCTAACATTAACTCAAAAGATGCAAAATTAAAGAAATTAATTTATGACGTGGA
TAATTCCTTATTTAATGAGGATAACTATTCTAGGGAAAAATTCGAGCACCTTTGCGTATGTAGTGGAGGTACAACCTCTA
GCTGTGCAAAAAATGGTTTTACTACTCTTGATCTAAGAAAAAATCACTGCAAAATTCACCTAGATAGAAAAACCAATTTA
GTAACAATTGGAGGGGGAGTAATAATGGGGGATCTAGTAAATCATTTACAAAAACATAATCGAAGTTTTCCAATCGGACT
TTCTAAACTTCCTGGAGCAGGCTATATACTTACTGGTGGAGTAAGCCCGCTAAGTAGAACCTACGGCTTAGCCATTGATA
ATATTGAATCAATAAAAGGTTTCTTGGGTAATGGCACATTTATCTCTTTAAAAAAAAATCAAATAAATCCAGAAGAACAA
TTGATTTGGGAAGCAATTAAAGGCGCAGCACCCTTCTTCTCAATTATTACCGAAATAGAACTTAAGACTTTCCAATCTAA
TCCAATTAAAATTATTGAAGGATTTTTAAATCTAAATGAACTTTCAGAAATAATAAAAATATCAGAGGAATTTCCAGAAA
ATATTAGTCTTCAATGGATTTATGCCAAAAAAATTTACATATATATTTTTGCTGAACTCAAAAATAATTTAGAGGATAAA
ATAACAGAAGAATTCCTAATGCTTCTAGAGAAATTTCCTACTCTAGAAAAAAAATTTTATGAGAACTTTAACAAAATAAA
TTTCTTCCCAAAGGAATTGAATTTGTATGAGCTGAATGCAAATAACCATTCTGAGGTAATTAGTCTTCTTGGAGAAGATT
TAAAAAATGATATCCCAATTTTCATAAAATGTTTGGATGAAATAATGGATAATAAACCTAATAATTCCTGTTATGTTGCT
TCTCAACAATTAGGTTGCAAAACTAAAAATTTAAATCATGGCTCAAGCTTTTTTGTTCATAGAAAAAGCACTTGGAAACC
ATGGATATATGCATCATGGAAAAAAAATGATCTTCAAGAAAAAGAAATTGCTTTGGAATGGATTTATAAATCTTGGAGCA
AGCTAAAAATGTTTTATCCAAATGTTCACTTAGCCCAATTGCATAATCATTTGGATTCTCATGAGGAAGAAATTAAATTA
GCCTTTGGGAATAGAATGAATGAATTAAAAACTTTAAAGAATATTTTTGACCCACAAGGTATTTTGCCTCCTTTATGA

Upstream 100 bases:

>100_bases
CCACAAATAAGTATCGCGACTTGATTATTTAACTTCGAATCTAAATTATCCAAATTCAAATTATTACTTATAACATAATA
GTAAAGAACAATATCATGTA

Downstream 100 bases:

>100_bases
GGTAACTTCATAATTATAAAGAAAATCAAAATGTCAAATTTCTCAAGATATTTATCTAAAAATTGGTTAGATGATCCAAA
GTCAAATATTCTCTCTGGCT

Product: FAD linked oxidase, N-terminal

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKNNNLLEVPNINSKDAKLKKLIYDVDNSLFNEDNYSREKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHCKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTFQSNPIKIIEGFLNLNELSEIIKISEEFPENISLQWIYAKKIYIYIFAELKNNLEDK
ITEEFLMLLEKFPTLEKKFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLDEIMDNKPNNSCYVA
SQQLGCKTKNLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEIALEWIYKSWSKLKMFYPNVHLAQLHNHLDSHEEEIKL
AFGNRMNELKTLKNIFDPQGILPPL

Sequences:

>Translated_425_residues
MKNNNLLEVPNINSKDAKLKKLIYDVDNSLFNEDNYSREKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHCKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTFQSNPIKIIEGFLNLNELSEIIKISEEFPENISLQWIYAKKIYIYIFAELKNNLEDK
ITEEFLMLLEKFPTLEKKFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLDEIMDNKPNNSCYVA
SQQLGCKTKNLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEIALEWIYKSWSKLKMFYPNVHLAQLHNHLDSHEEEIKL
AFGNRMNELKTLKNIFDPQGILPPL
>Mature_425_residues
MKNNNLLEVPNINSKDAKLKKLIYDVDNSLFNEDNYSREKFEHLCVCSGGTTSSCAKNGFTTLDLRKNHCKIHLDRKTNL
VTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGGVSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQ
LIWEAIKGAAPFFSIITEIELKTFQSNPIKIIEGFLNLNELSEIIKISEEFPENISLQWIYAKKIYIYIFAELKNNLEDK
ITEEFLMLLEKFPTLEKKFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPIFIKCLDEIMDNKPNNSCYVA
SQQLGCKTKNLNHGSSFFVHRKSTWKPWIYASWKKNDLQEKEIALEWIYKSWSKLKMFYPNVHLAQLHNHLDSHEEEIKL
AFGNRMNELKTLKNIFDPQGILPPL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 48884; Mature: 48884

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNNLLEVPNINSKDAKLKKLIYDVDNSLFNEDNYSREKFEHLCVCSGGTTSSCAKNGF
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEECCCCCCHHHHCCC
TTLDLRKNHCKIHLDRKTNLVTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGG
EEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
VSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQLIWEAIKGAAPFFSIITEIE
CCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LKTFQSNPIKIIEGFLNLNELSEIIKISEEFPENISLQWIYAKKIYIYIFAELKNNLEDK
HHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEHHHHCCHHHH
ITEEFLMLLEKFPTLEKKFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPI
HHHHHHHHHHHCCCHHHHHHHCHHHCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHH
FIKCLDEIMDNKPNNSCYVASQQLGCKTKNLNHGSSFFVHRKSTWKPWIYASWKKNDLQE
HHHHHHHHHCCCCCCCEEEECHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHH
KEIALEWIYKSWSKLKMFYPNVHLAQLHNHLDSHEEEIKLAFGNRMNELKTLKNIFDPQG
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHEEHHHCCCHHHHHHHHHHCCCCC
ILPPL
CCCCC
>Mature Secondary Structure
MKNNNLLEVPNINSKDAKLKKLIYDVDNSLFNEDNYSREKFEHLCVCSGGTTSSCAKNGF
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEECCCCCCHHHHCCC
TTLDLRKNHCKIHLDRKTNLVTIGGGVIMGDLVNHLQKHNRSFPIGLSKLPGAGYILTGG
EEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
VSPLSRTYGLAIDNIESIKGFLGNGTFISLKKNQINPEEQLIWEAIKGAAPFFSIITEIE
CCHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LKTFQSNPIKIIEGFLNLNELSEIIKISEEFPENISLQWIYAKKIYIYIFAELKNNLEDK
HHHCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEHHHHCCHHHH
ITEEFLMLLEKFPTLEKKFYENFNKINFFPKELNLYELNANNHSEVISLLGEDLKNDIPI
HHHHHHHHHHHCCCHHHHHHHCHHHCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHH
FIKCLDEIMDNKPNNSCYVASQQLGCKTKNLNHGSSFFVHRKSTWKPWIYASWKKNDLQE
HHHHHHHHHCCCCCCCEEEECHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHH
KEIALEWIYKSWSKLKMFYPNVHLAQLHNHLDSHEEEIKLAFGNRMNELKTLKNIFDPQG
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHEEHHHCCCHHHHHHHHHHCCCCC
ILPPL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]