Click here to switch to the map view.

The map label for this gene is 78778418

Identifier: 78778418

GI number: 78778418

Start: 31573

End: 32085

Strand: Reverse

Name: 78778418

Synonym: PMT9312_0033

Alternate gene names: NA

Gene position: 32085-31573 (Counterclockwise)

Preceding gene: 78778420

Following gene: 78778417

Centisome position: 1.88

GC content: 38.4

Gene sequence:

>513_bases
ATGCCAAACATAAATCTAATCTATTATCTAATTGCAGGCGTTATCTTTGGAGCTTTAGCTCTAAAAACAGGTATTCCTGC
TGCTCCTCTTGCGGGTGCTTTAATAGGCGCAAGTATACTTAGCATTAGTGGCAAAGTCGAAATTGCAGAGTGGCCAATCG
GCACAAGAACGATTTTAGAAATCGGAATTGGAACAGTTATTGGTACATCATTAACCAAAGACTCATTAGTTGATCTTCAA
AGCTTATGGAGGCCTGCCATCTTAATAACATTTACTTTAGTTATTACGGGATTAGCAATTGGATTATGGACAAGCAGATT
ACTTAAGATAGATGTGATAACTACAATTCTAGGTGCCGCACCAGGAGGAATTAGCGGCATGAGTCTTGTAGGGTCAGAAT
ATGGAGTGGGAGCTGCAGTCGCAACTCTACACGCTGTAAGATTGATTACTGTGCTTCTAATTCTTCCTTTAATTGTGAAA
TGCTTATACTTATTTGGAGTAATAAAATCTTAA

Upstream 100 bases:

>100_bases
TAAAGGGGACATTACGAGAGGAAACCAAAAATATTATTTGAATATAAACTGAAACAAAAAAAATTTTTTCTAATATTATG
ACCAAACATCTTTCATATTT

Downstream 100 bases:

>100_bases
ATTTCTATAGACATATTCTTAATAAAAGATATTTTTAAATAGATGAAAAAAGTCTAATGAAAAGATTCAAGCAGAAAAAA
CAGATATTTTTAATTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPNINLIYYLIAGVIFGALALKTGIPAAPLAGALIGASILSISGKVEIAEWPIGTRTILEIGIGTVIGTSLTKDSLVDLQ
SLWRPAILITFTLVITGLAIGLWTSRLLKIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLIVK
CLYLFGVIKS

Sequences:

>Translated_170_residues
MPNINLIYYLIAGVIFGALALKTGIPAAPLAGALIGASILSISGKVEIAEWPIGTRTILEIGIGTVIGTSLTKDSLVDLQ
SLWRPAILITFTLVITGLAIGLWTSRLLKIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLIVK
CLYLFGVIKS
>Mature_169_residues
PNINLIYYLIAGVIFGALALKTGIPAAPLAGALIGASILSISGKVEIAEWPIGTRTILEIGIGTVIGTSLTKDSLVDLQS
LWRPAILITFTLVITGLAIGLWTSRLLKIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLIVKC
LYLFGVIKS

Specific function: Unknown

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17588; Mature: 17456

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNINLIYYLIAGVIFGALALKTGIPAAPLAGALIGASILSISGKVEIAEWPIGTRTILE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
IGIGTVIGTSLTKDSLVDLQSLWRPAILITFTLVITGLAIGLWTSRLLKIDVITTILGAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLIVKCLYLFGVIKS
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNINLIYYLIAGVIFGALALKTGIPAAPLAGALIGASILSISGKVEIAEWPIGTRTILE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
IGIGTVIGTSLTKDSLVDLQSLWRPAILITFTLVITGLAIGLWTSRLLKIDVITTILGAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLIVKCLYLFGVIKS
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA