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The map label for this gene is 78224278

Identifier: 78224278

GI number: 78224278

Start: 3485051

End: 3486055

Strand: Reverse

Name: 78224278

Synonym: Gmet_3086

Alternate gene names: NA

Gene position: 3486055-3485051 (Counterclockwise)

Preceding gene: 78224279

Following gene: 78224277

Centisome position: 87.21

GC content: 66.67

Gene sequence:

>1005_bases
ATGCAGAAGGGAAAGCCGGCCAAGAAGTACTCCCAGGCAGGGAGGGTCCATGACCTCATCCGCCTCATCGAGGCGCGTCA
CGGGGTCACCCTCGACGAGATGGCCGAGGAGACCGGAGTGGACCGCCGCACCGTCCACCGGGACCTGAACGTCATCCACG
AGGCGGGGTATCCGCTGATTTCCGAATGGCTGAACGGTCGCAAGGCCTATCGCTTCCTCACCCGCTTCAAGGATGTCCCC
CCCATCACCTTCACCCTCCAGGAGCTCATGGCTCTCTCCTTTTTCCGCTCCCAGCTCTCCTTTCTCGACGGAACTCCCTT
CCGGGAGGATCTCGATGCGGTCTTCCGCAAGATCAATTCGGTGCTTCCCCCCCGCTACGCGGCCCACATGGAGCGGATCG
CCGACGTGTCGCTGCCGCTTTTGCAGGGGCGGCGCGACTACGCCCCGGTGGCCGGGCACCTGGAGAGCCTGCGGGACGCC
CTCATCTACCAGTACCGGGTGCGGCTCTCCTACCGGGGAGCGGGGAAGGGGAGGGCCAGCACCTACGAGGTGGACCCCTA
CACCCTGGTCTTCTACAAGGGGGGGCTCTACCTGGTGGGGTATGCCCATAACCGCCAGGCCCTGCGGACCTTTGCCGCCG
AGCGGATCACCGGCGTGGAGGTGCGGAAGGAGCGCTTCGAGATTCCCGCCGACTACCGCCCCGAGGAGCGGCTCAGGGGG
GCCTTCGGCATCGTGGAGGAGGAGCCCCTGGAGGTGATGATCCGCTTTTCCCCCGGGGTCGCCCACGCGGTCCGGGGGCG
GGTCTGGCACCCGAGTCAGACGGAGCGGAGCGGAGCCGACGGAAGCCTCGTCCTCTCCTTCACTGCCGGAGGGAAAATGG
AGATCGTCTCCTGGGTCCTCTCCTACGGCGAGCATGCCGAGGTGCTGGCGCCTGCCTCCCTGCGGGATGAGGTCGGCGCG
GCGGCGCGGCGGATGGCTGAAAAATACGGGGCAAAGACTTCCTGA

Upstream 100 bases:

>100_bases
ATGGTGGGGTGGTTCAGGGTGTAGGAGCCGTTTTTTCTCGTTGCACCTCCCGGCGCTTCAGGTATCATCCCCCCCCAAAG
TCGTCACCGGGAGGTCAACC

Downstream 100 bases:

>100_bases
CCACTGCGGCTAAAGTTTTTTGCCGGCCGGTCGATACGGGTAAATAGAGTGTGAACAATCCGTAGCACGCGGCCCCTCGC
CCCTTCCGGCGCCGCGATGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator-Like Protein; Regulatory Protein DeoR; DeoR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator Protein-Like Protein; GntR Family Transcriptional Regulator; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YobV; HTH Domain Protein; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator-Like; DeoR Family Regulatory Protein; Metal Dependent Phosphohydrolase; Transcription Regulator; Transcriptional Factor

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQKGKPAKKYSQAGRVHDLIRLIEARHGVTLDEMAEETGVDRRTVHRDLNVIHEAGYPLISEWLNGRKAYRFLTRFKDVP
PITFTLQELMALSFFRSQLSFLDGTPFREDLDAVFRKINSVLPPRYAAHMERIADVSLPLLQGRRDYAPVAGHLESLRDA
LIYQYRVRLSYRGAGKGRASTYEVDPYTLVFYKGGLYLVGYAHNRQALRTFAAERITGVEVRKERFEIPADYRPEERLRG
AFGIVEEEPLEVMIRFSPGVAHAVRGRVWHPSQTERSGADGSLVLSFTAGGKMEIVSWVLSYGEHAEVLAPASLRDEVGA
AARRMAEKYGAKTS

Sequences:

>Translated_334_residues
MQKGKPAKKYSQAGRVHDLIRLIEARHGVTLDEMAEETGVDRRTVHRDLNVIHEAGYPLISEWLNGRKAYRFLTRFKDVP
PITFTLQELMALSFFRSQLSFLDGTPFREDLDAVFRKINSVLPPRYAAHMERIADVSLPLLQGRRDYAPVAGHLESLRDA
LIYQYRVRLSYRGAGKGRASTYEVDPYTLVFYKGGLYLVGYAHNRQALRTFAAERITGVEVRKERFEIPADYRPEERLRG
AFGIVEEEPLEVMIRFSPGVAHAVRGRVWHPSQTERSGADGSLVLSFTAGGKMEIVSWVLSYGEHAEVLAPASLRDEVGA
AARRMAEKYGAKTS
>Mature_334_residues
MQKGKPAKKYSQAGRVHDLIRLIEARHGVTLDEMAEETGVDRRTVHRDLNVIHEAGYPLISEWLNGRKAYRFLTRFKDVP
PITFTLQELMALSFFRSQLSFLDGTPFREDLDAVFRKINSVLPPRYAAHMERIADVSLPLLQGRRDYAPVAGHLESLRDA
LIYQYRVRLSYRGAGKGRASTYEVDPYTLVFYKGGLYLVGYAHNRQALRTFAAERITGVEVRKERFEIPADYRPEERLRG
AFGIVEEEPLEVMIRFSPGVAHAVRGRVWHPSQTERSGADGSLVLSFTAGGKMEIVSWVLSYGEHAEVLAPASLRDEVGA
AARRMAEKYGAKTS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37772; Mature: 37772

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKGKPAKKYSQAGRVHDLIRLIEARHGVTLDEMAEETGVDRRTVHRDLNVIHEAGYPLI
CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
SEWLNGRKAYRFLTRFKDVPPITFTLQELMALSFFRSQLSFLDGTPFREDLDAVFRKINS
HHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VLPPRYAAHMERIADVSLPLLQGRRDYAPVAGHLESLRDALIYQYRVRLSYRGAGKGRAS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
TYEVDPYTLVFYKGGLYLVGYAHNRQALRTFAAERITGVEVRKERFEIPADYRPEERLRG
EEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
AFGIVEEEPLEVMIRFSPGVAHAVRGRVWHPSQTERSGADGSLVLSFTAGGKMEIVSWVL
HHCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
SYGEHAEVLAPASLRDEVGAAARRMAEKYGAKTS
HCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQKGKPAKKYSQAGRVHDLIRLIEARHGVTLDEMAEETGVDRRTVHRDLNVIHEAGYPLI
CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
SEWLNGRKAYRFLTRFKDVPPITFTLQELMALSFFRSQLSFLDGTPFREDLDAVFRKINS
HHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VLPPRYAAHMERIADVSLPLLQGRRDYAPVAGHLESLRDALIYQYRVRLSYRGAGKGRAS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
TYEVDPYTLVFYKGGLYLVGYAHNRQALRTFAAERITGVEVRKERFEIPADYRPEERLRG
EEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
AFGIVEEEPLEVMIRFSPGVAHAVRGRVWHPSQTERSGADGSLVLSFTAGGKMEIVSWVL
HHCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
SYGEHAEVLAPASLRDEVGAAARRMAEKYGAKTS
HCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA