Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is txlA [H]
Identifier: 78778629
GI number: 78778629
Start: 236746
End: 237291
Strand: Direct
Name: txlA [H]
Synonym: PMT9312_0244
Alternate gene names: 78778629
Gene position: 236746-237291 (Clockwise)
Preceding gene: 78778627
Following gene: 78778633
Centisome position: 13.85
GC content: 29.49
Gene sequence:
>546_bases ATGCAATCTGATAGTAGAGAGCCACAGTTAAACGCAAATTTAAATTTAATAGTTGTTCTGCTTATTGTTTTTGTTATTGT TTCTTTGGTTTTGTTTAGAAATCTCTTTTTTCAATCAACTTACCTTCTCAAGAGTTTTGGAGAATTATCTGTTGAGCCGG AAATAGCTTTTAAAAACAAGAAACCTACTTTTCTTGAATTTTATGCAGAGTGGTGCGAAGTTTGTAAAGAAATGGCTCCA AAAGTATCTGCTTTAAAAGATGAATACGAAAAAGATATCAACTTTGTTTTTCTAAATGTTGATAATCAAAAATGGGAAAA TTACATCCGAAAATTTGAAGTCAATGGAATTCCTCAAGTTAATCTTTTTGATAGAGAAGGTAATTTAAAATCTACTTTTA TAGGTAAACAAGAAGAAATAACAATAAGAGAATCTTTAGCTTCTTTAAAGGGAGAGACAAAATCTCATGAAGAAATTCAT AGTGCTGAATTTTCAGTAATCAAACAAAAGAAAAATTATCAGGGTAATCCTCGTAGTCATGGATAG
Upstream 100 bases:
>100_bases ATTCTGTTCTTATCTTATCAGTTGATTAAAAGGTGACAGATTTAAATTCTCTTTATTTGTTTAACTTATTTAAAATGTTT TTAGTTAGTAAGTATTTATA
Downstream 100 bases:
>100_bases ATAATTCTTACCAATCTAAAGATTTTGATACAATCGGAAAACTGTCTTTAAAAATAGACTTACAATTTTGGGCAATAGAC TTGTGCTCTTCTTGAGTGCC
Product: thioredoxin-like protein TxlA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MQSDSREPQLNANLNLIVVLLIVFVIVSLVLFRNLFFQSTYLLKSFGELSVEPEIAFKNKKPTFLEFYAEWCEVCKEMAP KVSALKDEYEKDINFVFLNVDNQKWENYIRKFEVNGIPQVNLFDREGNLKSTFIGKQEEITIRESLASLKGETKSHEEIH SAEFSVIKQKKNYQGNPRSHG
Sequences:
>Translated_181_residues MQSDSREPQLNANLNLIVVLLIVFVIVSLVLFRNLFFQSTYLLKSFGELSVEPEIAFKNKKPTFLEFYAEWCEVCKEMAP KVSALKDEYEKDINFVFLNVDNQKWENYIRKFEVNGIPQVNLFDREGNLKSTFIGKQEEITIRESLASLKGETKSHEEIH SAEFSVIKQKKNYQGNPRSHG >Mature_181_residues MQSDSREPQLNANLNLIVVLLIVFVIVSLVLFRNLFFQSTYLLKSFGELSVEPEIAFKNKKPTFLEFYAEWCEVCKEMAP KVSALKDEYEKDINFVFLNVDNQKWENYIRKFEVNGIPQVNLFDREGNLKSTFIGKQEEITIRESLASLKGETKSHEEIH SAEFSVIKQKKNYQGNPRSHG
Specific function: Required for disulfide bond formation in some proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 21030; Mature: 21030
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDSREPQLNANLNLIVVLLIVFVIVSLVLFRNLFFQSTYLLKSFGELSVEPEIAFKNK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC KPTFLEFYAEWCEVCKEMAPKVSALKDEYEKDINFVFLNVDNQKWENYIRKFEVNGIPQV CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCE NLFDREGNLKSTFIGKQEEITIRESLASLKGETKSHEEIHSAEFSVIKQKKNYQGNPRSH EEECCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC G C >Mature Secondary Structure MQSDSREPQLNANLNLIVVLLIVFVIVSLVLFRNLFFQSTYLLKSFGELSVEPEIAFKNK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC KPTFLEFYAEWCEVCKEMAPKVSALKDEYEKDINFVFLNVDNQKWENYIRKFEVNGIPQV CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCE NLFDREGNLKSTFIGKQEEITIRESLASLKGETKSHEEIHSAEFSVIKQKKNYQGNPRSH EEECCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]