| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ppsA [H]
Identifier: 78355651
GI number: 78355651
Start: 627197
End: 629683
Strand: Direct
Name: ppsA [H]
Synonym: Dde_0604
Alternate gene names: 78355651
Gene position: 627197-629683 (Clockwise)
Preceding gene: 78355650
Following gene: 78355652
Centisome position: 16.81
GC content: 60.96
Gene sequence:
>2487_bases ATGCCGCTTAAGGAACTCTTTCGGCACTGGACATATCAGGCGTTTGCGCCGGGCACTCTGCTGCGCAATAAGTATAATGC GTTCAAGGAACTGCTGCGGCTGGACGATGCCTGTCTGGAGCTGATAGCCGATCTGGAGGAAATTCATTACGGGCGCGAAA AAGCCGACTGGGCGCGCGTGGTATGGCTGACGGAAGAACTGGGCAGCACGGTGCGCGAGCTTATCGGTCAGTTGCAGGTT ATGAGCCCGGTGCGTTACATGGACCTGCTGGAATATTTTACAAAAATTGAATTTTATGCGCGCATGGCAGTCAGCGTGCC CGAACCGGAAATCATTCCTCCTTTTGTCATCCCGCTGGAAGAAGCCGGACTGCACGGCGGGCGTTCAGGAGGCAAGGCGC GCAATCTCGGGCGCATACTGCGTGAAACCTCGCTTCCTGTTCCTTCCGGCGTGGTGGTTTCCACTTCAGCTTTTCATTAT TTTATAGAATCCAATGACCTGCGCGGCCGTCTGGACAACCTGCTGTGCAGGCTGCGTCTGGACAGACCCGACGACATGGC GGAGCTTTCGGGTGAACTGCGCGGGCTTATCATTAATGCGGCCGTGCCGGAACGTCTGGCAGATGAAATAGAGATCGCCG CCATGGAACTGGCACGGGGCGGCCGCTTGCTGGCTGTGCGCAGCAGTGCCGTGGCCGAAGACGGTGAAGCCTCGTTTGCG GGGCAGTACGGGTCTGAGCTTAATGTGCGTCCTGCCGGTGTGCTTGATGCATGGAAGAGTGTGGTTGCGGGAAAATACAC CCCCCGCGCGTTGGCTTACCGCATCATGCACGGGCTGGCGGATGCCGAAACCCCCATGGCTGCCATCATCATGCCGATGG TTGACGCCGAGGCAAGCGGGGTGGTTTACACGCGTGACCCTTCTCCGCCCGCGTGTGCCGCGTGTGCCGACGGGGTACTG TCTGTTTTTGCCGTGCCCGGCGCCGGAGAATCTCTGGTCAGCGGCACCGCCGTGGCGCAGTCTGTATACTACCGGCGCGG TTCTCTGCGTCGTGCGGTGCCCCTGCGCGAAGACGCTGTGGTTCCCGCCCCCACGCTGCGCCGTCTGGCAACCATGGCCA TGGAGCTTGAAACCCTGTTCGGTGTTCCGCAGGATGTGGAATGGGCGGTGGACGGACGCAACAGGCTGCACATTCTGCAG AGCCGCCCCGTGCTGACAGCAGCCGTGGCGGAAGAAGCGGCCGATGAGCGTCAGCTGGCGGGAATGCAGGTGGTGCTTGA TGCGGCTGACTGCGCCTCGCCGGGATTCGGCAGCGGTGTGGTGTGTCAGGTGGAACACTGCGCCGAAGTGGATGACCTGC CGGAAGGCTCGGTGCTGGTCACCCGCAATCTGGGACCGGCGCTCACCCGCGTCATTGACAGGCTGAGCGCCGTGGTGGCC CGTCAGGGCAGCAGAGCCAGTCATTTCGCCTCGGTGGCGCGTGAATTCGGCCTGCCGGTCATCGTGGGGGTGGAGCAGGC GTTTTCGGCGCTTGCCGATGGCATGGAGGTAACCGTGGACGCCGCACGGGGCAGGGTATACTCGGGTTGCCCGGGCGGGG TATGCGGGCTGGAACGCGAAGAACGCCTTGCCGGTGTGCGGCCGCGGGTGCACGCCGGCGGCGGGGTGACCAGACGCATG GGCAAGGCCATGCAGCATATTTCGCGCCTCACATTGCTGGATGCGCAGTCCGAAACCTTTGCTCCGCGTTATTGCCGCTC GCTGCATGATTTTGTCCGCTTTGCGCACGAAAAAGGCGTGGCCGAAATGTTTTCGCTGGTGGGGCGTTCCGGCAGGGGGC TTGCCGGTGCCAAGCAGCTCAGGTCGCCGCTGCCCATTGCATTGTATGTGCTCAATCTGGAAGACGGTCTGTTTCCCACC GCTGCGGGCAAAAAGGAAATAACACCCGATGATGTGCGGTCGGTCCCCATGTGGGCGCTGTGGTTCGGGTTGTCTTCCGA CAAGGTGCAGTGGCATCAGGGGCTGCCCGCCATGGACTGGGAATCCTTTGACCGGGTGAGCGCAGGCGTCGGTGTGCGGG CGGATTCTCAGGATCTGGCAAGCTATGCCGTTGTTTCGCATACCTATATGCATTTCATGGCCCGCTTCGGCTATCATCTT TCCGTGGTTGATACGCTGTGCGAACAGAGCGGCAAGAATAATTATATCAATTTCAGGTTCAAGGGCGGCGGTGGCACGCC GGAACAGCGTTCCCTGAGACTGGGATTCATCCGTTCCGTGCTGGAGAAGCAGGGCTTTTTCATACAGATACGGGGCGATC TGCTGGATGCCCGGCATCCGCACGACGACGATACCGCCATTCAGAAGCAGCTGGCCATGCTGGGCTTGCTGCTGGCCAGA ACGCGTCTGATGGATATGACGCTGTTTGAGGGGGTGGATGTGGATGGTCTGGCTGCGGACTTTATGACGCTGCTGGAGGA CGAATGA
Upstream 100 bases:
>100_bases AAGCCCATCGACAAAGACGAGCTGGAAAGCAAGGTCAGCGATGTGCTGCGCGGCTGACGCTTAAGGACGGCACAGGCCGT CTTTGCCCACGGGAGCAGAT
Downstream 100 bases:
>100_bases GCTCCGGCACCAGCGGGGACGGCGTTGCGGTCCGCGGCGGATGCATGGCGCTGATCAGACGCGGGGTTCAGGCGCTGCGC TGCATGCTGGGTGACTTTAT
Product: pyruvate,water dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MPLKELFRHWTYQAFAPGTLLRNKYNAFKELLRLDDACLELIADLEEIHYGREKADWARVVWLTEELGSTVRELIGQLQV MSPVRYMDLLEYFTKIEFYARMAVSVPEPEIIPPFVIPLEEAGLHGGRSGGKARNLGRILRETSLPVPSGVVVSTSAFHY FIESNDLRGRLDNLLCRLRLDRPDDMAELSGELRGLIINAAVPERLADEIEIAAMELARGGRLLAVRSSAVAEDGEASFA GQYGSELNVRPAGVLDAWKSVVAGKYTPRALAYRIMHGLADAETPMAAIIMPMVDAEASGVVYTRDPSPPACAACADGVL SVFAVPGAGESLVSGTAVAQSVYYRRGSLRRAVPLREDAVVPAPTLRRLATMAMELETLFGVPQDVEWAVDGRNRLHILQ SRPVLTAAVAEEAADERQLAGMQVVLDAADCASPGFGSGVVCQVEHCAEVDDLPEGSVLVTRNLGPALTRVIDRLSAVVA RQGSRASHFASVAREFGLPVIVGVEQAFSALADGMEVTVDAARGRVYSGCPGGVCGLEREERLAGVRPRVHAGGGVTRRM GKAMQHISRLTLLDAQSETFAPRYCRSLHDFVRFAHEKGVAEMFSLVGRSGRGLAGAKQLRSPLPIALYVLNLEDGLFPT AAGKKEITPDDVRSVPMWALWFGLSSDKVQWHQGLPAMDWESFDRVSAGVGVRADSQDLASYAVVSHTYMHFMARFGYHL SVVDTLCEQSGKNNYINFRFKGGGGTPEQRSLRLGFIRSVLEKQGFFIQIRGDLLDARHPHDDDTAIQKQLAMLGLLLAR TRLMDMTLFEGVDVDGLAADFMTLLEDE
Sequences:
>Translated_828_residues MPLKELFRHWTYQAFAPGTLLRNKYNAFKELLRLDDACLELIADLEEIHYGREKADWARVVWLTEELGSTVRELIGQLQV MSPVRYMDLLEYFTKIEFYARMAVSVPEPEIIPPFVIPLEEAGLHGGRSGGKARNLGRILRETSLPVPSGVVVSTSAFHY FIESNDLRGRLDNLLCRLRLDRPDDMAELSGELRGLIINAAVPERLADEIEIAAMELARGGRLLAVRSSAVAEDGEASFA GQYGSELNVRPAGVLDAWKSVVAGKYTPRALAYRIMHGLADAETPMAAIIMPMVDAEASGVVYTRDPSPPACAACADGVL SVFAVPGAGESLVSGTAVAQSVYYRRGSLRRAVPLREDAVVPAPTLRRLATMAMELETLFGVPQDVEWAVDGRNRLHILQ SRPVLTAAVAEEAADERQLAGMQVVLDAADCASPGFGSGVVCQVEHCAEVDDLPEGSVLVTRNLGPALTRVIDRLSAVVA RQGSRASHFASVAREFGLPVIVGVEQAFSALADGMEVTVDAARGRVYSGCPGGVCGLEREERLAGVRPRVHAGGGVTRRM GKAMQHISRLTLLDAQSETFAPRYCRSLHDFVRFAHEKGVAEMFSLVGRSGRGLAGAKQLRSPLPIALYVLNLEDGLFPT AAGKKEITPDDVRSVPMWALWFGLSSDKVQWHQGLPAMDWESFDRVSAGVGVRADSQDLASYAVVSHTYMHFMARFGYHL SVVDTLCEQSGKNNYINFRFKGGGGTPEQRSLRLGFIRSVLEKQGFFIQIRGDLLDARHPHDDDTAIQKQLAMLGLLLAR TRLMDMTLFEGVDVDGLAADFMTLLEDE >Mature_827_residues PLKELFRHWTYQAFAPGTLLRNKYNAFKELLRLDDACLELIADLEEIHYGREKADWARVVWLTEELGSTVRELIGQLQVM SPVRYMDLLEYFTKIEFYARMAVSVPEPEIIPPFVIPLEEAGLHGGRSGGKARNLGRILRETSLPVPSGVVVSTSAFHYF IESNDLRGRLDNLLCRLRLDRPDDMAELSGELRGLIINAAVPERLADEIEIAAMELARGGRLLAVRSSAVAEDGEASFAG QYGSELNVRPAGVLDAWKSVVAGKYTPRALAYRIMHGLADAETPMAAIIMPMVDAEASGVVYTRDPSPPACAACADGVLS VFAVPGAGESLVSGTAVAQSVYYRRGSLRRAVPLREDAVVPAPTLRRLATMAMELETLFGVPQDVEWAVDGRNRLHILQS RPVLTAAVAEEAADERQLAGMQVVLDAADCASPGFGSGVVCQVEHCAEVDDLPEGSVLVTRNLGPALTRVIDRLSAVVAR QGSRASHFASVAREFGLPVIVGVEQAFSALADGMEVTVDAARGRVYSGCPGGVCGLEREERLAGVRPRVHAGGGVTRRMG KAMQHISRLTLLDAQSETFAPRYCRSLHDFVRFAHEKGVAEMFSLVGRSGRGLAGAKQLRSPLPIALYVLNLEDGLFPTA AGKKEITPDDVRSVPMWALWFGLSSDKVQWHQGLPAMDWESFDRVSAGVGVRADSQDLASYAVVSHTYMHFMARFGYHLS VVDTLCEQSGKNNYINFRFKGGGGTPEQRSLRLGFIRSVLEKQGFFIQIRGDLLDARHPHDDDTAIQKQLAMLGLLLART RLMDMTLFEGVDVDGLAADFMTLLEDE
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=456, Percent_Identity=28.7280701754386, Blast_Score=152, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17564524, Length=287, Percent_Identity=31.0104529616725, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 90405; Mature: 90273
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKELFRHWTYQAFAPGTLLRNKYNAFKELLRLDDACLELIADLEEIHYGREKADWARV CCHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE VWLTEELGSTVRELIGQLQVMSPVRYMDLLEYFTKIEFYARMAVSVPEPEIIPPFVIPLE EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHH EAGLHGGRSGGKARNLGRILRETSLPVPSGVVVSTSAFHYFIESNDLRGRLDNLLCRLRL HCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCHHHHHHHHHHHCC DRPDDMAELSGELRGLIINAAVPERLADEIEIAAMELARGGRLLAVRSSAVAEDGEASFA CCCCCHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCC GQYGSELNVRPAGVLDAWKSVVAGKYTPRALAYRIMHGLADAETPMAAIIMPMVDAEASG CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC VVYTRDPSPPACAACADGVLSVFAVPGAGESLVSGTAVAQSVYYRRGSLRRAVPLREDAV EEEECCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC VPAPTLRRLATMAMELETLFGVPQDVEWAVDGRNRLHILQSRPVLTAAVAEEAADERQLA CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC GMQVVLDAADCASPGFGSGVVCQVEHCAEVDDLPEGSVLVTRNLGPALTRVIDRLSAVVA CHHEEEEHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RQGSRASHFASVAREFGLPVIVGVEQAFSALADGMEVTVDAARGRVYSGCPGGVCGLERE CCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEHHCCCEECCCCCCCCCCCHH ERLAGVRPRVHAGGGVTRRMGKAMQHISRLTLLDAQSETFAPRYCRSLHDFVRFAHEKGV HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCH AEMFSLVGRSGRGLAGAKQLRSPLPIALYVLNLEDGLFPTAAGKKEITPDDVRSVPMWAL HHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHH WFGLSSDKVQWHQGLPAMDWESFDRVSAGVGVRADSQDLASYAVVSHTYMHFMARFGYHL EECCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH SVVDTLCEQSGKNNYINFRFKGGGGTPEQRSLRLGFIRSVLEKQGFFIQIRGDLLDARHP HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCC HDDDTAIQKQLAMLGLLLARTRLMDMTLFEGVDVDGLAADFMTLLEDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PLKELFRHWTYQAFAPGTLLRNKYNAFKELLRLDDACLELIADLEEIHYGREKADWARV CHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE VWLTEELGSTVRELIGQLQVMSPVRYMDLLEYFTKIEFYARMAVSVPEPEIIPPFVIPLE EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHH EAGLHGGRSGGKARNLGRILRETSLPVPSGVVVSTSAFHYFIESNDLRGRLDNLLCRLRL HCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCHHHHHHHHHHHCC DRPDDMAELSGELRGLIINAAVPERLADEIEIAAMELARGGRLLAVRSSAVAEDGEASFA CCCCCHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCC GQYGSELNVRPAGVLDAWKSVVAGKYTPRALAYRIMHGLADAETPMAAIIMPMVDAEASG CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC VVYTRDPSPPACAACADGVLSVFAVPGAGESLVSGTAVAQSVYYRRGSLRRAVPLREDAV EEEECCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC VPAPTLRRLATMAMELETLFGVPQDVEWAVDGRNRLHILQSRPVLTAAVAEEAADERQLA CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC GMQVVLDAADCASPGFGSGVVCQVEHCAEVDDLPEGSVLVTRNLGPALTRVIDRLSAVVA CHHEEEEHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RQGSRASHFASVAREFGLPVIVGVEQAFSALADGMEVTVDAARGRVYSGCPGGVCGLERE CCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEHHCCCEECCCCCCCCCCCHH ERLAGVRPRVHAGGGVTRRMGKAMQHISRLTLLDAQSETFAPRYCRSLHDFVRFAHEKGV HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCH AEMFSLVGRSGRGLAGAKQLRSPLPIALYVLNLEDGLFPTAAGKKEITPDDVRSVPMWAL HHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHH WFGLSSDKVQWHQGLPAMDWESFDRVSAGVGVRADSQDLASYAVVSHTYMHFMARFGYHL EECCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH SVVDTLCEQSGKNNYINFRFKGGGGTPEQRSLRLGFIRSVLEKQGFFIQIRGDLLDARHP HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCC HDDDTAIQKQLAMLGLLLARTRLMDMTLFEGVDVDGLAADFMTLLEDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]