| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ilvE [H]
Identifier: 78355112
GI number: 78355112
Start: 55979
End: 56902
Strand: Direct
Name: ilvE [H]
Synonym: Dde_0065
Alternate gene names: 78355112
Gene position: 55979-56902 (Clockwise)
Preceding gene: 161485612
Following gene: 78355113
Centisome position: 1.5
GC content: 56.93
Gene sequence:
>924_bases ATGGTCCAGAAATCGGAAACGATCTGGTTTGACGGCAAGCAGGTTGCATGGGACGATGCCAATGTGCACGTTTTGACCCA CACCCTGCATTACGGTCTGGGCGTGTTCGAGGGAATCCGCGCCTATAAGTGTGTTGACGGCACTTCCGCCGTGTTCCGCC TGCGCGAACATGTCGAACGCCTGTTTGCTTCGGCCCGCATTCTGCGCATGGAAATTCCCTATACCGTCGACCAGCTTGTG GATGCCGTGGTGGAAACGCTGCAGCGCAACAAACTGGACGAAGGCTATATCCGCCCCTTGAGCTTTGTGGGCGCGGGTGC CATGGGTGTGAACCCCGGCAGCAACCCCATACAGACCATCATTGCCACGTGGCCCTGGGGCGCGTATCTGGGTGAAGAGG CGCTGGAAGCGGGCATCCGCGTAAAAACCAGTTCCTTCCAGCGTCATCATGTAAACGCCATGATGACCAAGGCAAAGGCC GTGGGCAACTATGTAAACTCCATTCTGGCCAAAACAGAAGCTCTTGCAGACGGTTACGACGAAGGGCTGATGCTGGATAC CGCGGGATTTGTTTCTGAAGCCACCGGCGAAAACATTTTCATCGTGCGCGGCGGCGTCATTAAAACAACGCCCCTTACGT CCATACTGGACGGTATCACCCGCAACAGCCTGATGACGCTGGCCGGTGATCTGGGCTACACCGTGGTGGAACAGCAGTTC ACCCGCGATGAGCTGTATGTGGCCGATGAAGCCTTTTTCTGCGGCACTGCGGCGGAGGTCACTCCCATACGTGAAGTGGA CCGCCGCGTTATCGGCGCCGGCAAGGCCGGACCGGTCACCAAGCATCTGCAGACCGAGTACTTCAAGCTTGTAAAGGGTG AAAATCCCAAGTACGCACACTGGCTGCATCAGTATTCACTGTAG
Upstream 100 bases:
>100_bases TTAGCGTGCGTTGTTGGCTTGAGTGCAATCATTCTCGTCGCTCCGCATGGGAGTCCGACGCAACCCGCGTCTGCGCAAGG GCGCGTAAAGGGGTTTACTA
Downstream 100 bases:
>100_bases CGGCATACGCCTTTCCGGCCGGCCCTGCCTCGGCAGGGCCGGTTTTTCACCCTTTTAGCCCCCCCACTTATGAGTCACGC ATCGCTAACCGCAAAATACA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MVQKSETIWFDGKQVAWDDANVHVLTHTLHYGLGVFEGIRAYKCVDGTSAVFRLREHVERLFASARILRMEIPYTVDQLV DAVVETLQRNKLDEGYIRPLSFVGAGAMGVNPGSNPIQTIIATWPWGAYLGEEALEAGIRVKTSSFQRHHVNAMMTKAKA VGNYVNSILAKTEALADGYDEGLMLDTAGFVSEATGENIFIVRGGVIKTTPLTSILDGITRNSLMTLAGDLGYTVVEQQF TRDELYVADEAFFCGTAAEVTPIREVDRRVIGAGKAGPVTKHLQTEYFKLVKGENPKYAHWLHQYSL
Sequences:
>Translated_307_residues MVQKSETIWFDGKQVAWDDANVHVLTHTLHYGLGVFEGIRAYKCVDGTSAVFRLREHVERLFASARILRMEIPYTVDQLV DAVVETLQRNKLDEGYIRPLSFVGAGAMGVNPGSNPIQTIIATWPWGAYLGEEALEAGIRVKTSSFQRHHVNAMMTKAKA VGNYVNSILAKTEALADGYDEGLMLDTAGFVSEATGENIFIVRGGVIKTTPLTSILDGITRNSLMTLAGDLGYTVVEQQF TRDELYVADEAFFCGTAAEVTPIREVDRRVIGAGKAGPVTKHLQTEYFKLVKGENPKYAHWLHQYSL >Mature_307_residues MVQKSETIWFDGKQVAWDDANVHVLTHTLHYGLGVFEGIRAYKCVDGTSAVFRLREHVERLFASARILRMEIPYTVDQLV DAVVETLQRNKLDEGYIRPLSFVGAGAMGVNPGSNPIQTIIATWPWGAYLGEEALEAGIRVKTSSFQRHHVNAMMTKAKA VGNYVNSILAKTEALADGYDEGLMLDTAGFVSEATGENIFIVRGGVIKTTPLTSILDGITRNSLMTLAGDLGYTVVEQQF TRDELYVADEAFFCGTAAEVTPIREVDRRVIGAGKAGPVTKHLQTEYFKLVKGENPKYAHWLHQYSL
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=286, Percent_Identity=26.5734265734266, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI48994963, Length=304, Percent_Identity=49.3421052631579, Blast_Score=295, Evalue=3e-81, Organism=Caenorhabditis elegans, GI17565728, Length=284, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322608, Length=288, Percent_Identity=26.7361111111111, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322002, Length=264, Percent_Identity=26.8939393939394, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33931; Mature: 33931
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQKSETIWFDGKQVAWDDANVHVLTHTLHYGLGVFEGIRAYKCVDGTSAVFRLREHVER CCCCCCEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH LFASARILRMEIPYTVDQLVDAVVETLQRNKLDEGYIRPLSFVGAGAMGVNPGSNPIQTI HHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHH IATWPWGAYLGEEALEAGIRVKTSSFQRHHVNAMMTKAKAVGNYVNSILAKTEALADGYD EEECCCHHHHCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EGLMLDTAGFVSEATGENIFIVRGGVIKTTPLTSILDGITRNSLMTLAGDLGYTVVEQQF CCEEEECCHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TRDELYVADEAFFCGTAAEVTPIREVDRRVIGAGKAGPVTKHLQTEYFKLVKGENPKYAH CCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH WLHQYSL HHHHCCC >Mature Secondary Structure MVQKSETIWFDGKQVAWDDANVHVLTHTLHYGLGVFEGIRAYKCVDGTSAVFRLREHVER CCCCCCEEEECCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHH LFASARILRMEIPYTVDQLVDAVVETLQRNKLDEGYIRPLSFVGAGAMGVNPGSNPIQTI HHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHH IATWPWGAYLGEEALEAGIRVKTSSFQRHHVNAMMTKAKAVGNYVNSILAKTEALADGYD EEECCCHHHHCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EGLMLDTAGFVSEATGENIFIVRGGVIKTTPLTSILDGITRNSLMTLAGDLGYTVVEQQF CCEEEECCHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TRDELYVADEAFFCGTAAEVTPIREVDRRVIGAGKAGPVTKHLQTEYFKLVKGENPKYAH CCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH WLHQYSL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]