| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is engA
Identifier: 161485612
GI number: 161485612
Start: 51957
End: 53324
Strand: Direct
Name: engA
Synonym: Dde_0062
Alternate gene names: 161485612
Gene position: 51957-53324 (Clockwise)
Preceding gene: 78355108
Following gene: 78355112
Centisome position: 1.39
GC content: 58.55
Gene sequence:
>1368_bases ATGTTACCCAAGATAGCTCTCATCGGTCGCCCCAACGTGGGCAAATCCACCCTTTTCAACAGGCTGATCCGCAGCAACAG AGCCATAACCCATGACCGTCCCGGAGTAACCCGTGACCGCATGGAAGGCTATGTGAAAGTGGGAGACCGGAAGTTCATCA TTATTGACACCGGCGGCATAACGCTGGACGAACACGCTGCCGTGGCGGAAGGGCCGGACGAACTGCGCGGGTTCGAGGCG GAGATTCTGCGCCAGACGGAAGAGGCCATTGCCGATTCCGTGGCCTTGTGCCTGGTTGTGGACGGACGCGAGGGGCTGAC TCCCTTTGACGAAAGTCTGGCCGCGTATGTGCGCAAATCGGGCAAGCCCGTGCTGCTGGCCGTCAACAAGGTGGACGGCG AAGAAATGGCCGACCTGTACATGGCCGAATTCCATACGCTGGGCTTTCCGGTCATCCCGCTTTCCGGCGCTCACGGATTC AATGTGCGGGCATTCAGCGGCGAGTTGTTTGACCTGCTGCCTCCCGAAGACGAAGACGCCCCGCAGGAAGAAGAGGAACG CCCCCTCAAACTGGCCATGCTGGGCCGCCCCAATGCGGGCAAGTCTTCGCTGGTCAACGCCCTGAGCGGCAGCCGCCGCA TGATTGTTTCCGATGTGGCGGGCACCACCCGCGACAGTGTGGATATTGCCGTGGAACTGGGCGGCAGGCGCTATGTTTTT GTGGATACGGCCGGAGTGCGCCGTCGGGCAAAGATTCAGGACCCTGTGGAACGGTACAGCGTCAACTCTTCGCTCAAGTC GACAACCAAGGCCGATGTGACGCTGGTGGTGCTGGATGCGGTGGAAGGTCTGACACAGCAGGACAAGCGGCTCATTGATC TGCTGGACGAGCGCAAGACGCCGTTCATGCTGGTGATCAACAAAATTGACCTTGTGCCCCGGGATGGCCTGACCGCGCTG AAGCGTCTGTACGATGATGCCCTGACATTCTGCAAGCATGTGCCCATCATGTACATTTCTGCGCGCAGCGGCCGCGGAGT GGACAAGCTGCTGCCCATGGCCCGTAAAATTAACAAGGAATGTTATGTGCGCGTGGGTACGGGGCTGCTGAACCGGACAC TTACGGAAGCAGTCACCCGCCACCAGCCGCCGGTGGTCAAACGGGTGCGTCCCAAATTCTTTTATCTGACGCAGGCGGAA ACCAACCCGCCGACGTTTGTGTTTTTTGTCAACGACCATGAGCGTATTCAGGAGTCGTATGCGCGGTATCTGGAAAAATT CATGCGGAAACGGTTTGAAATCGAGCATGCCCCCATGCGGGTGCGTTTCCGGTCGAGCCACACCAAAAACCGTGACAGAA AAAAATAG
Upstream 100 bases:
>100_bases GCCTTTGCAGGGGATTCCCGCCGCGGTCGCCCGCAATCACATGGCAGGCCTGCCGGTCTGCTGCATACGCGCAAGGCTCT GCCTCGCACCGGAAAATATC
Downstream 100 bases:
>100_bases GCACTCTGCCCTGCCCGTATACTGAACGGCGCCGGATTCCTGTGGAATCCGGCGCCGTTTTTGTCTGTCCGGTACATGAT GCCGCCGTGCTGACGGCATG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGITLDEHAAVAEGPDELRGFEA EILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVRKSGKPVLLAVNKVDGEEMADLYMAEFHTLGFPVIPLSGAHGF NVRAFSGELFDLLPPEDEDAPQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVF VDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTAL KRLYDDALTFCKHVPIMYISARSGRGVDKLLPMARKINKECYVRVGTGLLNRTLTEAVTRHQPPVVKRVRPKFFYLTQAE TNPPTFVFFVNDHERIQESYARYLEKFMRKRFEIEHAPMRVRFRSSHTKNRDRKK
Sequences:
>Translated_455_residues MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGITLDEHAAVAEGPDELRGFEA EILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVRKSGKPVLLAVNKVDGEEMADLYMAEFHTLGFPVIPLSGAHGF NVRAFSGELFDLLPPEDEDAPQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVF VDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTAL KRLYDDALTFCKHVPIMYISARSGRGVDKLLPMARKINKECYVRVGTGLLNRTLTEAVTRHQPPVVKRVRPKFFYLTQAE TNPPTFVFFVNDHERIQESYARYLEKFMRKRFEIEHAPMRVRFRSSHTKNRDRKK >Mature_455_residues MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGITLDEHAAVAEGPDELRGFEA EILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVRKSGKPVLLAVNKVDGEEMADLYMAEFHTLGFPVIPLSGAHGF NVRAFSGELFDLLPPEDEDAPQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVF VDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTAL KRLYDDALTFCKHVPIMYISARSGRGVDKLLPMARKINKECYVRVGTGLLNRTLTEAVTRHQPPVVKRVRPKFFYLTQAE TNPPTFVFFVNDHERIQESYARYLEKFMRKRFEIEHAPMRVRFRSSHTKNRDRKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=472, Percent_Identity=37.7118644067797, Blast_Score=304, Evalue=1e-83, Organism=Escherichia coli, GI1788919, Length=185, Percent_Identity=31.8918918918919, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI2367268, Length=168, Percent_Identity=33.9285714285714, Blast_Score=76, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17507259, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323665, Length=169, Percent_Identity=31.3609467455621, Blast_Score=91, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 51205; Mature: 51205
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGI CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCEEEEEEECCCE TLDEHAAVAEGPDELRGFEAEILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVRKS EECCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCC GKPVLLAVNKVDGEEMADLYMAEFHTLGFPVIPLSGAHGFNVRAFSGELFDLLPPEDEDA CCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCC PQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVF CCCHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCEEEEE VDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDERKT EECCCCCCHHHCCCHHHHHHCCCHHHCCCCCCEEEEEEEHHHCHHHHHHHHHHHHHCCCC PFMLVINKIDLVPRDGLTALKRLYDDALTFCKHVPIMYISARSGRGVDKLLPMARKINKE CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC CYVRVGTGLLNRTLTEAVTRHQPPVVKRVRPKFFYLTQAETNPPTFVFFVNDHERIQESY EEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHHHHH ARYLEKFMRKRFEIEHAPMRVRFRSSHTKNRDRKK HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGI CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCEEEEEEECCCE TLDEHAAVAEGPDELRGFEAEILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVRKS EECCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCC GKPVLLAVNKVDGEEMADLYMAEFHTLGFPVIPLSGAHGFNVRAFSGELFDLLPPEDEDA CCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCC PQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVF CCCHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCEEEEE VDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDERKT EECCCCCCHHHCCCHHHHHHCCCHHHCCCCCCEEEEEEEHHHCHHHHHHHHHHHHHCCCC PFMLVINKIDLVPRDGLTALKRLYDDALTFCKHVPIMYISARSGRGVDKLLPMARKINKE CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC CYVRVGTGLLNRTLTEAVTRHQPPVVKRVRPKFFYLTQAETNPPTFVFFVNDHERIQESY EEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCEEEEEECCHHHHHHHH ARYLEKFMRKRFEIEHAPMRVRFRSSHTKNRDRKK HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA