Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 78355607

GI number: 78355607

Start: 582979

End: 584499

Strand: Direct

Name: ftsY [H]

Synonym: Dde_0560

Alternate gene names: 78355607

Gene position: 582979-584499 (Clockwise)

Preceding gene: 78355604

Following gene: 78355608

Centisome position: 15.63

GC content: 59.43

Gene sequence:

>1521_bases
ATGGGTTTTTTCAGCAAGCTGAAGCGGTTCTGGGGTGGGGCGGAGACTCCTGCCCCTGAAGAAGCCGGAAAGCGCGACGC
CGCCGCGCAGCCGGAAACGCAGGTATCTCCGGAAGAATCGTCCGGTGATGCGTTGTCTGATGACGCACCGCATGACACTG
CCTCTGCAGAGGCGGAGCAGGCAGACATACAGGCCGCGGCCCAACGCGGCGGCGTAGCGGAACAGCCGCATGCCGCAGCA
GCCGGAGATGCGGAGGATATGCCCGCCGCCGCTACGCCGCAGGCTGCACAGGTTGCGCAGCAGGCGGCTGATGCAGCCCC
CGTCTGGCAGACGGAGCTTACGCTGGCGCTGCGCGGGGCCGAACCGCGGCTGAGCGTCTGGCTGGGGCATGTGCTGCAGG
GCATAGACCGTGCCGGTGACGAGCTGTGGGATCGCCTGCTGTTCTTTTTCCGCGCTCTGGATGCTCCGGCGGATGAGGCA
TCGGCCTTTGTGGGTAATTTCCGCAAATGGCTTGATGACATGGAATACGAACGGGTGGAGGATTTCCGCTCGGAACTGCA
GTACCGTCTTGCACTGGCGCTGGAGCTGGAAGACGAGGAAGACGAGCGCAACAGACTTTTTCTGAAGCTTTCAGAGGGGC
TTACCAGAACAAAAGAGCAGATAACGCGTCGTATCGACGGTCTGCTTTCGGCACATAAGCAGATAGATGAAGCCTTCTGG
GAGGAACTGGAAGAGATTCTTATCATGGCGGATGTGGGGTACGAACCGGCCATGGAGCTTGTGGGCAGACTGCGCGCACG
GGTACGCGCCTCAGGTTCTGATGATCCTGCACTGTTCAAGGAACTGATGCGCGAGGAGCTGGAAGATATTTTCAGGACGC
CGCGCCGTATAGCCGCCATCAATCCGCCTGAAGTGGTGCTGATGGTGGGCGTGAACGGTGTGGGAAAAACCACCACCATA
GCCAAGCTGGCCTATCGGGCGCGTCTGCAGGGTAAAAAAGTGCTTATCGCCGCAGGTGATACGTTCCGTGCGGCGGCCAT
TGAACAGCTTAAGGTGTGGGCCGACCGTGTGGGGGCAGGCTTTCACTCCAAGGGTGCCAATGCGGACCCCGCAGCCGTGG
CCTACGAAGCCATGGATAAAGCCGTGAAGGAAGGATATGACATCCTTTTTGTCGATACGGCGGGGCGCATTCATACCAAG
GTGAATCTGATGGAAGAGCTGCAGAAAATACGGGGCGTGCTGGGCAAAAAGCATCCTGGAGCACCGCACCGTTCCATTCT
GGTCATTGACGCCACAACAGGCCAGAACGCTCTTTCGCAGACCAGACTTTTTGACGAGTCGTGCAAGCTGGATGAAATTG
TCCTCACCAAGCTGGACGGCACGGCCAAAGGCGGCATTGTGGTGGCCGTGGCCATGCAGTTCGGCATACCCATTACCTAT
GTGGGGCTGGGCGAAAAAATGGAAGACCTGCGCCCCTTTGACGGCAGGGATTTTGCGCAGGCCCTGCTGGGATCAGACTG
A

Upstream 100 bases:

>100_bases
AAAGAAATGCGTTTCGGGTCATTGTCAGTGTTGCAGTTGTGCACCGGGCCGTAACTGAATGATGTGCGGTGACGGTGTTT
GAATTTTTTGAGGAGCGAAG

Downstream 100 bases:

>100_bases
TCGCGGCGTGATACAGGGTTCTGCTTTGCAGAACTGACGCCCTTTGCATATTCCGCAGTACGCCGGAGAAGTATTGGCTT
CTCCGGCGTTTTTTTGCGTC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MGFFSKLKRFWGGAETPAPEEAGKRDAAAQPETQVSPEESSGDALSDDAPHDTASAEAEQADIQAAAQRGGVAEQPHAAA
AGDAEDMPAAATPQAAQVAQQAADAAPVWQTELTLALRGAEPRLSVWLGHVLQGIDRAGDELWDRLLFFFRALDAPADEA
SAFVGNFRKWLDDMEYERVEDFRSELQYRLALALELEDEEDERNRLFLKLSEGLTRTKEQITRRIDGLLSAHKQIDEAFW
EELEEILIMADVGYEPAMELVGRLRARVRASGSDDPALFKELMREELEDIFRTPRRIAAINPPEVVLMVGVNGVGKTTTI
AKLAYRARLQGKKVLIAAGDTFRAAAIEQLKVWADRVGAGFHSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTK
VNLMEELQKIRGVLGKKHPGAPHRSILVIDATTGQNALSQTRLFDESCKLDEIVLTKLDGTAKGGIVVAVAMQFGIPITY
VGLGEKMEDLRPFDGRDFAQALLGSD

Sequences:

>Translated_506_residues
MGFFSKLKRFWGGAETPAPEEAGKRDAAAQPETQVSPEESSGDALSDDAPHDTASAEAEQADIQAAAQRGGVAEQPHAAA
AGDAEDMPAAATPQAAQVAQQAADAAPVWQTELTLALRGAEPRLSVWLGHVLQGIDRAGDELWDRLLFFFRALDAPADEA
SAFVGNFRKWLDDMEYERVEDFRSELQYRLALALELEDEEDERNRLFLKLSEGLTRTKEQITRRIDGLLSAHKQIDEAFW
EELEEILIMADVGYEPAMELVGRLRARVRASGSDDPALFKELMREELEDIFRTPRRIAAINPPEVVLMVGVNGVGKTTTI
AKLAYRARLQGKKVLIAAGDTFRAAAIEQLKVWADRVGAGFHSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTK
VNLMEELQKIRGVLGKKHPGAPHRSILVIDATTGQNALSQTRLFDESCKLDEIVLTKLDGTAKGGIVVAVAMQFGIPITY
VGLGEKMEDLRPFDGRDFAQALLGSD
>Mature_505_residues
GFFSKLKRFWGGAETPAPEEAGKRDAAAQPETQVSPEESSGDALSDDAPHDTASAEAEQADIQAAAQRGGVAEQPHAAAA
GDAEDMPAAATPQAAQVAQQAADAAPVWQTELTLALRGAEPRLSVWLGHVLQGIDRAGDELWDRLLFFFRALDAPADEAS
AFVGNFRKWLDDMEYERVEDFRSELQYRLALALELEDEEDERNRLFLKLSEGLTRTKEQITRRIDGLLSAHKQIDEAFWE
ELEEILIMADVGYEPAMELVGRLRARVRASGSDDPALFKELMREELEDIFRTPRRIAAINPPEVVLMVGVNGVGKTTTIA
KLAYRARLQGKKVLIAAGDTFRAAAIEQLKVWADRVGAGFHSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTKV
NLMEELQKIRGVLGKKHPGAPHRSILVIDATTGQNALSQTRLFDESCKLDEIVLTKLDGTAKGGIVVAVAMQFGIPITYV
GLGEKMEDLRPFDGRDFAQALLGSD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=287, Percent_Identity=30.6620209059233, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI226371618, Length=201, Percent_Identity=34.8258706467662, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI23308697, Length=305, Percent_Identity=30.4918032786885, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI295424842, Length=305, Percent_Identity=30.4918032786885, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=32.3529411764706, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1789874, Length=314, Percent_Identity=46.8152866242038, Blast_Score=243, Evalue=3e-65,
Organism=Escherichia coli, GI1788963, Length=306, Percent_Identity=33.6601307189542, Blast_Score=152, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=201, Percent_Identity=34.3283582089552, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=32.7702702702703, Blast_Score=122, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6325345, Length=310, Percent_Identity=31.6129032258064, Blast_Score=149, Evalue=7e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=220, Percent_Identity=30, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17647949, Length=301, Percent_Identity=33.2225913621262, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641198, Length=386, Percent_Identity=29.7927461139896, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 55276; Mature: 55145

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFSKLKRFWGGAETPAPEEAGKRDAAAQPETQVSPEESSGDALSDDAPHDTASAEAEQ
CCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ADIQAAAQRGGVAEQPHAAAAGDAEDMPAAATPQAAQVAQQAADAAPVWQTELTLALRGA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEECC
EPRLSVWLGHVLQGIDRAGDELWDRLLFFFRALDAPADEASAFVGNFRKWLDDMEYERVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DFRSELQYRLALALELEDEEDERNRLFLKLSEGLTRTKEQITRRIDGLLSAHKQIDEAFW
HHHHHHHHHHHEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELEEILIMADVGYEPAMELVGRLRARVRASGSDDPALFKELMREELEDIFRTPRRIAAI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEC
NPPEVVLMVGVNGVGKTTTIAKLAYRARLQGKKVLIAAGDTFRAAAIEQLKVWADRVGAG
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
FHSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTKVNLMEELQKIRGVLGKKHPG
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
APHRSILVIDATTGQNALSQTRLFDESCKLDEIVLTKLDGTAKGGIVVAVAMQFGIPITY
CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCCEEEEEEHHHCCCEEE
VGLGEKMEDLRPFDGRDFAQALLGSD
EECCCHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GFFSKLKRFWGGAETPAPEEAGKRDAAAQPETQVSPEESSGDALSDDAPHDTASAEAEQ
CHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ADIQAAAQRGGVAEQPHAAAAGDAEDMPAAATPQAAQVAQQAADAAPVWQTELTLALRGA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEECC
EPRLSVWLGHVLQGIDRAGDELWDRLLFFFRALDAPADEASAFVGNFRKWLDDMEYERVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DFRSELQYRLALALELEDEEDERNRLFLKLSEGLTRTKEQITRRIDGLLSAHKQIDEAFW
HHHHHHHHHHHEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELEEILIMADVGYEPAMELVGRLRARVRASGSDDPALFKELMREELEDIFRTPRRIAAI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEC
NPPEVVLMVGVNGVGKTTTIAKLAYRARLQGKKVLIAAGDTFRAAAIEQLKVWADRVGAG
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
FHSKGANADPAAVAYEAMDKAVKEGYDILFVDTAGRIHTKVNLMEELQKIRGVLGKKHPG
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
APHRSILVIDATTGQNALSQTRLFDESCKLDEIVLTKLDGTAKGGIVVAVAMQFGIPITY
CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCCEEEEEEHHHCCCEEE
VGLGEKMEDLRPFDGRDFAQALLGSD
EECCCHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA