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The map label for this gene is ybdL [C]

Identifier: 78355560

GI number: 78355560

Start: 521478

End: 522656

Strand: Direct

Name: ybdL [C]

Synonym: Dde_0513

Alternate gene names: 78355560

Gene position: 521478-522656 (Clockwise)

Preceding gene: 78355558

Following gene: 78355561

Centisome position: 13.98

GC content: 61.66

Gene sequence:

>1179_bases
ATGACACAGACCCGCAGAGTTGCACGCCGTGTGCAGCAGATCAGGATTTCCGCCACCAAACTTATGCCCATGCTTGCCGC
CCGTATCGGCGGGTGTGTTTCTCTGGGACAGGGGGTGCCCTCGTTTTCCACGCCCCCGCATATCGTGGATGCCGTCTGCA
GGGTGCTGCGTGATGATCCGTCGGCGGGCAAGTATTCCTTGCAGCCGGGTATGCCCGCATTGCGTCAGGCCATTGCGGAG
CATCTGACTGCCGCAAAGGGCTTTGCCGCGGACCCTGACAGTGAGGTGGCCGTCACCGTGGGTGCCATGGAAGCTCTGCT
TATGGCGCTGCTGACTGTTGTGGACAGGGGTGATGAGGTCATCATTCCTTCTCCGGGCTATGCCTCGCATGCCGAACAGG
TGCTCATGGCCGAAGGCGTGCCCGTGCATGTGCCGCTGCGCCCCGCGGACTGGGGGCTGGATGTGGAGGCCGTACGAGCT
GCGGTGACGGAGCGCACCCGCGCGGTGATTGTCTGCAATCCGGGCAACCCCACGGGAACGGTCTACGCGGACGAGGATGT
GCGTGCGTTGTGCCGTCTGGCGCTCGAACACAATCTGGTGCTTATTTCCGACGAAACTTACGACTATATGGTGTTCGGAG
GACATGCGGCGCCGCTCAGTCCGGCAAGTCTTCCTGAAATGCGTGAAAATGTCATTGTCATCAATTCGTTTTCCAAAAAG
TATGCCCTTACGGGATGGCGTGTGGGGTACGCGGCTGCTTCAGCCGGATGGATGGGTGAAATGCTCAAGGTGCACGATGC
CACGGCCATCTGTGCTCCCACTGTTTCGCAGCATGCGGCGCTGGCAGCCCTGACCGGTCCGCAGGACTGTGTGGAACAGA
TGTGCGCCGCGCTGGAAAAACGCCGCAGTCTGACCATGGACCGCATGGCGGCTCTTGCTCCCGCTTTTACCTGCGTGCCG
CCGCGGGGCGCTTTTTATGTGATGGCCCGTTACTCCTGTACTCCGGAGCCTTCGCCGGAAGTGGCCCGGCGCATTCTTGA
AGAGGCGAGGGTCATCACCGTTCCGGGTGCCTCTTTCGGACCGGCGGGAGAAAATCATCTGCGGTTGTCCTTCGGGGCGG
ACGAGGCGGAGCTGACGGAATGTTTTGACCGGCTGCAACGCTGGGCGGAGCGGCAGTGA

Upstream 100 bases:

>100_bases
TTGCGGGGCGGGACACCTGCGGCTATAGTGCCGCCGGAACGGGCAATGCCGCACCGCGCCGGATTGCTGCCGGACCATAT
CAATAAGGAGCCTGCCAGAC

Downstream 100 bases:

>100_bases
ACAGGCATGCCGTCGGATTGCTGTCGCGGGGGTGCGCATGAGCCGCTCTGATGTTTTTGCCGATGCCCCGCCGGCTGACT
GGGCACAGGCTGTGCCGTTG

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTQTRRVARRVQQIRISATKLMPMLAARIGGCVSLGQGVPSFSTPPHIVDAVCRVLRDDPSAGKYSLQPGMPALRQAIAE
HLTAAKGFAADPDSEVAVTVGAMEALLMALLTVVDRGDEVIIPSPGYASHAEQVLMAEGVPVHVPLRPADWGLDVEAVRA
AVTERTRAVIVCNPGNPTGTVYADEDVRALCRLALEHNLVLISDETYDYMVFGGHAAPLSPASLPEMRENVIVINSFSKK
YALTGWRVGYAAASAGWMGEMLKVHDATAICAPTVSQHAALAALTGPQDCVEQMCAALEKRRSLTMDRMAALAPAFTCVP
PRGAFYVMARYSCTPEPSPEVARRILEEARVITVPGASFGPAGENHLRLSFGADEAELTECFDRLQRWAERQ

Sequences:

>Translated_392_residues
MTQTRRVARRVQQIRISATKLMPMLAARIGGCVSLGQGVPSFSTPPHIVDAVCRVLRDDPSAGKYSLQPGMPALRQAIAE
HLTAAKGFAADPDSEVAVTVGAMEALLMALLTVVDRGDEVIIPSPGYASHAEQVLMAEGVPVHVPLRPADWGLDVEAVRA
AVTERTRAVIVCNPGNPTGTVYADEDVRALCRLALEHNLVLISDETYDYMVFGGHAAPLSPASLPEMRENVIVINSFSKK
YALTGWRVGYAAASAGWMGEMLKVHDATAICAPTVSQHAALAALTGPQDCVEQMCAALEKRRSLTMDRMAALAPAFTCVP
PRGAFYVMARYSCTPEPSPEVARRILEEARVITVPGASFGPAGENHLRLSFGADEAELTECFDRLQRWAERQ
>Mature_391_residues
TQTRRVARRVQQIRISATKLMPMLAARIGGCVSLGQGVPSFSTPPHIVDAVCRVLRDDPSAGKYSLQPGMPALRQAIAEH
LTAAKGFAADPDSEVAVTVGAMEALLMALLTVVDRGDEVIIPSPGYASHAEQVLMAEGVPVHVPLRPADWGLDVEAVRAA
VTERTRAVIVCNPGNPTGTVYADEDVRALCRLALEHNLVLISDETYDYMVFGGHAAPLSPASLPEMRENVIVINSFSKKY
ALTGWRVGYAAASAGWMGEMLKVHDATAICAPTVSQHAALAALTGPQDCVEQMCAALEKRRSLTMDRMAALAPAFTCVPP
RGAFYVMARYSCTPEPSPEVARRILEEARVITVPGASFGPAGENHLRLSFGADEAELTECFDRLQRWAERQ

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=421, Percent_Identity=27.0783847980998, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI169881279, Length=421, Percent_Identity=27.0783847980998, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI56713256, Length=347, Percent_Identity=28.8184438040346, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI56713254, Length=347, Percent_Identity=28.8184438040346, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI169881281, Length=304, Percent_Identity=25.3289473684211, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI4885351, Length=354, Percent_Identity=28.8135593220339, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI19263340, Length=357, Percent_Identity=27.7310924369748, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI215599424, Length=356, Percent_Identity=27.8089887640449, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI4507369, Length=400, Percent_Identity=22, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1786816, Length=360, Percent_Identity=30, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1788722, Length=392, Percent_Identity=29.0816326530612, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1788627, Length=354, Percent_Identity=28.2485875706215, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787710, Length=192, Percent_Identity=32.8125, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1790797, Length=314, Percent_Identity=26.7515923566879, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=367, Percent_Identity=27.7929155313352, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71994476, Length=368, Percent_Identity=28.2608695652174, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17567369, Length=386, Percent_Identity=25.6476683937824, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17567663, Length=369, Percent_Identity=25.2032520325203, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71981209, Length=352, Percent_Identity=24.4318181818182, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322401, Length=390, Percent_Identity=26.6666666666667, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320317, Length=369, Percent_Identity=26.2872628726287, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323118, Length=387, Percent_Identity=25.0645994832041, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28573069, Length=391, Percent_Identity=26.0869565217391, Blast_Score=144, Evalue=7e-35,
Organism=Drosophila melanogaster, GI24646114, Length=391, Percent_Identity=26.0869565217391, Blast_Score=144, Evalue=7e-35,
Organism=Drosophila melanogaster, GI28573067, Length=391, Percent_Identity=26.0869565217391, Blast_Score=144, Evalue=7e-35,
Organism=Drosophila melanogaster, GI28573065, Length=391, Percent_Identity=26.0869565217391, Blast_Score=144, Evalue=7e-35,
Organism=Drosophila melanogaster, GI18859735, Length=410, Percent_Identity=23.9024390243902, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24641770, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641760, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641768, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641766, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641764, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45551451, Length=412, Percent_Identity=22.3300970873786, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42158; Mature: 42027

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTRRVARRVQQIRISATKLMPMLAARIGGCVSLGQGVPSFSTPPHIVDAVCRVLRDDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
SAGKYSLQPGMPALRQAIAEHLTAAKGFAADPDSEVAVTVGAMEALLMALLTVVDRGDEV
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEE
IIPSPGYASHAEQVLMAEGVPVHVPLRPADWGLDVEAVRAAVTERTRAVIVCNPGNPTGT
EECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCE
VYADEDVRALCRLALEHNLVLISDETYDYMVFGGHAAPLSPASLPEMRENVIVINSFSKK
EEECHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHCCEEEEECCCCC
YALTGWRVGYAAASAGWMGEMLKVHDATAICAPTVSQHAALAALTGPQDCVEQMCAALEK
CCCCCCCHHHHHHCCCHHHHHHHHHCCHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHH
RRSLTMDRMAALAPAFTCVPPRGAFYVMARYSCTPEPSPEVARRILEEARVITVPGASFG
HHCCCHHHHHHHCCHHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCC
PAGENHLRLSFGADEAELTECFDRLQRWAERQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTRRVARRVQQIRISATKLMPMLAARIGGCVSLGQGVPSFSTPPHIVDAVCRVLRDDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
SAGKYSLQPGMPALRQAIAEHLTAAKGFAADPDSEVAVTVGAMEALLMALLTVVDRGDEV
CCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEE
IIPSPGYASHAEQVLMAEGVPVHVPLRPADWGLDVEAVRAAVTERTRAVIVCNPGNPTGT
EECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCE
VYADEDVRALCRLALEHNLVLISDETYDYMVFGGHAAPLSPASLPEMRENVIVINSFSKK
EEECHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHCCEEEEECCCCC
YALTGWRVGYAAASAGWMGEMLKVHDATAICAPTVSQHAALAALTGPQDCVEQMCAALEK
CCCCCCCHHHHHHCCCHHHHHHHHHCCHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHH
RRSLTMDRMAALAPAFTCVPPRGAFYVMARYSCTPEPSPEVARRILEEARVITVPGASFG
HHCCCHHHHHHHCCHHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCC
PAGENHLRLSFGADEAELTECFDRLQRWAERQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]