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The map label for this gene is 78355608

Identifier: 78355608

GI number: 78355608

Start: 584937

End: 586616

Strand: Direct

Name: 78355608

Synonym: Dde_0561

Alternate gene names: NA

Gene position: 584937-586616 (Clockwise)

Preceding gene: 78355607

Following gene: 78355615

Centisome position: 15.68

GC content: 61.19

Gene sequence:

>1680_bases
ATGGACAGCAGATACGGGCTTTGCGTCAGGGGAGGTCTGTGCCGTGCGGCGGTGCGGGCGCTGCTGCTGGTGGCAGTGCT
GTGCGTAACGCCGGTGCTGGCGGCGGACGGCAAGACGCTGTACGGGCAGCATTGCGGCGTGTGCCATTCCGTGGGCGGCG
AAAATGATATCATGCCGCTCACCGCGCATTATCCGCTTATCGGCATGGATGCCAAAATTTCAGGCTTCGGGCGGTTATCC
GCGGCCATGCCGCCTTTTTCCGGTACGGTTGAAGAGCGCATGCTGGTGGCGGCGTATATTGTCAATGAACTGCATGGCGG
CGCGGTGGAAAACATTCCTGTGAAGCCTGCGGAACTGACGCTGGAAATACCCCCGTTCAATCCGGACAAGGACGAATATG
TTCTGCTGGCCTGGAACAATCTGGGCATGCACTGCATTTCGGACAGCTATTCCGAATGGGTGCTGCTGCCGCCCGCCAAT
GACATATGGGCGCAGCTCATCAGGCGCGGCGAACGCCCTTCGGTGGTCACGCAGGGCGTGATTCTGAGTTACTCCGTCGA
GGCCGGATTTGAAAAACCGGCGGAAAGGTCGACTTTCTGGCAGTATGCCGAAAGTCTTTTCGGGGTGCGGCCGCCGGATA
ACGTGGGGCTTTCGGGCAACGGCATGCAGGGAGTCATGAAGTTGCATGCGGACCTGAAAAGTTTTGAGGCCGCACTGATT
CCTGTGGAACCCTATCCGGCGCAGGGCGGCTACAACCCGTATCCGGTGTTCACCGTGCAGGCGCGTGACGTCGCCACAGG
CAGACTGCTGGCGGAAACAAAGACCGTGGCCCCCACCTCCACGGAAATGGGCTGCCGCAACTGCCACGGCGGTCCGTGGA
AGCATGAAAGCATCGCGGGCATATCGCAGGAGACCGGCCGCAATGTGCTGAAGGCGCATGACCGGCTGAGCGGCAGTGAA
CTGGCGGCGCTGGCTGACAAGGGAAAACCGCAGCTGTGTCAGATCTGCCATCCCGACCCGGTGCTCAATGCCAAAGGCGA
CCCCGCACTGCTCAATCTGCCTGCGGCCATACATGGTTTTCATGCCAATTATCTCACGGGCCGCGGGTCTGAAGCCTGTG
CCTACTGCCATCCCAACAATCCGCAGGGGCCCACGCGTTGTCTGCGCGGGGTGCACGCCACAGCCGGTATAGGCTGCGTG
AAATGTCACGGCTATATGGAAGACCACGCCATATCGCTGCTTAAAAAAGAGCAGGAAGCAGGCAAGGCCGGTGCGGCGCG
GCTGATGGAGCATTACGGTCCCCGTATGGTGGCCGGTACGGCCGATGTGGCGGCCCGCACGCCGTGGCTGCAGGAACCAG
ACTGCGCCACCTGCCATAAAGATTACCGCAACAGACCCGTGGCTGAGCAGGCCAATGCATTCAATGTGTGGACTGCCGGC
GGTGCGGAGCTGTACAGAAACAGGCCGGACGCCATGGGCGCTGTGATGTGCATTGCCTGCCATAACAGTCCGCATGCGTC
ATATCCCGCTGTCAACGCTTACGGACGCGACAGGGATAACATAGGCCCCATGCAGTACCAGAACGCACCCGGCCCCGTGG
GGGCGGGCGGTAACTGCGCCGTGTGTCACACCAGAATGATGCAGACCGACGCGCATCATATGGGCCGGACTGACGGCTAG

Upstream 100 bases:

>100_bases
CGACGGAATGTCGGCTGCCGGCGGACACGCGCGGAGCGGTGGGAGTCGCGCAGGCGGGTGCCGCCGTTTCAACCGGGCAT
GACATTAGTAAGGAGGTTGT

Downstream 100 bases:

>100_bases
CTGTCAGCTGTATTTGCCCGCGGTGCCGTTGTGCCGCGGGCTTTTTTGCTTTGCGGTGTGTTGCCGCAGACCGGGCGGAG
CGTGCGCCGGTGATTGTGCA

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome C Class I; Cytochrome Bd Ubiquinol Oxidase Subunit I; Cytochrome C Class III; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like; Cytochrome Bd-Type Quinol Oxidase Subunit 1-Like Protein

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MDSRYGLCVRGGLCRAAVRALLLVAVLCVTPVLAADGKTLYGQHCGVCHSVGGENDIMPLTAHYPLIGMDAKISGFGRLS
AAMPPFSGTVEERMLVAAYIVNELHGGAVENIPVKPAELTLEIPPFNPDKDEYVLLAWNNLGMHCISDSYSEWVLLPPAN
DIWAQLIRRGERPSVVTQGVILSYSVEAGFEKPAERSTFWQYAESLFGVRPPDNVGLSGNGMQGVMKLHADLKSFEAALI
PVEPYPAQGGYNPYPVFTVQARDVATGRLLAETKTVAPTSTEMGCRNCHGGPWKHESIAGISQETGRNVLKAHDRLSGSE
LAALADKGKPQLCQICHPDPVLNAKGDPALLNLPAAIHGFHANYLTGRGSEACAYCHPNNPQGPTRCLRGVHATAGIGCV
KCHGYMEDHAISLLKKEQEAGKAGAARLMEHYGPRMVAGTADVAARTPWLQEPDCATCHKDYRNRPVAEQANAFNVWTAG
GAELYRNRPDAMGAVMCIACHNSPHASYPAVNAYGRDRDNIGPMQYQNAPGPVGAGGNCAVCHTRMMQTDAHHMGRTDG

Sequences:

>Translated_559_residues
MDSRYGLCVRGGLCRAAVRALLLVAVLCVTPVLAADGKTLYGQHCGVCHSVGGENDIMPLTAHYPLIGMDAKISGFGRLS
AAMPPFSGTVEERMLVAAYIVNELHGGAVENIPVKPAELTLEIPPFNPDKDEYVLLAWNNLGMHCISDSYSEWVLLPPAN
DIWAQLIRRGERPSVVTQGVILSYSVEAGFEKPAERSTFWQYAESLFGVRPPDNVGLSGNGMQGVMKLHADLKSFEAALI
PVEPYPAQGGYNPYPVFTVQARDVATGRLLAETKTVAPTSTEMGCRNCHGGPWKHESIAGISQETGRNVLKAHDRLSGSE
LAALADKGKPQLCQICHPDPVLNAKGDPALLNLPAAIHGFHANYLTGRGSEACAYCHPNNPQGPTRCLRGVHATAGIGCV
KCHGYMEDHAISLLKKEQEAGKAGAARLMEHYGPRMVAGTADVAARTPWLQEPDCATCHKDYRNRPVAEQANAFNVWTAG
GAELYRNRPDAMGAVMCIACHNSPHASYPAVNAYGRDRDNIGPMQYQNAPGPVGAGGNCAVCHTRMMQTDAHHMGRTDG
>Mature_559_residues
MDSRYGLCVRGGLCRAAVRALLLVAVLCVTPVLAADGKTLYGQHCGVCHSVGGENDIMPLTAHYPLIGMDAKISGFGRLS
AAMPPFSGTVEERMLVAAYIVNELHGGAVENIPVKPAELTLEIPPFNPDKDEYVLLAWNNLGMHCISDSYSEWVLLPPAN
DIWAQLIRRGERPSVVTQGVILSYSVEAGFEKPAERSTFWQYAESLFGVRPPDNVGLSGNGMQGVMKLHADLKSFEAALI
PVEPYPAQGGYNPYPVFTVQARDVATGRLLAETKTVAPTSTEMGCRNCHGGPWKHESIAGISQETGRNVLKAHDRLSGSE
LAALADKGKPQLCQICHPDPVLNAKGDPALLNLPAAIHGFHANYLTGRGSEACAYCHPNNPQGPTRCLRGVHATAGIGCV
KCHGYMEDHAISLLKKEQEAGKAGAARLMEHYGPRMVAGTADVAARTPWLQEPDCATCHKDYRNRPVAEQANAFNVWTAG
GAELYRNRPDAMGAVMCIACHNSPHASYPAVNAYGRDRDNIGPMQYQNAPGPVGAGGNCAVCHTRMMQTDAHHMGRTDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60004; Mature: 60004

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRYGLCVRGGLCRAAVRALLLVAVLCVTPVLAADGKTLYGQHCGVCHSVGGENDIMPL
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCCEEE
TAHYPLIGMDAKISGFGRLSAAMPPFSGTVEERMLVAAYIVNELHGGAVENIPVKPAELT
EECCCEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
LEIPPFNPDKDEYVLLAWNNLGMHCISDSYSEWVLLPPANDIWAQLIRRGERPSVVTQGV
EECCCCCCCCCCEEEEEECCCCCEEECCCCCCEEEECCCHHHHHHHHHCCCCCCCEECCE
ILSYSVEAGFEKPAERSTFWQYAESLFGVRPPDNVGLSGNGMQGVMKLHADLKSFEAALI
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
PVEPYPAQGGYNPYPVFTVQARDVATGRLLAETKTVAPTSTEMGCRNCHGGPWKHESIAG
ECCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCHHCC
ISQETGRNVLKAHDRLSGSELAALADKGKPQLCQICHPDPVLNAKGDPALLNLPAAIHGF
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCHHHHCC
HANYLTGRGSEACAYCHPNNPQGPTRCLRGVHATAGIGCVKCHGYMEDHAISLLKKEQEA
CCCEECCCCCCEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHHH
GKAGAARLMEHYGPRMVAGTADVAARTPWLQEPDCATCHKDYRNRPVAEQANAFNVWTAG
CHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHCCEEEEEECC
GAELYRNRPDAMGAVMCIACHNSPHASYPAVNAYGRDRDNIGPMQYQNAPGPVGAGGNCA
CHHHHHCCCCHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VCHTRMMQTDAHHMGRTDG
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDSRYGLCVRGGLCRAAVRALLLVAVLCVTPVLAADGKTLYGQHCGVCHSVGGENDIMPL
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCCEEE
TAHYPLIGMDAKISGFGRLSAAMPPFSGTVEERMLVAAYIVNELHGGAVENIPVKPAELT
EECCCEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
LEIPPFNPDKDEYVLLAWNNLGMHCISDSYSEWVLLPPANDIWAQLIRRGERPSVVTQGV
EECCCCCCCCCCEEEEEECCCCCEEECCCCCCEEEECCCHHHHHHHHHCCCCCCCEECCE
ILSYSVEAGFEKPAERSTFWQYAESLFGVRPPDNVGLSGNGMQGVMKLHADLKSFEAALI
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
PVEPYPAQGGYNPYPVFTVQARDVATGRLLAETKTVAPTSTEMGCRNCHGGPWKHESIAG
ECCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCCCHHCC
ISQETGRNVLKAHDRLSGSELAALADKGKPQLCQICHPDPVLNAKGDPALLNLPAAIHGF
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCHHHHCC
HANYLTGRGSEACAYCHPNNPQGPTRCLRGVHATAGIGCVKCHGYMEDHAISLLKKEQEA
CCCEECCCCCCEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHHH
GKAGAARLMEHYGPRMVAGTADVAARTPWLQEPDCATCHKDYRNRPVAEQANAFNVWTAG
CHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHCCEEEEEECC
GAELYRNRPDAMGAVMCIACHNSPHASYPAVNAYGRDRDNIGPMQYQNAPGPVGAGGNCA
CHHHHHCCCCHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VCHTRMMQTDAHHMGRTDG
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA