Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355601

Identifier: 78355601

GI number: 78355601

Start: 574357

End: 575499

Strand: Direct

Name: 78355601

Synonym: Dde_0554

Alternate gene names: NA

Gene position: 574357-575499 (Clockwise)

Preceding gene: 78355598

Following gene: 78355603

Centisome position: 15.4

GC content: 61.5

Gene sequence:

>1143_bases
ATGTCTGCGTCATTTACGGCGGCCTTTGTACTGCGGATACAGGAGGCTCTGATGGGATTTGTACTGCCTGAGTACCGGCA
TCCGGATTTTAACGGCGCTCCGCTGGCCGGTGCGCCGGCGGCCGTATTCTGTGCCTGCCCGGCAGACGGGGTGGCCCCCG
CGGGATTTCATGCCACGTCTGTTTTTCCTGAATATGTGCGCATGCAGGACGGGCACTGGGAGCTGCTGCGCCGTTCGCGT
ATGGACTGTGTCATCAGGCTGGGAACTGACGGCAGGCCCGAAGTGACGGAATTCCGCAGGTTGCGCAAAGGCGACATGGT
GGCCGTGGGCCGCGGTGAAAACGGTGAACAGGGCATCTATCTGCATACGGGCGGATTCGAGCCCGCCCGTCAGTGCGGCG
GCGAAGCGTTCGCTTTCAGAACGGGCACCAGCAGAGAGACTTCGTTTTCCATCGCATACGATACGCTGTACGACATCATG
CGTCACGACCGCAGCCACGGACGCATTATCTGGGTTGCGGGGCCTGCGGTGGTGTTTGATTCGGACGCGCGGGCGGCATT
CTGCCGTCTGATAGACAAAGGTTATGTGCACGGCCTGCTGGCGGGTAACGCCTTAGCCACCCACGACCTGGAAGGTGCGC
TGTACAATACGGCGCTGGGGCAGGGGATATATGATAAGCGCCAGATGCCGCTGGGGCACTATCACCATCTGGACACGCTG
AATACGCTGCGGGAAGCCGGCGGCATAGAACGCGCCGTGCAGCAGGGGCAGATACGGGGCGGTGTGATGCACGCTCTAAC
CCGTCAGGGCATTCCTTACGTGCTTGCCGGTTCCATACGCGACGACGGCCCGCTGCCGGAAGTGGAGCCGGACGTGTACA
GTGCGCAGGATGCCATGCGGAATCTGGCGGGAGAGGCCACAACGGTGGTGGCGCTGGCCACCCAGCTGCATACGATAGCA
ACGGGAAACATGACGCCGTCCTATCAGGTGGCGCAGGACGGCGGCGTGCGGCCGGTATATTTTTTTATCGTGGACATGTC
GGAGTTTGCGGCGGGCAAGCTGGCAGACAGAGGGTCGCTGACCGCACACGCCATACTGACCAACGTGCAGGATTTCATGG
TGAATCTGGACAGGGCCCTGTAA

Upstream 100 bases:

>100_bases
GGCCGCAGCAGAGCAAAGCGGCTTCTGCCTTGTGGCAGAGCGGCGGCAATGATATACCGGTATAAGGTGTGTTGCCGTTC
CGGCGCAGTGGTGCGCATAC

Downstream 100 bases:

>100_bases
AGACGGGCGGCGCGGCAGCCGCGCAGAGAAACGAGGGGGGTTGTTACTGCTGCATCAGCATGCGGCGGCCCCAGTCTGCC
TGTCCCAGCGAAATGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MSASFTAAFVLRIQEALMGFVLPEYRHPDFNGAPLAGAPAAVFCACPADGVAPAGFHATSVFPEYVRMQDGHWELLRRSR
MDCVIRLGTDGRPEVTEFRRLRKGDMVAVGRGENGEQGIYLHTGGFEPARQCGGEAFAFRTGTSRETSFSIAYDTLYDIM
RHDRSHGRIIWVAGPAVVFDSDARAAFCRLIDKGYVHGLLAGNALATHDLEGALYNTALGQGIYDKRQMPLGHYHHLDTL
NTLREAGGIERAVQQGQIRGGVMHALTRQGIPYVLAGSIRDDGPLPEVEPDVYSAQDAMRNLAGEATTVVALATQLHTIA
TGNMTPSYQVAQDGGVRPVYFFIVDMSEFAAGKLADRGSLTAHAILTNVQDFMVNLDRAL

Sequences:

>Translated_380_residues
MSASFTAAFVLRIQEALMGFVLPEYRHPDFNGAPLAGAPAAVFCACPADGVAPAGFHATSVFPEYVRMQDGHWELLRRSR
MDCVIRLGTDGRPEVTEFRRLRKGDMVAVGRGENGEQGIYLHTGGFEPARQCGGEAFAFRTGTSRETSFSIAYDTLYDIM
RHDRSHGRIIWVAGPAVVFDSDARAAFCRLIDKGYVHGLLAGNALATHDLEGALYNTALGQGIYDKRQMPLGHYHHLDTL
NTLREAGGIERAVQQGQIRGGVMHALTRQGIPYVLAGSIRDDGPLPEVEPDVYSAQDAMRNLAGEATTVVALATQLHTIA
TGNMTPSYQVAQDGGVRPVYFFIVDMSEFAAGKLADRGSLTAHAILTNVQDFMVNLDRAL
>Mature_379_residues
SASFTAAFVLRIQEALMGFVLPEYRHPDFNGAPLAGAPAAVFCACPADGVAPAGFHATSVFPEYVRMQDGHWELLRRSRM
DCVIRLGTDGRPEVTEFRRLRKGDMVAVGRGENGEQGIYLHTGGFEPARQCGGEAFAFRTGTSRETSFSIAYDTLYDIMR
HDRSHGRIIWVAGPAVVFDSDARAAFCRLIDKGYVHGLLAGNALATHDLEGALYNTALGQGIYDKRQMPLGHYHHLDTLN
TLREAGGIERAVQQGQIRGGVMHALTRQGIPYVLAGSIRDDGPLPEVEPDVYSAQDAMRNLAGEATTVVALATQLHTIAT
GNMTPSYQVAQDGGVRPVYFFIVDMSEFAAGKLADRGSLTAHAILTNVQDFMVNLDRAL

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 41287; Mature: 41156

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASFTAAFVLRIQEALMGFVLPEYRHPDFNGAPLAGAPAAVFCACPADGVAPAGFHATS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
VFPEYVRMQDGHWELLRRSRMDCVIRLGTDGRPEVTEFRRLRKGDMVAVGRGENGEQGIY
HCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEE
LHTGGFEPARQCGGEAFAFRTGTSRETSFSIAYDTLYDIMRHDRSHGRIIWVAGPAVVFD
EEECCCCHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCEEEEC
SDARAAFCRLIDKGYVHGLLAGNALATHDLEGALYNTALGQGIYDKRQMPLGHYHHLDTL
CCHHHHHHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHCCCCCHHHCCCCCHHHHHHHH
NTLREAGGIERAVQQGQIRGGVMHALTRQGIPYVLAGSIRDDGPLPEVEPDVYSAQDAMR
HHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
NLAGEATTVVALATQLHTIATGNMTPSYQVAQDGGVRPVYFFIVDMSEFAAGKLADRGSL
HHCCCHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCEEEEEEEEHHHHHCCCCCCCCCC
TAHAILTNVQDFMVNLDRAL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASFTAAFVLRIQEALMGFVLPEYRHPDFNGAPLAGAPAAVFCACPADGVAPAGFHATS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
VFPEYVRMQDGHWELLRRSRMDCVIRLGTDGRPEVTEFRRLRKGDMVAVGRGENGEQGIY
HCHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEE
LHTGGFEPARQCGGEAFAFRTGTSRETSFSIAYDTLYDIMRHDRSHGRIIWVAGPAVVFD
EEECCCCHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCEEEEC
SDARAAFCRLIDKGYVHGLLAGNALATHDLEGALYNTALGQGIYDKRQMPLGHYHHLDTL
CCHHHHHHHHHHHHHHHEEECCCEEEECCCCCHHHHHHHCCCCCHHHCCCCCHHHHHHHH
NTLREAGGIERAVQQGQIRGGVMHALTRQGIPYVLAGSIRDDGPLPEVEPDVYSAQDAMR
HHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
NLAGEATTVVALATQLHTIATGNMTPSYQVAQDGGVRPVYFFIVDMSEFAAGKLADRGSL
HHCCCHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCEEEEEEEEHHHHHCCCCCCCCCC
TAHAILTNVQDFMVNLDRAL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]