Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222682
Identifier: 78222682
GI number: 78222682
Start: 1653221
End: 1653532
Strand: Reverse
Name: 78222682
Synonym: Gmet_1470
Alternate gene names: NA
Gene position: 1653532-1653221 (Counterclockwise)
Preceding gene: 78222683
Following gene: 78222677
Centisome position: 41.36
GC content: 53.85
Gene sequence:
>312_bases ATGGGAACAGATTTCCGAGTTGTGGTTACGCGTGAAGGGCTTACCGATGTCGTCCGTTTTTACGGAAACATCGACGCCAG CGCAGAGCAGTCAGTCCGCGAGTTGTCCGCGAGAGTGAATGGGCCGAACGTCCGGTGCGATTTCAGCGATTCCGGCAGGA TCAACTCCATGGGGATTGCCTTTCTCCTCAGATTTCTGAAGGATCTCAGGGATGACAAAGATGCCCGGATTACCATCCGG GGACTTAGCCAGGTAAACGCGATTCTGTTCAAGATGACCGGCATTTTCCTCCTGGCCTCCCTCGAACAATGA
Upstream 100 bases:
>100_bases GATTCCACATAACAGCGTTGCGCGACTGCGCCTGAACACTGACATTACAGTGCATCACTCAGGGAGGAGGGAGGCATACA ACTAAAAAGGAGGACTAATT
Downstream 100 bases:
>100_bases ATTGCCCCGACTCAAAGGAGCACTCCCATGAAGTTACTGAACTGGAAACTGACCATAGGCGGTCTCTCCGAGTTGGATTG TCAGATCGAAAAGCTGCGGA
Product: anti-sigma-factor antagonist domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGTDFRVVVTREGLTDVVRFYGNIDASAEQSVRELSARVNGPNVRCDFSDSGRINSMGIAFLLRFLKDLRDDKDARITIR GLSQVNAILFKMTGIFLLASLEQ
Sequences:
>Translated_103_residues MGTDFRVVVTREGLTDVVRFYGNIDASAEQSVRELSARVNGPNVRCDFSDSGRINSMGIAFLLRFLKDLRDDKDARITIR GLSQVNAILFKMTGIFLLASLEQ >Mature_102_residues GTDFRVVVTREGLTDVVRFYGNIDASAEQSVRELSARVNGPNVRCDFSDSGRINSMGIAFLLRFLKDLRDDKDARITIRG LSQVNAILFKMTGIFLLASLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11500; Mature: 11369
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDFRVVVTREGLTDVVRFYGNIDASAEQSVRELSARVNGPNVRCDFSDSGRINSMGIA CCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHH FLLRFLKDLRDDKDARITIRGLSQVNAILFKMTGIFLLASLEQ HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTDFRVVVTREGLTDVVRFYGNIDASAEQSVRELSARVNGPNVRCDFSDSGRINSMGIA CCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHH FLLRFLKDLRDDKDARITIRGLSQVNAILFKMTGIFLLASLEQ HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA