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The map label for this gene is 78224280

Identifier: 78224280

GI number: 78224280

Start: 3488747

End: 3490111

Strand: Reverse

Name: 78224280

Synonym: Gmet_3088

Alternate gene names: NA

Gene position: 3490111-3488747 (Counterclockwise)

Preceding gene: 78224281

Following gene: 78224279

Centisome position: 87.31

GC content: 61.32

Gene sequence:

>1365_bases
ATGATCAAGATACTTTTCACCGGGCTCGTTGCCGGGGCGGTGATGGCATCCGCCGCCTTTGCCAAGGATCATCCCGGCAG
GGAGTATATGGAGAAGAACGGCTACAAGGGGCCGGAAACCTGCGAGGTCTGCCACCCCGGCAAGGCAAAGGAGTTCCTCT
CCACCGTCCACTGGACCCACGCCTCGAAGGTGGACAATGTGGAGAATACCGATCCGACCCGGGAATACGGCATGAAAAAC
CGCATCTACACCATGTGCAACGGCAACGATATTGTCAATAACCTCAAGGAGATCCCCAAGATCCCCGACGCCAAGGGGCC
GAAGTTCTCCGGCTGCAACACCTGCCACCCCGGCAACCACGTGAGCGACGTGGGGAGCACCGGCCCCGAGGCCGAGGCGG
CCATCGACTGCCTGCTCTGCCATTCCCGCGAGTACGACTACAGCAAGCGCAAACCCTTCAAGGATGACCAGGGGCGGGTC
GTGCTCGGGCAGGACCGCAGTGTCAAGGCGGCGCTCGCCATCGCGAAGCCGACGGTCAAGAACTGCATGACATGTCACGA
GGCGGCCGGTGGCGGCGTGCTGGTGAAGCGCGGGTTCGCCTTCACGAAAGAGAACGATGTCCACGCCGCCAAGGGGATGG
TCTGCGTCGACTGCCACAAGGCAAAGAACCACAAGATCCCCACTGGCTTTGATCCCAACAACTGGGCCCACGATGGGGTA
CGGGTTGCCTGCACCGACTGCCACACGGAAACCCCCCACAAGGATGCGGAGTACAACCGGCATACTGCCCGCATCGCCTG
CCAGACCTGCCACGTGACCAGAACCGGCGGCGCCTTCGCCAAGGATTTCACCAAGTGGGAGAAGCTCTCCAGCGGCTACT
ACGAGCCGACCACCCTCCGCAAGGATGCCAACGAAACGGTGCCGGTCTATGCGTGGTACGACAAGACCGTTGCCAACCGG
CCAGACTTCATCGGCCCGAAGGGAAGCCGGAGTGACAAGGCCAGCAGGATTTACCCCTTCAAAGTCTTCCAGGGGAAAGG
GTTCTTCGACCGCAAGACCGGCAAACTGCTTTCCATGGACTTCGCCCCGCCCATGGCAAACGGCGACACCCTGGCCGGCG
TGGCCTCGGCGGCAAAGATCCTCGGCATCAAGCAGTACGACCCGGTTCCCGGCTGGCAGACCATCATGTTCGGCAGCAAT
CACCTGGTGACGAAAAAGAATGCCCTGACCTGCAACAACTGCCATGCCCCCAACGGGGTGCTCCGGTTCAAGGAGCTGGG
CTATTCGGACGATGAGGTGAAGCGGCTGACCAGTCCGGAGTTGTATCTCCAGAAGATGGCGGAGAAACAGCGGGAAGAGT
GGTAG

Upstream 100 bases:

>100_bases
TCTCCTGTAGTTTCCCGACGTATATTTCATTCATTTATCTATATAGACAAAAATTACAGGTTCCTCAGCTCGTGGGGGAC
CGGAGTGAGAGGATAGAGAT

Downstream 100 bases:

>100_bases
ATGCAACGGAGTCACTTGCTTGATCTGGCTGATTGCGCATGATTAATGTGCCAAAATTATTTTTAAACACGCTCAAGTTG
TGCAGATTTTGCCGATAAGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MIKILFTGLVAGAVMASAAFAKDHPGREYMEKNGYKGPETCEVCHPGKAKEFLSTVHWTHASKVDNVENTDPTREYGMKN
RIYTMCNGNDIVNNLKEIPKIPDAKGPKFSGCNTCHPGNHVSDVGSTGPEAEAAIDCLLCHSREYDYSKRKPFKDDQGRV
VLGQDRSVKAALAIAKPTVKNCMTCHEAAGGGVLVKRGFAFTKENDVHAAKGMVCVDCHKAKNHKIPTGFDPNNWAHDGV
RVACTDCHTETPHKDAEYNRHTARIACQTCHVTRTGGAFAKDFTKWEKLSSGYYEPTTLRKDANETVPVYAWYDKTVANR
PDFIGPKGSRSDKASRIYPFKVFQGKGFFDRKTGKLLSMDFAPPMANGDTLAGVASAAKILGIKQYDPVPGWQTIMFGSN
HLVTKKNALTCNNCHAPNGVLRFKELGYSDDEVKRLTSPELYLQKMAEKQREEW

Sequences:

>Translated_454_residues
MIKILFTGLVAGAVMASAAFAKDHPGREYMEKNGYKGPETCEVCHPGKAKEFLSTVHWTHASKVDNVENTDPTREYGMKN
RIYTMCNGNDIVNNLKEIPKIPDAKGPKFSGCNTCHPGNHVSDVGSTGPEAEAAIDCLLCHSREYDYSKRKPFKDDQGRV
VLGQDRSVKAALAIAKPTVKNCMTCHEAAGGGVLVKRGFAFTKENDVHAAKGMVCVDCHKAKNHKIPTGFDPNNWAHDGV
RVACTDCHTETPHKDAEYNRHTARIACQTCHVTRTGGAFAKDFTKWEKLSSGYYEPTTLRKDANETVPVYAWYDKTVANR
PDFIGPKGSRSDKASRIYPFKVFQGKGFFDRKTGKLLSMDFAPPMANGDTLAGVASAAKILGIKQYDPVPGWQTIMFGSN
HLVTKKNALTCNNCHAPNGVLRFKELGYSDDEVKRLTSPELYLQKMAEKQREEW
>Mature_454_residues
MIKILFTGLVAGAVMASAAFAKDHPGREYMEKNGYKGPETCEVCHPGKAKEFLSTVHWTHASKVDNVENTDPTREYGMKN
RIYTMCNGNDIVNNLKEIPKIPDAKGPKFSGCNTCHPGNHVSDVGSTGPEAEAAIDCLLCHSREYDYSKRKPFKDDQGRV
VLGQDRSVKAALAIAKPTVKNCMTCHEAAGGGVLVKRGFAFTKENDVHAAKGMVCVDCHKAKNHKIPTGFDPNNWAHDGV
RVACTDCHTETPHKDAEYNRHTARIACQTCHVTRTGGAFAKDFTKWEKLSSGYYEPTTLRKDANETVPVYAWYDKTVANR
PDFIGPKGSRSDKASRIYPFKVFQGKGFFDRKTGKLLSMDFAPPMANGDTLAGVASAAKILGIKQYDPVPGWQTIMFGSN
HLVTKKNALTCNNCHAPNGVLRFKELGYSDDEVKRLTSPELYLQKMAEKQREEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023155
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50219; Mature: 50219

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKILFTGLVAGAVMASAAFAKDHPGREYMEKNGYKGPETCEVCHPGKAKEFLSTVHWTH
CEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ASKVDNVENTDPTREYGMKNRIYTMCNGNDIVNNLKEIPKIPDAKGPKFSGCNTCHPGNH
HHHCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VSDVGSTGPEAEAAIDCLLCHSREYDYSKRKPFKDDQGRVVLGQDRSVKAALAIAKPTVK
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEECCCCCCEEEEEECCCHHH
NCMTCHEAAGGGVLVKRGFAFTKENDVHAAKGMVCVDCHKAKNHKIPTGFDPNNWAHDGV
HHHHHHHCCCCCEEEECCEEECCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCE
RVACTDCHTETPHKDAEYNRHTARIACQTCHVTRTGGAFAKDFTKWEKLSSGYYEPTTLR
EEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
KDANETVPVYAWYDKTVANRPDFIGPKGSRSDKASRIYPFKVFQGKGFFDRKTGKLLSMD
CCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
FAPPMANGDTLAGVASAAKILGIKQYDPVPGWQTIMFGSNHLVTKKNALTCNNCHAPNGV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCCEEECCCCCCCCE
LRFKELGYSDDEVKRLTSPELYLQKMAEKQREEW
EHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKILFTGLVAGAVMASAAFAKDHPGREYMEKNGYKGPETCEVCHPGKAKEFLSTVHWTH
CEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ASKVDNVENTDPTREYGMKNRIYTMCNGNDIVNNLKEIPKIPDAKGPKFSGCNTCHPGNH
HHHCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VSDVGSTGPEAEAAIDCLLCHSREYDYSKRKPFKDDQGRVVLGQDRSVKAALAIAKPTVK
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEECCCCCCEEEEEECCCHHH
NCMTCHEAAGGGVLVKRGFAFTKENDVHAAKGMVCVDCHKAKNHKIPTGFDPNNWAHDGV
HHHHHHHCCCCCEEEECCEEECCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCE
RVACTDCHTETPHKDAEYNRHTARIACQTCHVTRTGGAFAKDFTKWEKLSSGYYEPTTLR
EEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
KDANETVPVYAWYDKTVANRPDFIGPKGSRSDKASRIYPFKVFQGKGFFDRKTGKLLSMD
CCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
FAPPMANGDTLAGVASAAKILGIKQYDPVPGWQTIMFGSNHLVTKKNALTCNNCHAPNGV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCCEEECCCCCCCCE
LRFKELGYSDDEVKRLTSPELYLQKMAEKQREEW
EHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]