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The map label for this gene is tsr [C]

Identifier: 78224279

GI number: 78224279

Start: 3486132

End: 3488555

Strand: Reverse

Name: tsr [C]

Synonym: Gmet_3087

Alternate gene names: 78224279

Gene position: 3488555-3486132 (Counterclockwise)

Preceding gene: 78224280

Following gene: 78224278

Centisome position: 87.27

GC content: 60.6

Gene sequence:

>2424_bases
ATGACCATCAAGACAAAACTCACGGCGAACGCCTGTATCATGATCATCGTTGTTGGTGCCGTCGCCGTCACCAGCTTCAT
CGGCATGCGGTCCATCAAGGGGCGACTCTCGTATCTCACGGAAAAGAGCACCCCCTTCCAGATGCGCACCGTCGAGTTCC
AGCGGTCGCTTCAGGGGGCCACCGCCGATCTGATCAAGGTGGTGGCGTCGGCAACCACCCAGGAGTTCGCAGCGGCGAAG
GCGGAGGCCGAACAGTCGCTGAGGGATGTCAGGGCGGCGCAGGAGGTGCTGGAAAACCTCTCCGGGGAGAAACTCCAGGC
GTCTGATGAGTTGAACGGCATTGCCGCCGAGCTGTTCAGCACCATGACCGCGAAACTTACGTCCGAAAGGGAATCGGCGG
AGGCAAGCGCCATGATTTCCCGGCAGGCCAGGGAGACAACCGCGCGGCTCAAGGAGTTGGACCGCAAAGTCAAGAACCTC
CAGCAGAGCAGTTCCGCCGCCTATGCCTCGGCCACTGACGAAACCGACAAGATTGCCCAGCGGTTGAGGAGCATTGAAAC
CCTCAAGGCATCCCTGAAAGAGGTCCAGTACCTGGTCGTCGACCTGCAGCGGGTGCAGAACAAGAAGCAGATTCAGGAAA
AGTACGCCGTTGCCATGAAGAAGGTTATGCAGAACAGTAACGTCCGGCAGAACAAGCAGATCGGCAGCGAAGTCGCTGCC
ATCAATGCCAGGATGGAAGAACTCATCAAGGCCCAGGTGGAGGGGAGCGATCAAAGGCGGGTCGATGCCCTTGCCGGCCA
CGTGGGCGAGGCGTTGGCAACGATTTCCGAAACGATCGAGGATGAGGCGGACAAGGCGAACCAGATGAGCACGGCTGTTG
CCGCCAAGCTGAAGGGCAATTTCTCGAATTCGAATATCGCCGTTGGTGTTCTGTCGAGCAACTCCGATCTGGTCTCCCTC
GGTGTCTCCGTGGAAGGGCTCTCCTCCCGCCTGTTCCTCGCCGGGTCGGAAAAGGAACTGGACGGTATCGCCGCCGAGAT
CAACCAGCAGTACGGGAGGATAGCCGCGGCAGAGAGAGCGGTGGAAGTCTCGCTGCGGAAGGTCAAGGCCAACCAGGAGC
TGAAGCTCCTCAATGCAGCCTTCGGCTCGCTCTCCAGCATCCGGGAGACCATTCTGGCCAAGGACGGGATCCTTGCAAAA
CTCCACCAGAAGATGCAACTCAAGGCCCGGGCGGAGCACGATGCGGCAAAGCTTCGGGAAATCGTGCGGAAGCAGGCAGC
GAAAGGAAAAGAGACCGTAACAACTGCCCAGGGTGATCAGGAAAAGGCCATTGCATCGGTCAATACGACGATCCGTTTCA
GCATGGGCCTCATTGTCGGCATCAGCATCGGTGCCATCGTGTTCGGCATTCTGATTGGCTTCTGGATCTATCGCTCCATT
GCCCTGCCGATGGGACAGCTCATCGCCGCTTCCGAGGAGGTGGCCGGAGGAAACCTTGCCGCGCGCCTGGAAAGCGGCAG
CCGCGACGAGGTGGGGAAGGTTCAGGCGTCAATGGCGAAGATGGTGGACAGTATCCGCCAGATAGTGGCCAGAATCGGCG
CTGCCACGGAGTCTCTGGCCAGTAATTCCGAAGAGATGTCAACCACTGCCGCTGTCCTTGAGGAGGGAGCGGAACAGCAG
GCTCTACGCGTGGAGCAGTCGGCGGCTGCCATGGTGGAAATGTCCCAGACGACCCTCGATGTGGCCAGGAATACCTCCGA
GGCTGCCGGAACCGCCGAGATGATGAAAACGGCCGCGCTTGAGGGAAAGGAGGCCATGTCGCTCACCGTCCGGGAGTTGC
GCCACTTCGCCGGAACCTTTGAGGATACCGCCGGCAAGGTGGAACTCCTGGGGGACCAGTCGGCCCAGATCAACGAGATC
GTCACCCTGATCGAGGATATTGCGGACCAGACCAACCTGCTGGCCCTCAACGCCTCCATCGAGGCTGCCCGTGCCGGTGA
GCAGGGGCGGGGCTTCGCCGTGGTCGCCGACAGCGTCCGGCAACTGGCCGAGAGAACGGCAACCGCCACCGCGGACATTT
CCCAGACGGTGAAAGCCATGCAGGAGAGCGTGAAGCAGTCGGTGGGCTCCATGCATCACGAGCGGCGGTCGGTGGGCACG
ATCCTCGACCGGATTAACGATACCATGGAGGCCACGGACCGGATCGTGGAGTATGTGGAACGGGTCACCGACATGGTGCG
GCGCATCGCCGTGGCGGCGGAGCAGCAGTCGTCAACCAGCGGTGACGTTTCCCGGAACATGGATGAGATTTCCGTCATTA
CCCGTGAACTGCGCAGTTCGTTCAGTGACATCAAGCATTCCTCCGAGGATCTCTCCCGCCTGGCCGGTGAGTTGAACGGC
ATGGTGGGGTGGTTCAGGGTGTAG

Upstream 100 bases:

>100_bases
CCGATAAGCAATAACAGGGGGGGAGAAGGCGCTTGGCGTCTTCTCCCCTTGTTGGTGCAGTTTAGTTGGGCTACATGGCG
GCAAGCAGAGGACTTTTCGA

Downstream 100 bases:

>100_bases
GAGCCGTTTTTTCTCGTTGCACCTCCCGGCGCTTCAGGTATCATCCCCCCCCAAAGTCGTCACCGGGAGGTCAACCATGC
AGAAGGGAAAGCCGGCCAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 807; Mature: 806

Protein sequence:

>807_residues
MTIKTKLTANACIMIIVVGAVAVTSFIGMRSIKGRLSYLTEKSTPFQMRTVEFQRSLQGATADLIKVVASATTQEFAAAK
AEAEQSLRDVRAAQEVLENLSGEKLQASDELNGIAAELFSTMTAKLTSERESAEASAMISRQARETTARLKELDRKVKNL
QQSSSAAYASATDETDKIAQRLRSIETLKASLKEVQYLVVDLQRVQNKKQIQEKYAVAMKKVMQNSNVRQNKQIGSEVAA
INARMEELIKAQVEGSDQRRVDALAGHVGEALATISETIEDEADKANQMSTAVAAKLKGNFSNSNIAVGVLSSNSDLVSL
GVSVEGLSSRLFLAGSEKELDGIAAEINQQYGRIAAAERAVEVSLRKVKANQELKLLNAAFGSLSSIRETILAKDGILAK
LHQKMQLKARAEHDAAKLREIVRKQAAKGKETVTTAQGDQEKAIASVNTTIRFSMGLIVGISIGAIVFGILIGFWIYRSI
ALPMGQLIAASEEVAGGNLAARLESGSRDEVGKVQASMAKMVDSIRQIVARIGAATESLASNSEEMSTTAAVLEEGAEQQ
ALRVEQSAAAMVEMSQTTLDVARNTSEAAGTAEMMKTAALEGKEAMSLTVRELRHFAGTFEDTAGKVELLGDQSAQINEI
VTLIEDIADQTNLLALNASIEAARAGEQGRGFAVVADSVRQLAERTATATADISQTVKAMQESVKQSVGSMHHERRSVGT
ILDRINDTMEATDRIVEYVERVTDMVRRIAVAAEQQSSTSGDVSRNMDEISVITRELRSSFSDIKHSSEDLSRLAGELNG
MVGWFRV

Sequences:

>Translated_807_residues
MTIKTKLTANACIMIIVVGAVAVTSFIGMRSIKGRLSYLTEKSTPFQMRTVEFQRSLQGATADLIKVVASATTQEFAAAK
AEAEQSLRDVRAAQEVLENLSGEKLQASDELNGIAAELFSTMTAKLTSERESAEASAMISRQARETTARLKELDRKVKNL
QQSSSAAYASATDETDKIAQRLRSIETLKASLKEVQYLVVDLQRVQNKKQIQEKYAVAMKKVMQNSNVRQNKQIGSEVAA
INARMEELIKAQVEGSDQRRVDALAGHVGEALATISETIEDEADKANQMSTAVAAKLKGNFSNSNIAVGVLSSNSDLVSL
GVSVEGLSSRLFLAGSEKELDGIAAEINQQYGRIAAAERAVEVSLRKVKANQELKLLNAAFGSLSSIRETILAKDGILAK
LHQKMQLKARAEHDAAKLREIVRKQAAKGKETVTTAQGDQEKAIASVNTTIRFSMGLIVGISIGAIVFGILIGFWIYRSI
ALPMGQLIAASEEVAGGNLAARLESGSRDEVGKVQASMAKMVDSIRQIVARIGAATESLASNSEEMSTTAAVLEEGAEQQ
ALRVEQSAAAMVEMSQTTLDVARNTSEAAGTAEMMKTAALEGKEAMSLTVRELRHFAGTFEDTAGKVELLGDQSAQINEI
VTLIEDIADQTNLLALNASIEAARAGEQGRGFAVVADSVRQLAERTATATADISQTVKAMQESVKQSVGSMHHERRSVGT
ILDRINDTMEATDRIVEYVERVTDMVRRIAVAAEQQSSTSGDVSRNMDEISVITRELRSSFSDIKHSSEDLSRLAGELNG
MVGWFRV
>Mature_806_residues
TIKTKLTANACIMIIVVGAVAVTSFIGMRSIKGRLSYLTEKSTPFQMRTVEFQRSLQGATADLIKVVASATTQEFAAAKA
EAEQSLRDVRAAQEVLENLSGEKLQASDELNGIAAELFSTMTAKLTSERESAEASAMISRQARETTARLKELDRKVKNLQ
QSSSAAYASATDETDKIAQRLRSIETLKASLKEVQYLVVDLQRVQNKKQIQEKYAVAMKKVMQNSNVRQNKQIGSEVAAI
NARMEELIKAQVEGSDQRRVDALAGHVGEALATISETIEDEADKANQMSTAVAAKLKGNFSNSNIAVGVLSSNSDLVSLG
VSVEGLSSRLFLAGSEKELDGIAAEINQQYGRIAAAERAVEVSLRKVKANQELKLLNAAFGSLSSIRETILAKDGILAKL
HQKMQLKARAEHDAAKLREIVRKQAAKGKETVTTAQGDQEKAIASVNTTIRFSMGLIVGISIGAIVFGILIGFWIYRSIA
LPMGQLIAASEEVAGGNLAARLESGSRDEVGKVQASMAKMVDSIRQIVARIGAATESLASNSEEMSTTAAVLEEGAEQQA
LRVEQSAAAMVEMSQTTLDVARNTSEAAGTAEMMKTAALEGKEAMSLTVRELRHFAGTFEDTAGKVELLGDQSAQINEIV
TLIEDIADQTNLLALNASIEAARAGEQGRGFAVVADSVRQLAERTATATADISQTVKAMQESVKQSVGSMHHERRSVGTI
LDRINDTMEATDRIVEYVERVTDMVRRIAVAAEQQSSTSGDVSRNMDEISVITRELRSSFSDIKHSSEDLSRLAGELNGM
VGWFRV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=31.6568047337278, Blast_Score=134, Evalue=3e-32,
Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=33.2236842105263, Blast_Score=132, Evalue=7e-32,
Organism=Escherichia coli, GI1787690, Length=350, Percent_Identity=31.7142857142857, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788194, Length=364, Percent_Identity=30.7692307692308, Blast_Score=116, Evalue=6e-27,
Organism=Escherichia coli, GI1789453, Length=271, Percent_Identity=32.1033210332103, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 86944; Mature: 86813

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKTKLTANACIMIIVVGAVAVTSFIGMRSIKGRLSYLTEKSTPFQMRTVEFQRSLQGA
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH
TADLIKVVASATTQEFAAAKAEAEQSLRDVRAAQEVLENLSGEKLQASDELNGIAAELFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHH
TMTAKLTSERESAEASAMISRQARETTARLKELDRKVKNLQQSSSAAYASATDETDKIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLRSIETLKASLKEVQYLVVDLQRVQNKKQIQEKYAVAMKKVMQNSNVRQNKQIGSEVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
INARMEELIKAQVEGSDQRRVDALAGHVGEALATISETIEDEADKANQMSTAVAAKLKGN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSNSNIAVGVLSSNSDLVSLGVSVEGLSSRLFLAGSEKELDGIAAEINQQYGRIAAAERA
CCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VEVSLRKVKANQELKLLNAAFGSLSSIRETILAKDGILAKLHQKMQLKARAEHDAAKLRE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVRKQAAKGKETVTTAQGDQEKAIASVNTTIRFSMGLIVGISIGAIVFGILIGFWIYRSI
HHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPMGQLIAASEEVAGGNLAARLESGSRDEVGKVQASMAKMVDSIRQIVARIGAATESLA
HHHHHHHHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNSEEMSTTAAVLEEGAEQQALRVEQSAAAMVEMSQTTLDVARNTSEAAGTAEMMKTAAL
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EGKEAMSLTVRELRHFAGTFEDTAGKVELLGDQSAQINEIVTLIEDIADQTNLLALNASI
CCHHHHHHHHHHHHHHHCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCH
EAARAGEQGRGFAVVADSVRQLAERTATATADISQTVKAMQESVKQSVGSMHHERRSVGT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDRINDTMEATDRIVEYVERVTDMVRRIAVAAEQQSSTSGDVSRNMDEISVITRELRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHH
FSDIKHSSEDLSRLAGELNGMVGWFRV
HHHHHCCHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
TIKTKLTANACIMIIVVGAVAVTSFIGMRSIKGRLSYLTEKSTPFQMRTVEFQRSLQGA
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH
TADLIKVVASATTQEFAAAKAEAEQSLRDVRAAQEVLENLSGEKLQASDELNGIAAELFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHH
TMTAKLTSERESAEASAMISRQARETTARLKELDRKVKNLQQSSSAAYASATDETDKIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLRSIETLKASLKEVQYLVVDLQRVQNKKQIQEKYAVAMKKVMQNSNVRQNKQIGSEVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
INARMEELIKAQVEGSDQRRVDALAGHVGEALATISETIEDEADKANQMSTAVAAKLKGN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSNSNIAVGVLSSNSDLVSLGVSVEGLSSRLFLAGSEKELDGIAAEINQQYGRIAAAERA
CCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VEVSLRKVKANQELKLLNAAFGSLSSIRETILAKDGILAKLHQKMQLKARAEHDAAKLRE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVRKQAAKGKETVTTAQGDQEKAIASVNTTIRFSMGLIVGISIGAIVFGILIGFWIYRSI
HHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPMGQLIAASEEVAGGNLAARLESGSRDEVGKVQASMAKMVDSIRQIVARIGAATESLA
HHHHHHHHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNSEEMSTTAAVLEEGAEQQALRVEQSAAAMVEMSQTTLDVARNTSEAAGTAEMMKTAAL
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EGKEAMSLTVRELRHFAGTFEDTAGKVELLGDQSAQINEIVTLIEDIADQTNLLALNASI
CCHHHHHHHHHHHHHHHCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCH
EAARAGEQGRGFAVVADSVRQLAERTATATADISQTVKAMQESVKQSVGSMHHERRSVGT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDRINDTMEATDRIVEYVERVTDMVRRIAVAAEQQSSTSGDVSRNMDEISVITRELRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHH
FSDIKHSSEDLSRLAGELNGMVGWFRV
HHHHHCCHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA