| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is murC [H]
Identifier: 78778407
GI number: 78778407
Start: 22584
End: 23993
Strand: Reverse
Name: murC [H]
Synonym: PMT9312_0022
Alternate gene names: 78778407
Gene position: 23993-22584 (Counterclockwise)
Preceding gene: 78778409
Following gene: 78778406
Centisome position: 1.4
GC content: 27.94
Gene sequence:
>1410_bases TTGGATAAAGAATTACTGTCGAAGAGTCATTTTCATTTTATTGGAATTGGAGGTATTGGAATGTCAGGAGTTGCAATAGG TTTGCTCAAAAAAGGTTATTCAGTTTCAGGATCTGATTTAGTTAAAAACAATGAAACTAATAAATTAGCGCAATTAGGCG CAGTAATCTTTAATTCTCAAATTCGACAGAATATTGAATTTGTAACTTCAAAATTTAACAACAAATTGATTAATTTTGTT GTAAGCTCCGCGATTAAGCCAGAAAATGAAGAATTTTCTTACTGTAGAAAAAAAAATTTAACAATAAAACATCGTTCAGA GATACTTGCAATGTTAATGCAAACCTACACTACATTGGCCGTAGCAGGTAGTCATGGAAAAACATCAACCAGTACATTTC TATCGACACTTCTTGAATTATGTACGCATAATTCTTCTTCAATAACTGGGGGAATAATTCCTATCTACAATTCTAATTGT CATTTAGCAAATACAAAATTCTTAGTAGCTGAAGTTGATGAATCTGATGGAACAATTAATAAATATAAATCTGATATTGG ATTAATTAATAACATTGATTTTGATCATTGCGATCATTTTTCTGATTTAGGTGAAGTTATATCTTCTTTTAAAGATTTCG CTGCAAATTCTAAAAAATTATTACTTAATTTTGATTGTGTAACTACCAGAAGTAATTTTTATTCTGAGAATAATTGGTCA AATATTACAGCCAATAAAGCAGCTTATGCCATAATCCCAACTGAAATTAATGAAAGTCATACAATTGGTAAATATTATGA AAATGGAAATTTCATTAGTAGTTTAGATATTCCAATCCCAGGATTACACAACCTATCTAATATCACAGCTGCAATAGCAG CTTCAAGAATGATAGGTGTAGATTTTTTAGAAATTAAAAAAAATATTAAATATCTTAAACTTCCAAAAAAAAGATTTGAA TTCAGAGGTCAAGTAGATGAAAGAAATTTATATGATGATTATGCACATCACCCAAACGAAATAAAAGCAACAATTAAATT AGGAAGATTATTTATTAATCACAAACGTAATAATGAATCACATAATGGAAGATTAATAGCAATATTTCAACCTCACAGAT ACTCTAGAGTAAAGCAATTTGCAAAAGAATTTGCTTTAGAATTATCAAAAGCAGATATTATTTACATAACTAGTATTTAT GCCGCAGGAGAAGGAAACGAAGATAACATTAATTCAACAATTATTACTGATCTGATATATAAACAAAACAAAAATGTTAG TTACATCAATAATTATCATGAAATTACAAAGAAGTTTTACGAATTAACTCAAAAAGGGGATTTGATTTTGAATATGGGAG CTGGAGATTGTCATAATTTCTGGTCAATTTTAAATGGTAAAAATAATTAA
Upstream 100 bases:
>100_bases TCTAGTTTTGTATTAATTCCAGGAAAAAAAACATTTTTTTTTAAGAAAAAATACCAAAAATTCGCTAAGAAGTTATTTTG ATTTAAGTAAAAGATAAAAA
Downstream 100 bases:
>100_bases ATTGATTTATGAATAAGAAAATTTTGTCTGAGAACTGTAATTTAAGTAATTATACAACTATAAAAGTTGGTGGAGTCGCA GAATATTTTGCTGAACCAAG
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MDKELLSKSHFHFIGIGGIGMSGVAIGLLKKGYSVSGSDLVKNNETNKLAQLGAVIFNSQIRQNIEFVTSKFNNKLINFV VSSAIKPENEEFSYCRKKNLTIKHRSEILAMLMQTYTTLAVAGSHGKTSTSTFLSTLLELCTHNSSSITGGIIPIYNSNC HLANTKFLVAEVDESDGTINKYKSDIGLINNIDFDHCDHFSDLGEVISSFKDFAANSKKLLLNFDCVTTRSNFYSENNWS NITANKAAYAIIPTEINESHTIGKYYENGNFISSLDIPIPGLHNLSNITAAIAASRMIGVDFLEIKKNIKYLKLPKKRFE FRGQVDERNLYDDYAHHPNEIKATIKLGRLFINHKRNNESHNGRLIAIFQPHRYSRVKQFAKEFALELSKADIIYITSIY AAGEGNEDNINSTIITDLIYKQNKNVSYINNYHEITKKFYELTQKGDLILNMGAGDCHNFWSILNGKNN
Sequences:
>Translated_469_residues MDKELLSKSHFHFIGIGGIGMSGVAIGLLKKGYSVSGSDLVKNNETNKLAQLGAVIFNSQIRQNIEFVTSKFNNKLINFV VSSAIKPENEEFSYCRKKNLTIKHRSEILAMLMQTYTTLAVAGSHGKTSTSTFLSTLLELCTHNSSSITGGIIPIYNSNC HLANTKFLVAEVDESDGTINKYKSDIGLINNIDFDHCDHFSDLGEVISSFKDFAANSKKLLLNFDCVTTRSNFYSENNWS NITANKAAYAIIPTEINESHTIGKYYENGNFISSLDIPIPGLHNLSNITAAIAASRMIGVDFLEIKKNIKYLKLPKKRFE FRGQVDERNLYDDYAHHPNEIKATIKLGRLFINHKRNNESHNGRLIAIFQPHRYSRVKQFAKEFALELSKADIIYITSIY AAGEGNEDNINSTIITDLIYKQNKNVSYINNYHEITKKFYELTQKGDLILNMGAGDCHNFWSILNGKNN >Mature_469_residues MDKELLSKSHFHFIGIGGIGMSGVAIGLLKKGYSVSGSDLVKNNETNKLAQLGAVIFNSQIRQNIEFVTSKFNNKLINFV VSSAIKPENEEFSYCRKKNLTIKHRSEILAMLMQTYTTLAVAGSHGKTSTSTFLSTLLELCTHNSSSITGGIIPIYNSNC HLANTKFLVAEVDESDGTINKYKSDIGLINNIDFDHCDHFSDLGEVISSFKDFAANSKKLLLNFDCVTTRSNFYSENNWS NITANKAAYAIIPTEINESHTIGKYYENGNFISSLDIPIPGLHNLSNITAAIAASRMIGVDFLEIKKNIKYLKLPKKRFE FRGQVDERNLYDDYAHHPNEIKATIKLGRLFINHKRNNESHNGRLIAIFQPHRYSRVKQFAKEFALELSKADIIYITSIY AAGEGNEDNINSTIITDLIYKQNKNVSYINNYHEITKKFYELTQKGDLILNMGAGDCHNFWSILNGKNN
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=475, Percent_Identity=28, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI1790680, Length=415, Percent_Identity=23.1325301204819, Blast_Score=118, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 52732; Mature: 52732
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKELLSKSHFHFIGIGGIGMSGVAIGLLKKGYSVSGSDLVKNNETNKLAQLGAVIFNSQ CCHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH IRQNIEFVTSKFNNKLINFVVSSAIKPENEEFSYCRKKNLTIKHRSEILAMLMQTYTTLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHEE VAGSHGKTSTSTFLSTLLELCTHNSSSITGGIIPIYNSNCHLANTKFLVAEVDESDGTIN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCEEEEEEECCCCCCHH KYKSDIGLINNIDFDHCDHFSDLGEVISSFKDFAANSKKLLLNFDCVTTRSNFYSENNWS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCC NITANKAAYAIIPTEINESHTIGKYYENGNFISSLDIPIPGLHNLSNITAAIAASRMIGV CEEECCEEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC DFLEIKKNIKYLKLPKKRFEFRGQVDERNLYDDYAHHPNEIKATIKLGRLFINHKRNNES HHHHHHHCCCEEECCHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHEEEHHEEECCCCCCC HNGRLIAIFQPHRYSRVKQFAKEFALELSKADIIYITSIYAAGEGNEDNINSTIITDLIY CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH KQNKNVSYINNYHEITKKFYELTQKGDLILNMGAGDCHNFWSILNGKNN HCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure MDKELLSKSHFHFIGIGGIGMSGVAIGLLKKGYSVSGSDLVKNNETNKLAQLGAVIFNSQ CCHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH IRQNIEFVTSKFNNKLINFVVSSAIKPENEEFSYCRKKNLTIKHRSEILAMLMQTYTTLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHEE VAGSHGKTSTSTFLSTLLELCTHNSSSITGGIIPIYNSNCHLANTKFLVAEVDESDGTIN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCEEEEEEECCCCCCHH KYKSDIGLINNIDFDHCDHFSDLGEVISSFKDFAANSKKLLLNFDCVTTRSNFYSENNWS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCC NITANKAAYAIIPTEINESHTIGKYYENGNFISSLDIPIPGLHNLSNITAAIAASRMIGV CEEECCEEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC DFLEIKKNIKYLKLPKKRFEFRGQVDERNLYDDYAHHPNEIKATIKLGRLFINHKRNNES HHHHHHHCCCEEECCHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHEEEHHEEECCCCCCC HNGRLIAIFQPHRYSRVKQFAKEFALELSKADIIYITSIYAAGEGNEDNINSTIITDLIY CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH KQNKNVSYINNYHEITKKFYELTQKGDLILNMGAGDCHNFWSILNGKNN HCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]