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The map label for this gene is 78778417

Identifier: 78778417

GI number: 78778417

Start: 31106

End: 31516

Strand: Reverse

Name: 78778417

Synonym: PMT9312_0032

Alternate gene names: NA

Gene position: 31516-31106 (Counterclockwise)

Preceding gene: 78778418

Following gene: 78778416

Centisome position: 1.84

GC content: 31.63

Gene sequence:

>411_bases
ATGAAAAGATTCAAGCAGAAAAAACAGATATTTTTAATTTTAAGTATTTTAATGCCTTTAGCCCTTTCGACATTCAAAGT
GCATGCGGGCTCATTTGCAGCGGAAATTTTCTGTACTATGAGAGATGGAGGTAATGATCATGAAAGTAGTTGGGAGGCAG
CATATACGTATATAAAAAAGCAAAAAGGAGGAATTTTCAAAGTCTCACCTAAACAAGCAGCATCGCAAATTACTGAATCA
GTTATAAGAGATAAAGAAACCTTCAGCTACTGTGTTGAATACCTCGATAAACTTCATCCAAATAGAAAATTACTAAGAGA
ATTGGAAAAAGAAGAAGAAAGAAAAGAAAAAGAATTAGAAGAAACTAATGAAGATTTTTCAGAAGAAACAATTGAAAGAT
ACAGTTATTAA

Upstream 100 bases:

>100_bases
TAATTGTGAAATGCTTATACTTATTTGGAGTAATAAAATCTTAAATTTCTATAGACATATTCTTAATAAAAGATATTTTT
AAATAGATGAAAAAAGTCTA

Downstream 100 bases:

>100_bases
TTACGGCTTTGATTGTCTGCAATTTTTTTTGTATCTATTAACACTAAATTATATTTTTACGGGCTAATTTCAGCTAAAAA
ATAATAATTAAATATTGACT

Product: type II secretion system protein-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKRFKQKKQIFLILSILMPLALSTFKVHAGSFAAEIFCTMRDGGNDHESSWEAAYTYIKKQKGGIFKVSPKQAASQITES
VIRDKETFSYCVEYLDKLHPNRKLLRELEKEEERKEKELEETNEDFSEETIERYSY

Sequences:

>Translated_136_residues
MKRFKQKKQIFLILSILMPLALSTFKVHAGSFAAEIFCTMRDGGNDHESSWEAAYTYIKKQKGGIFKVSPKQAASQITES
VIRDKETFSYCVEYLDKLHPNRKLLRELEKEEERKEKELEETNEDFSEETIERYSY
>Mature_136_residues
MKRFKQKKQIFLILSILMPLALSTFKVHAGSFAAEIFCTMRDGGNDHESSWEAAYTYIKKQKGGIFKVSPKQAASQITES
VIRDKETFSYCVEYLDKLHPNRKLLRELEKEEERKEKELEETNEDFSEETIERYSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15998; Mature: 15998

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFKQKKQIFLILSILMPLALSTFKVHAGSFAAEIFCTMRDGGNDHESSWEAAYTYIKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QKGGIFKVSPKQAASQITESVIRDKETFSYCVEYLDKLHPNRKLLRELEKEEERKEKELE
HCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ETNEDFSEETIERYSY
HHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKRFKQKKQIFLILSILMPLALSTFKVHAGSFAAEIFCTMRDGGNDHESSWEAAYTYIKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QKGGIFKVSPKQAASQITESVIRDKETFSYCVEYLDKLHPNRKLLRELEKEEERKEKELE
HCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ETNEDFSEETIERYSY
HHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA