Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355652
Identifier: 78355652
GI number: 78355652
Start: 629680
End: 630939
Strand: Direct
Name: 78355652
Synonym: Dde_0605
Alternate gene names: NA
Gene position: 629680-630939 (Clockwise)
Preceding gene: 78355651
Following gene: 78355653
Centisome position: 16.88
GC content: 62.86
Gene sequence:
>1260_bases ATGAGCTCCGGCACCAGCGGGGACGGCGTTGCGGTCCGCGGCGGATGCATGGCGCTGATCAGACGCGGGGTTCAGGCGCT GCGCTGCATGCTGGGTGACTTTATGAAACCGCAACGCCCCGCAGGTGCGCCGGAACCTCATCCTGACCTGCATGTATACT GGGTGACATCACGGCTGGGGGTGGGGGCGGCGCCCATGTCCCGCAGGCAGTTGCAGGCTCTGCGCGACATGGGGGTAAGC AGCATTCTGAACCTGTGTTCCGAACTGCCCGGTCTGGCAGACCTTGAGCGCGAAAACGGTTTCGACACATGGTATCTGCC TGTGGTTGATGAAGAAGCCCCCGCACTGGATGCACTGGAAGAAGCGCTGGAGTGGGTGGATGAATGCCTGTATCTGGGAA AACGGGTATACATTCACTGCCGTCACGGCATAGGGCGGACCGGCACGGTGCTTAATGCCTACCTGCTGCGGCGGGGGCTG GGGCACCGGCTGGCGGCGCGCACACTGCGCGGGTTACGTGCCAGACCGAGCAATTTTGACCAGTGGCGGCTGGTGCGCCG TTACGGCACGGTCAATGCCCCGCTCACGGTGCGTGCTCCTTCGCTGGAATGTCAGGGCGGGGTGGACCTTGCGCCGTACG TTGACGACTATCTGCTGCTCGAGGCCGAGGTAGAACGTCTGGCGCTGAAACGGCACGAAGGGCTGCCGCGCTGCGGCAGA GACCATGCCCGCTGCTGCAGTTCTCCTGTGGCTCTGACGCTTATCGAAGCGCTGACGCTGGGAACACGCATCAACACCGC GCTGTCCAGCGATATGCGCAGGCAGGTCATGGAGCGCGCCCTGACGGCTTCGCAGCAGGAAAGCAGCATCCGTGCGGATG TGGGTTCCGCGGCTTTTCCCGGTGCGCAGGACCCGTGCCTCACCGCCGAGCTGCTGTGTCCGCTTTCGGTTGAAGGGCAC TGCCTGCTGTATAATTACAGACCGCTGAAGTGCCGGCTTTTTGATGTGCCGGCTGACGATGCCTTCCGGCTGTGGGCAGA AGAACTTTCCGGCCCGCTGGGCAGGCTTTCCGAACACGTTTTCGTGGCGCTGGCGGGTGCCTTTCCTGCCAGCGAACTGC CGCGTTTTCCCCTTCCTGATGTTCTTTCCGGACGATATGTGCAGACGGTGTTTCATTGTCTGATGCGCAATGCCGCAGCC GACTGCACCCTGCCCGACGAGCCGGAAACAGACTGCCCTGTGCTTTCTCCTCCGGTGTAA
Upstream 100 bases:
>100_bases GCTTGCTGCTGGCCAGAACGCGTCTGATGGATATGACGCTGTTTGAGGGGGTGGATGTGGATGGTCTGGCTGCGGACTTT ATGACGCTGCTGGAGGACGA
Downstream 100 bases:
>100_bases GCAGTTACAGGGCCACTGCCGTCTGCTTTATGGGGACTTGCATTTTTTTCCCCGATGCTTACTCATTGGCTATGCCCCGT ACGATGCACGGTGCGGGCGG
Product: protein tyrosine phosphatase / dual specificity protein phosphatase
Products: NA
Alternate protein names: Protein Phosphatase; Phosphatase
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSSGTSGDGVAVRGGCMALIRRGVQALRCMLGDFMKPQRPAGAPEPHPDLHVYWVTSRLGVGAAPMSRRQLQALRDMGVS SILNLCSELPGLADLERENGFDTWYLPVVDEEAPALDALEEALEWVDECLYLGKRVYIHCRHGIGRTGTVLNAYLLRRGL GHRLAARTLRGLRARPSNFDQWRLVRRYGTVNAPLTVRAPSLECQGGVDLAPYVDDYLLLEAEVERLALKRHEGLPRCGR DHARCCSSPVALTLIEALTLGTRINTALSSDMRRQVMERALTASQQESSIRADVGSAAFPGAQDPCLTAELLCPLSVEGH CLLYNYRPLKCRLFDVPADDAFRLWAEELSGPLGRLSEHVFVALAGAFPASELPRFPLPDVLSGRYVQTVFHCLMRNAAA DCTLPDEPETDCPVLSPPV
Sequences:
>Translated_419_residues MSSGTSGDGVAVRGGCMALIRRGVQALRCMLGDFMKPQRPAGAPEPHPDLHVYWVTSRLGVGAAPMSRRQLQALRDMGVS SILNLCSELPGLADLERENGFDTWYLPVVDEEAPALDALEEALEWVDECLYLGKRVYIHCRHGIGRTGTVLNAYLLRRGL GHRLAARTLRGLRARPSNFDQWRLVRRYGTVNAPLTVRAPSLECQGGVDLAPYVDDYLLLEAEVERLALKRHEGLPRCGR DHARCCSSPVALTLIEALTLGTRINTALSSDMRRQVMERALTASQQESSIRADVGSAAFPGAQDPCLTAELLCPLSVEGH CLLYNYRPLKCRLFDVPADDAFRLWAEELSGPLGRLSEHVFVALAGAFPASELPRFPLPDVLSGRYVQTVFHCLMRNAAA DCTLPDEPETDCPVLSPPV >Mature_418_residues SSGTSGDGVAVRGGCMALIRRGVQALRCMLGDFMKPQRPAGAPEPHPDLHVYWVTSRLGVGAAPMSRRQLQALRDMGVSS ILNLCSELPGLADLERENGFDTWYLPVVDEEAPALDALEEALEWVDECLYLGKRVYIHCRHGIGRTGTVLNAYLLRRGLG HRLAARTLRGLRARPSNFDQWRLVRRYGTVNAPLTVRAPSLECQGGVDLAPYVDDYLLLEAEVERLALKRHEGLPRCGRD HARCCSSPVALTLIEALTLGTRINTALSSDMRRQVMERALTASQQESSIRADVGSAAFPGAQDPCLTAELLCPLSVEGHC LLYNYRPLKCRLFDVPADDAFRLWAEELSGPLGRLSEHVFVALAGAFPASELPRFPLPDVLSGRYVQTVFHCLMRNAAAD CTLPDEPETDCPVLSPPV
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45993; Mature: 45862
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGTSGDGVAVRGGCMALIRRGVQALRCMLGDFMKPQRPAGAPEPHPDLHVYWVTSRLG CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VGAAPMSRRQLQALRDMGVSSILNLCSELPGLADLERENGFDTWYLPVVDEEAPALDALE CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHH EALEWVDECLYLGKRVYIHCRHGIGRTGTVLNAYLLRRGLGHRLAARTLRGLRARPSNFD HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH QWRLVRRYGTVNAPLTVRAPSLECQGGVDLAPYVDDYLLLEAEVERLALKRHEGLPRCGR HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DHARCCSSPVALTLIEALTLGTRINTALSSDMRRQVMERALTASQQESSIRADVGSAAFP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAQDPCLTAELLCPLSVEGHCLLYNYRPLKCRLFDVPADDAFRLWAEELSGPLGRLSEHV CCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHH FVALAGAFPASELPRFPLPDVLSGRYVQTVFHCLMRNAAADCTLPDEPETDCPVLSPPV EEEEECCCCHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSGTSGDGVAVRGGCMALIRRGVQALRCMLGDFMKPQRPAGAPEPHPDLHVYWVTSRLG CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VGAAPMSRRQLQALRDMGVSSILNLCSELPGLADLERENGFDTWYLPVVDEEAPALDALE CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHH EALEWVDECLYLGKRVYIHCRHGIGRTGTVLNAYLLRRGLGHRLAARTLRGLRARPSNFD HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH QWRLVRRYGTVNAPLTVRAPSLECQGGVDLAPYVDDYLLLEAEVERLALKRHEGLPRCGR HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DHARCCSSPVALTLIEALTLGTRINTALSSDMRRQVMERALTASQQESSIRADVGSAAFP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GAQDPCLTAELLCPLSVEGHCLLYNYRPLKCRLFDVPADDAFRLWAEELSGPLGRLSEHV CCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHH FVALAGAFPASELPRFPLPDVLSGRYVQTVFHCLMRNAAADCTLPDEPETDCPVLSPPV EEEEECCCCHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA