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The map label for this gene is psbH

Identifier: 78778638

GI number: 78778638

Start: 242479

End: 242679

Strand: Reverse

Name: psbH

Synonym: PMT9312_0253

Alternate gene names: 78778638

Gene position: 242679-242479 (Counterclockwise)

Preceding gene: 78778642

Following gene: 78778637

Centisome position: 14.2

GC content: 34.83

Gene sequence:

>201_bases
ATGGGTCAAAAAACAGCATTAGGAAGTCTTTTAAAAGCTATTGGCAATTCAGGTCAAGGAAAAGTTGTACCTGGTTGGGG
AGCAGTTCCTGTTATGACAGTCATAGGATTACTACTTCTGGTTTTTTTAGTTATTCTTCTACAAATTTATAATCAATCTC
TACTTTTACAAGGTTTCTCAGTAGATTGGAACGGAAACTAA

Upstream 100 bases:

>100_bases
GCAGATGATAAAGTTTGCATCAATTTTGCTAAGTTTGTAAACAATTTATGTATAAGTTCTTATACAATAGCGAAATAATA
TTCGATTTTGTGAATTCAAC

Downstream 100 bases:

>100_bases
CTTTCAGAAAGTATTTCAAAAAGTTTTCTAATTAATCCGAAAATTACTGGATAAATTTTTATTGGAATTTTTGTTTTAAT
TTCTAAGTATAGTTTGTTTA

Product: photosystem II reaction center protein H

Products: NA

Alternate protein names: PSII-H [H]

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MGQKTALGSLLKAIGNSGQGKVVPGWGAVPVMTVIGLLLLVFLVILLQIYNQSLLLQGFSVDWNGN

Sequences:

>Translated_66_residues
MGQKTALGSLLKAIGNSGQGKVVPGWGAVPVMTVIGLLLLVFLVILLQIYNQSLLLQGFSVDWNGN
>Mature_65_residues
GQKTALGSLLKAIGNSGQGKVVPGWGAVPVMTVIGLLLLVFLVILLQIYNQSLLLQGFSVDWNGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001056
- ProDom:   PD003584 [H]

Pfam domain/function: PF00737 PsbH [H]

EC number: NA

Molecular weight: Translated: 6952; Mature: 6821

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKTALGSLLKAIGNSGQGKVVPGWGAVPVMTVIGLLLLVFLVILLQIYNQSLLLQGFS
CCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
VDWNGN
CCCCCC
>Mature Secondary Structure 
GQKTALGSLLKAIGNSGQGKVVPGWGAVPVMTVIGLLLLVFLVILLQIYNQSLLLQGFS
CCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
VDWNGN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA