| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358465
Identifier: 78358465
GI number: 78358465
Start: 3389784
End: 3391100
Strand: Reverse
Name: 78358465
Synonym: Dde_3426
Alternate gene names: NA
Gene position: 3391100-3389784 (Counterclockwise)
Preceding gene: 78358466
Following gene: 78358464
Centisome position: 90.91
GC content: 49.28
Gene sequence:
>1317_bases ATGGAAGCTAAGACGCCTTTCTCTCAAGAGGATCTGAACGAAATCTTCAAGATTTCCCCTGCAGATCCGGAACGCGTGAT TTCAAGGGAAAGCAGCAGCCTTGAATTCAAGGAATCATTTGGGTGGGCAAGCTTGCCGAAGTACCTGAAAACAAGCGCCG CATATGCCAATGCCAAAGGCGGCTATATCGTGTTTGGCATTGCCAACAAGCCACACCGTCTTTGCGGTCTTTCCGGGGCT AACCTGAAGTTATTTGAGGATATTGATCCGGAGAAGATGTCTCGCAACTTCAATGAACACTTTGCTCCGGAAATAGAATG GACGATTCAGGAATATGAACTTCAAGGGAAGGTTTTTGGCCTTCTGTATATCCATGAGGCCAAGGACAAGCCGGTCGTCT GCACCAAAGATGCTGGGAAGGATCTGAAAGAGAGCGATATCTACTACCGATATCGAGGCCGCTCCGAGCGTATTAAATAC CCGGAACTCAGAGCCATCCTTGAGGCCAAGCGGGAAACTGAGCAGCGCCTATGGATGCAACATCTCGAGAACATAGCGCG GATCGGCGTTCGTGAGGCTGGGATTTTCGATCTGCACACCGGTAGCGTAACCGGGTCCGGAGGCTCGTTCCTCATTGATG AGTCACTTCTTAGTCAGCTTTTTTTCATCAAAGAGGGGGAGTTCTCTGAGGTCAAAGGCAAGCCCGCGCTAAAGCTGATC GGACATGTTGAACCCCTGGCTGGAAGCGTTATCGGTACGGTCAAAAAACAAATTGTAAAAACCAAAGGCATAAGGACGGC TGATATCGTTCTCAGCACTTTGAATCAGGATAATGTTCCTGAGCCAGACGAGTACATCAAACAGATCTGCTTTGAAAGCA CCGCATTTCTGCCCGTTTACTATTTCATCAAGAAATCCGGAATGACACTTGATAAAACCGTGGAAGTGCTCGAAGGCGTG GTTTCAAGATCAGCCACGCGAGGAAAACTGATTGAACGGTTGAAGAGTGGGAATACTCAGAAACTTGCAATCCCCAACGG AAGCACTGCCGCAGCCACCAAAAAGAGGAAATACGCAGAGGCGCTGCGAAGCAAAAAGGTCAACGCAGGCCTTACGGGGA AAGAGCTTGAATATTGCCTTCAAGCCATACGCGGACTGACGGCAGACGAGGTCAAATCCAACTCGAAGTATATCCGAGAG CTTTTGCGGAACTGGTTTAACAAACACTACGCATCGGCCAAAGGCCCACTGGCTGACAACCTGCGACGGGCGATCTGCTG GGTTGATGAAGCATTGAATATGGGAGACTGTAAATGA
Upstream 100 bases:
>100_bases ACGGTCAGCCTCAAACAGGCCATTGCGAACTGGCAGGAAAGCTCGATGGCATTGCGGGAGTCGATGGACGGCCTGCTTTC ATCATTAGAGGGAGGGCTGC
Downstream 100 bases:
>100_bases GCACACAATCCCTGAAGCCCGGCTGGAAGATGGTGAAGTTCGGCGAGGTGGTGAAGAACGCCAACCTCGTGGAGCGTGAG CCCGAGGCCAATGGCGTTGA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MEAKTPFSQEDLNEIFKISPADPERVISRESSSLEFKESFGWASLPKYLKTSAAYANAKGGYIVFGIANKPHRLCGLSGA NLKLFEDIDPEKMSRNFNEHFAPEIEWTIQEYELQGKVFGLLYIHEAKDKPVVCTKDAGKDLKESDIYYRYRGRSERIKY PELRAILEAKRETEQRLWMQHLENIARIGVREAGIFDLHTGSVTGSGGSFLIDESLLSQLFFIKEGEFSEVKGKPALKLI GHVEPLAGSVIGTVKKQIVKTKGIRTADIVLSTLNQDNVPEPDEYIKQICFESTAFLPVYYFIKKSGMTLDKTVEVLEGV VSRSATRGKLIERLKSGNTQKLAIPNGSTAAATKKRKYAEALRSKKVNAGLTGKELEYCLQAIRGLTADEVKSNSKYIRE LLRNWFNKHYASAKGPLADNLRRAICWVDEALNMGDCK
Sequences:
>Translated_438_residues MEAKTPFSQEDLNEIFKISPADPERVISRESSSLEFKESFGWASLPKYLKTSAAYANAKGGYIVFGIANKPHRLCGLSGA NLKLFEDIDPEKMSRNFNEHFAPEIEWTIQEYELQGKVFGLLYIHEAKDKPVVCTKDAGKDLKESDIYYRYRGRSERIKY PELRAILEAKRETEQRLWMQHLENIARIGVREAGIFDLHTGSVTGSGGSFLIDESLLSQLFFIKEGEFSEVKGKPALKLI GHVEPLAGSVIGTVKKQIVKTKGIRTADIVLSTLNQDNVPEPDEYIKQICFESTAFLPVYYFIKKSGMTLDKTVEVLEGV VSRSATRGKLIERLKSGNTQKLAIPNGSTAAATKKRKYAEALRSKKVNAGLTGKELEYCLQAIRGLTADEVKSNSKYIRE LLRNWFNKHYASAKGPLADNLRRAICWVDEALNMGDCK >Mature_438_residues MEAKTPFSQEDLNEIFKISPADPERVISRESSSLEFKESFGWASLPKYLKTSAAYANAKGGYIVFGIANKPHRLCGLSGA NLKLFEDIDPEKMSRNFNEHFAPEIEWTIQEYELQGKVFGLLYIHEAKDKPVVCTKDAGKDLKESDIYYRYRGRSERIKY PELRAILEAKRETEQRLWMQHLENIARIGVREAGIFDLHTGSVTGSGGSFLIDESLLSQLFFIKEGEFSEVKGKPALKLI GHVEPLAGSVIGTVKKQIVKTKGIRTADIVLSTLNQDNVPEPDEYIKQICFESTAFLPVYYFIKKSGMTLDKTVEVLEGV VSRSATRGKLIERLKSGNTQKLAIPNGSTAAATKKRKYAEALRSKKVNAGLTGKELEYCLQAIRGLTADEVKSNSKYIRE LLRNWFNKHYASAKGPLADNLRRAICWVDEALNMGDCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007421 [H]
Pfam domain/function: PF04326 AAA_4 [H]
EC number: NA
Molecular weight: Translated: 49207; Mature: 49207
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAKTPFSQEDLNEIFKISPADPERVISRESSSLEFKESFGWASLPKYLKTSAAYANAKG CCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC GYIVFGIANKPHRLCGLSGANLKLFEDIDPEKMSRNFNEHFAPEIEWTIQEYELQGKVFG CEEEEEECCCCCHHHCCCCCCEEEECCCCHHHHHCCHHHHCCCCCEEEHHHEEECCEEEE LLYIHEAKDKPVVCTKDAGKDLKESDIYYRYRGRSERIKYPELRAILEAKRETEQRLWMQ EEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH HLENIARIGVREAGIFDLHTGSVTGSGGSFLIDESLLSQLFFIKEGEFSEVKGKPALKLI HHHHHHHCCCCCCCEEEEECCCEECCCCCEEECHHHHHHHHHHCCCCHHHCCCCCHHHHH GHVEPLAGSVIGTVKKQIVKTKGIRTADIVLSTLNQDNVPEPDEYIKQICFESTAFLPVY HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH YFIKKSGMTLDKTVEVLEGVVSRSATRGKLIERLKSGNTQKLAIPNGSTAAATKKRKYAE HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH ALRSKKVNAGLTGKELEYCLQAIRGLTADEVKSNSKYIRELLRNWFNKHYASAKGPLADN HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH LRRAICWVDEALNMGDCK HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEAKTPFSQEDLNEIFKISPADPERVISRESSSLEFKESFGWASLPKYLKTSAAYANAKG CCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC GYIVFGIANKPHRLCGLSGANLKLFEDIDPEKMSRNFNEHFAPEIEWTIQEYELQGKVFG CEEEEEECCCCCHHHCCCCCCEEEECCCCHHHHHCCHHHHCCCCCEEEHHHEEECCEEEE LLYIHEAKDKPVVCTKDAGKDLKESDIYYRYRGRSERIKYPELRAILEAKRETEQRLWMQ EEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH HLENIARIGVREAGIFDLHTGSVTGSGGSFLIDESLLSQLFFIKEGEFSEVKGKPALKLI HHHHHHHCCCCCCCEEEEECCCEECCCCCEEECHHHHHHHHHHCCCCHHHCCCCCHHHHH GHVEPLAGSVIGTVKKQIVKTKGIRTADIVLSTLNQDNVPEPDEYIKQICFESTAFLPVY HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH YFIKKSGMTLDKTVEVLEGVVSRSATRGKLIERLKSGNTQKLAIPNGSTAAATKKRKYAE HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH ALRSKKVNAGLTGKELEYCLQAIRGLTADEVKSNSKYIRELLRNWFNKHYASAKGPLADN HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH LRRAICWVDEALNMGDCK HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]