Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78358291

Identifier: 78358291

GI number: 78358291

Start: 3249295

End: 3250449

Strand: Reverse

Name: 78358291

Synonym: Dde_3251

Alternate gene names: NA

Gene position: 3250449-3249295 (Counterclockwise)

Preceding gene: 78358292

Following gene: 78358290

Centisome position: 87.14

GC content: 45.11

Gene sequence:

>1155_bases
ATGAGAACCCTTAAGGTCCTGCATCTCGCCAGTTTTGATGGCAATATCGGTGATAATGCAAATCACAATGGCGTCCGGTT
TCTATGGAAAAAATATCTTCCGGAATATGATTTTGCCATTACTCCATTAGAGATGCGTGAGTATTTTTGGAAATGGAAGT
CTTTTGACGACGGCTTCGCTGACATGGTCAATGAGTACGACCTGTTTGTATGCGGCGGAGGGAACTATTTCGAACTGTGG
GTTCAAAGCTCCCCTACCGGAACCAGTGTGGCCATTCCTCTTGAAGTGCTGCGTAAAATAAAGACTCCTTGTCTTTTTTA
TGCGCTTGGTCTTGATCCATACATGGGAGCGCCGGATATATGCATTGAACGGTTTAAGCGTTTTCTGGACTATACGCTGG
CTTCTCCGCAGTTTCTTGTTTCGGTGCGCAATGACGGCTCGTTAGATTCTGCGCGGCGGGTGCTTGGCGGTGAGTACGCA
GACCGGATTCACCTGATGCCCGACGGAGGGCATTTTGTGCAACCGGAAGCCTGCACCCATTATGAGTTGACACCCGGTGC
CAGAACGATAGGTGTCAATCTTGCGGGAGATATGCTGGATTTCCGGTTTAAATCATGTAACGGAAAAAATTTAAATGACT
TTAAACGGTCTACGGCTGCTGTTCTTTGCGATATTATGCGGCGTATGCCCGATGTGAATTTGATATTTTATCCGCATATC
CATAAAGATTATAGTTTTCTGGCTGATTTTATCTGCGGAATTGACGATCATTTGCTCCGCAGGCGGATTACTGTTGCTCC
ATATCTGCATGGGCAGGGTGCTGAAAGGAAATTCTTTGACTTGTATAGACAGTGTGCACTCAATATCGGAACAAGACTGC
ACGCAAATATCTGTAGCGTGGGACTTAAGACTCCATCCATCGGCATTGTGACGCACGAGCAGATACATGAGCTTTACGGC
TATTATGGGATGGCTGAACGCGCTTTACGTTTTTCAGATGACAATTATGCTGCAAAGCTGGATGACCTGATTTCTGATTC
ATTAGAAAATACTGAAAGGATATCATGCAGATATTCAGATGTTATGAGTATGGTCACTAAAGATGCAGAGCGGTTTCTTG
GGATTATGAATTGCTGGTTGGATAGTGTTGTATGA

Upstream 100 bases:

>100_bases
ATGAGGAATGCAAAAGGTGTCCTGTGTGGAAATTGTGTAGCCGGAGGCGGTGTAGAGTACGAGCCCTTGGTGATGGAATT
CATGTCGAGGAGTAAGCGCC

Downstream 100 bases:

>100_bases
AGATTGTAATGTATCATTACATCAGAAAGCCCGATGCGAACTTTCCGTACTGGCGTTTTTTGCATGTTGACGACTTTCGT
CGCCAGCTGGATTTTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW
VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA
DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI
HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG
YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV

Sequences:

>Translated_384_residues
MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW
VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA
DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI
HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG
YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV
>Mature_384_residues
MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFADMVNEYDLFVCGGGNYFELW
VQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDICIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYA
DRIHLMPDGGHFVQPEACTHYELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI
HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSVGLKTPSIGIVTHEQIHELYG
YYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSDVMSMVTKDAERFLGIMNCWLDSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43863; Mature: 43863

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFA
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCHH
DMVNEYDLFVCGGGNYFELWVQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDI
HHHCCCEEEEECCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH
CIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYADRIHLMPDGGHFVQPEACTH
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCC
YELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI
EEECCCCEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSV
CCHHHHHHHHHHCCHHHHHHHHHEECCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHC
GLKTPSIGIVTHEQIHELYGYYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSD
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
VMSMVTKDAERFLGIMNCWLDSVV
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTLKVLHLASFDGNIGDNANHNGVRFLWKKYLPEYDFAITPLEMREYFWKWKSFDDGFA
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCHH
DMVNEYDLFVCGGGNYFELWVQSSPTGTSVAIPLEVLRKIKTPCLFYALGLDPYMGAPDI
HHHCCCEEEEECCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH
CIERFKRFLDYTLASPQFLVSVRNDGSLDSARRVLGGEYADRIHLMPDGGHFVQPEACTH
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCC
YELTPGARTIGVNLAGDMLDFRFKSCNGKNLNDFKRSTAAVLCDIMRRMPDVNLIFYPHI
EEECCCCEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
HKDYSFLADFICGIDDHLLRRRITVAPYLHGQGAERKFFDLYRQCALNIGTRLHANICSV
CCHHHHHHHHHHCCHHHHHHHHHEECCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHC
GLKTPSIGIVTHEQIHELYGYYGMAERALRFSDDNYAAKLDDLISDSLENTERISCRYSD
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
VMSMVTKDAERFLGIMNCWLDSVV
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA