| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is adhE [H]
Identifier: 78358323
GI number: 78358323
Start: 3274261
End: 3275766
Strand: Reverse
Name: adhE [H]
Synonym: Dde_3283
Alternate gene names: 78358323
Gene position: 3275766-3274261 (Counterclockwise)
Preceding gene: 78358324
Following gene: 78358322
Centisome position: 87.82
GC content: 60.23
Gene sequence:
>1506_bases ATGATTGTCGATAACGATCTGATTTCCATACAGGAAGCCAGAATTCTGGCAGAAAACGCAGGGCGCGCACAGCGGGTTCT GGCCACGTTTTCTCAGGAACAGCTGGACGAGATCGTCGAAGCCGTAGCCGAAGCCGTGGGGGCGCAGGCGCAAGCGCTTG CGGACATGGCGTACGAAGAAACCGACTACGGCAACCCGCATGACAAGGCAGTGAAAAACCGCTTTGTATGCACGCAGGTG CGCGAGCAGCTGCGCGGCATGCGGTGTGTCGGCGTCATCGGACGGGATGAGCACGCACGCACCATGGACATTGGTGTACC CGTAGGCGTCATTGCCGCGTTGTGTCCGGCGACCAGCCCCGTGTCCACAACCATCTGCAAGACGCTCATAGCCGTCAAAT CAGGCAACGCCGTAGTTTTTTCCCCTCATCCGCGCGCTGCCAGAAGCATAGCCGCCGCGCTTGATATCATGATTGATGCC GCGCGGGCTCACGGTCTGCCGGAAGGATGTCTTTCATACATGTCCACGGTAACCAAAAGCGGTACCGCCGAACTGATGAA CCATCCTGCCACATCGCTGGTCATGCTTTCGGGCGTGCCCGGCATGATAGGGCTTGCGCGCTGCAGCGGCAAACCCGTGA TTTACGGCGGCACCGGCAACGGGCCTGCATTTGTCGAACGCTCGGCCGACATCCGCCGCGCCGTGGCCGACATCATGCTC AGCAAGACGTTCGACAACGGTATCGCGCCGTCCGCGGAACAGTCCATCGTGGTCGATTCCTGCATCGAGCGGGAAGTCAG ACATGCCCTGCAGGAGTGCGGCGCATACTTCATGACGGACGAGGAGTCCCTGCGGCTGGCGGAGCTTCTTTTCTGTGCCG ACGGACGCCACAAAGCCGGCATGGTTGGTGTGTCTGCCCCGGTTCTGGCGCGCAGGGCAGGCATCAGCGTGCCCGACAAC GTGCGGCTGCTGGTGGCAGAACGTAAATATGTTTCCGAAGCAGACCCGTATTCAAGGGAACTGCTTTCCCCCGTCCTTGC CTATTACGTGGAGGACGACTGGATGCACGCCTGTGAAAAGTGCATCGAGCTGCTGCTCCACGAACGCAACGCTCATACTC TCGTGATCCATTCCAGTAACGAAGAGGTGATTTTGCAGTTTGCCCTGAAAAAACCTGTGGGCCGTCTGCTTGTAAACACT CCCGCCACATTCGGCGGCATGGGTGTGACCACCAATCTCTTCCCGTCCATGACGCTGGGCAGCGGGTCCGCAGGGCGCGG GATCACCGCCGACAACGTGTCGCCGATGAATCTCATCTACATACGCAAGGTCGGTTACGGCGTGCGGCAGTACACCGGCG CACAGGACGCCGCGGGATACGGTTCCCGCGTTTGCGCCGCGCAGGGCGTCATGGCCCCTCATGACAGCGATTCCAGAAAA ATGCAGGCGTTGCACCGGATCCTGATGGAAGCGATCGGGGTCATGGACGGGGCAGCACACAGATGA
Upstream 100 bases:
>100_bases GAATCTGCTGCCCTAGTGGTGACGGACAACGGGCAGCAGTGCGCACGGGGCGTTCTGAATGGTCGCCGCAAGGACACAGG AAACGGCAAAGGGGTAGATG
Downstream 100 bases:
>100_bases AGGAACTTATCCGTTAAAGGGAGGATGCAAAGTGGATCTCCAGGACTTTTCACATAAGCTCGCGGAAGCGACAAAGAACC TTACTCCGGCAGAACGTGCT
Product: acetaldehyde dehydrogenase-like
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MIVDNDLISIQEARILAENAGRAQRVLATFSQEQLDEIVEAVAEAVGAQAQALADMAYEETDYGNPHDKAVKNRFVCTQV REQLRGMRCVGVIGRDEHARTMDIGVPVGVIAALCPATSPVSTTICKTLIAVKSGNAVVFSPHPRAARSIAAALDIMIDA ARAHGLPEGCLSYMSTVTKSGTAELMNHPATSLVMLSGVPGMIGLARCSGKPVIYGGTGNGPAFVERSADIRRAVADIML SKTFDNGIAPSAEQSIVVDSCIEREVRHALQECGAYFMTDEESLRLAELLFCADGRHKAGMVGVSAPVLARRAGISVPDN VRLLVAERKYVSEADPYSRELLSPVLAYYVEDDWMHACEKCIELLLHERNAHTLVIHSSNEEVILQFALKKPVGRLLVNT PATFGGMGVTTNLFPSMTLGSGSAGRGITADNVSPMNLIYIRKVGYGVRQYTGAQDAAGYGSRVCAAQGVMAPHDSDSRK MQALHRILMEAIGVMDGAAHR
Sequences:
>Translated_501_residues MIVDNDLISIQEARILAENAGRAQRVLATFSQEQLDEIVEAVAEAVGAQAQALADMAYEETDYGNPHDKAVKNRFVCTQV REQLRGMRCVGVIGRDEHARTMDIGVPVGVIAALCPATSPVSTTICKTLIAVKSGNAVVFSPHPRAARSIAAALDIMIDA ARAHGLPEGCLSYMSTVTKSGTAELMNHPATSLVMLSGVPGMIGLARCSGKPVIYGGTGNGPAFVERSADIRRAVADIML SKTFDNGIAPSAEQSIVVDSCIEREVRHALQECGAYFMTDEESLRLAELLFCADGRHKAGMVGVSAPVLARRAGISVPDN VRLLVAERKYVSEADPYSRELLSPVLAYYVEDDWMHACEKCIELLLHERNAHTLVIHSSNEEVILQFALKKPVGRLLVNT PATFGGMGVTTNLFPSMTLGSGSAGRGITADNVSPMNLIYIRKVGYGVRQYTGAQDAAGYGSRVCAAQGVMAPHDSDSRK MQALHRILMEAIGVMDGAAHR >Mature_501_residues MIVDNDLISIQEARILAENAGRAQRVLATFSQEQLDEIVEAVAEAVGAQAQALADMAYEETDYGNPHDKAVKNRFVCTQV REQLRGMRCVGVIGRDEHARTMDIGVPVGVIAALCPATSPVSTTICKTLIAVKSGNAVVFSPHPRAARSIAAALDIMIDA ARAHGLPEGCLSYMSTVTKSGTAELMNHPATSLVMLSGVPGMIGLARCSGKPVIYGGTGNGPAFVERSADIRRAVADIML SKTFDNGIAPSAEQSIVVDSCIEREVRHALQECGAYFMTDEESLRLAELLFCADGRHKAGMVGVSAPVLARRAGISVPDN VRLLVAERKYVSEADPYSRELLSPVLAYYVEDDWMHACEKCIELLLHERNAHTLVIHSSNEEVILQFALKKPVGRLLVNT PATFGGMGVTTNLFPSMTLGSGSAGRGITADNVSPMNLIYIRKVGYGVRQYTGAQDAAGYGSRVCAAQGVMAPHDSDSRK MQALHRILMEAIGVMDGAAHR
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=443, Percent_Identity=37.020316027088, Blast_Score=278, Evalue=7e-76, Organism=Escherichia coli, GI1788797, Length=379, Percent_Identity=28.4960422163588, Blast_Score=118, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 53620; Mature: 53620
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDNDLISIQEARILAENAGRAQRVLATFSQEQLDEIVEAVAEAVGAQAQALADMAYEE CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC TDYGNPHDKAVKNRFVCTQVREQLRGMRCVGVIGRDEHARTMDIGVPVGVIAALCPATSP CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHCCCCCC VSTTICKTLIAVKSGNAVVFSPHPRAARSIAAALDIMIDAARAHGLPEGCLSYMSTVTKS HHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GTAELMNHPATSLVMLSGVPGMIGLARCSGKPVIYGGTGNGPAFVERSADIRRAVADIML CHHHHHCCCCHHEEEECCCCCHHHHHCCCCCCEEECCCCCCCHHEECHHHHHHHHHHHHH SKTFDNGIAPSAEQSIVVDSCIEREVRHALQECGAYFMTDEESLRLAELLFCADGRHKAG HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCC MVGVSAPVLARRAGISVPDNVRLLVAERKYVSEADPYSRELLSPVLAYYVEDDWMHACEK EEECCHHHHHHHCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHH CIELLLHERNAHTLVIHSSNEEVILQFALKKPVGRLLVNTPATFGGMGVTTNLFPSMTLG HHHHHHHCCCCCEEEEECCCCCEEEHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCCCCC SGSAGRGITADNVSPMNLIYIRKVGYGVRQYTGAQDAAGYGSRVCAAQGVMAPHDSDSRK CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHH MQALHRILMEAIGVMDGAAHR HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIVDNDLISIQEARILAENAGRAQRVLATFSQEQLDEIVEAVAEAVGAQAQALADMAYEE CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC TDYGNPHDKAVKNRFVCTQVREQLRGMRCVGVIGRDEHARTMDIGVPVGVIAALCPATSP CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHCCCCCC VSTTICKTLIAVKSGNAVVFSPHPRAARSIAAALDIMIDAARAHGLPEGCLSYMSTVTKS HHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GTAELMNHPATSLVMLSGVPGMIGLARCSGKPVIYGGTGNGPAFVERSADIRRAVADIML CHHHHHCCCCHHEEEECCCCCHHHHHCCCCCCEEECCCCCCCHHEECHHHHHHHHHHHHH SKTFDNGIAPSAEQSIVVDSCIEREVRHALQECGAYFMTDEESLRLAELLFCADGRHKAG HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCC MVGVSAPVLARRAGISVPDNVRLLVAERKYVSEADPYSRELLSPVLAYYVEDDWMHACEK EEECCHHHHHHHCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHH CIELLLHERNAHTLVIHSSNEEVILQFALKKPVGRLLVNTPATFGGMGVTTNLFPSMTLG HHHHHHHCCCCCEEEEECCCCCEEEHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCCCCC SGSAGRGITADNVSPMNLIYIRKVGYGVRQYTGAQDAAGYGSRVCAAQGVMAPHDSDSRK CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHH MQALHRILMEAIGVMDGAAHR HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]