Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222677
Identifier: 78222677
GI number: 78222677
Start: 1646188
End: 1647978
Strand: Reverse
Name: 78222677
Synonym: Gmet_1465
Alternate gene names: NA
Gene position: 1647978-1646188 (Counterclockwise)
Preceding gene: 78222682
Following gene: 78222666
Centisome position: 41.23
GC content: 63.04
Gene sequence:
>1791_bases ATGACAGGCAATCGTAAAGCGCTCGCTGCAGCACTGGCGGTAACCGTGATTACCGCCGGCAACGCCCTTGCCGCCGAGAA GTGGATGACCGGCGACTTCCATCAGCATACCTACTTCACCGACGGCAGCTACACCATGAACGACCTGGACGCACCCGGCG TACCCGCGGCGGCAGCCAGAACCGCTCCCTGGAAAAAAGGGGTCATGCCCCAGGGGTTCCGCTTCGGCCTCGACTTCCAG GCGAACTCCGAGCATGGCGGAGTCCGGAACCGGGACGGATTCGGCAACAAGTGGACGACATTTGCTTCCCTCCCCTCCGT CGGGGATCCCAACCCCGCAGCGGCGCCGGCCAACATGTGGCGCTGGCAGTCCCTGCTTCGCACCTCTGACATCCCGGGCT ACACCGGCCCGGCCTACCTGGGGGCCTACGACTGGCTCCTCGGCATCCGCGCCAACTACCCCGACAAACTCGCCATGACC GGCATGGAGTGGAACCCGCCGGGGCATGAGCACAGCAGCACCGGCATCGCTGCCGCCGATGCCCGCCCCATCGCCGAGTT CGAATACCGCTTCGACAAGTCCGATTCCGACGGCACCGCCACTACCGCCACGGCCGATACCATGGGGTGGCAAGGAAAGC TCCAGAACAGCGCATACACGGCCCCCGACTACTCCGCGGTACTGGCCCTGAACGCCCTCCACAATAAGACCATCGACGCG GTCAGGTGGATGCAGGCAAACTATCCGGCCACCGGCTGGATAATTCCGGCCCACGTGGAACGGGCCGGCTGCGGCGTTAA CGCCTGGTCCATCGCCGCATTCCGCGACATGAACGACAACGGCCCCGCCGTCGCCTTCGGCTTTGAGGGAATCCCCGGTC ACGAAAAGGCTGCCAACCGCGGCGAGTTCGGCACCGGCGCCTGTGGGGGCGGCACCTATGGCGGAGCCGGCAAATACATT GCGGAAGTCGGCGGGCTCTGGGATAACCTGCTGGCCGACGGCAGGTATTTCTTCAACTTTGCCAGCTCCGATTTCCATAA CGATGCCGGCGCCGATTTCTGGCCGGGCGAGTATCTCAAGACCCACGTGAAGGTGAAGGATCTCGATGATGACGGCATCT ACTCTCAGGAAGAGGTCGTCGCCGGCCTGCGGTCGGGGAACGCGTTTTCCGTCCATGGCGACCTGATCAACGAGCTGGAC TTCAGGGTCTTCCACGGGGCCGCCCCGGACAAGAAAGCAGCCCAAGGCTACAACAACGCCACCATGGGCGAAACCCTCCC CGTCGAGAAGGGAGACAAGATCACCGTCAAGATCCGTTTCAAAACACCGGCAACCAACAATTGCCAGGCCGGCGTCAACG CCTCTGCCGACTACCAGTGCAAGGCCCCGTCGGTGCACCACGTCCAGCTGATCCAGGGACGGATCAACCCGACCAGGGCA AGCAAGCTCATGGCTGACAATGTGACCCCGAACCCCGCGTTCAATGTCATCGACACCACCGTGGCCGGCGTGGTCAAGAC CTTTGACGCCGCTTCCTGGAGCACCGACGCTGAAGGGTACACCACCATGACCTTCACTGTGCCGGCGGTCGAGAACGACA TATTCTTCCGCATTCGCGGCACCAATCTCGGCTATGACGTGAAAAAGATGGACCCGACCGGCACCCAAATCGTTTACGGC ACCGACGCCGCCGGCAATCCGCTGCTCAACACCCCCGGCACCAACACTGCCGACATGGCCTGGGACGATCTCTGGTTCTA CAGCAACCCGATCTTCGTCAAGGCGCAGTAG
Upstream 100 bases:
>100_bases TCAGCAAATTGTTAGTCAATTGCCATGAAACCGACATAACCACAAGGCATAGTCACATCACGGGAATACCCGCAGCCAAA AACGAGGAGGAACGGATTCA
Downstream 100 bases:
>100_bases AAGCTATTCGGAATATGGTAGTAAGAGGCATCTGCCAACGAAAAAACCCGAATCGGGATTTCCCGGTCCGGGTTTTTTCG TAGCAATACAGACAACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: S-Layer Domain Protein; Signal Peptide; Php Domain Protein; Phosphoesterase PHP Domain Protein
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MTGNRKALAAALAVTVITAGNALAAEKWMTGDFHQHTYFTDGSYTMNDLDAPGVPAAAARTAPWKKGVMPQGFRFGLDFQ ANSEHGGVRNRDGFGNKWTTFASLPSVGDPNPAAAPANMWRWQSLLRTSDIPGYTGPAYLGAYDWLLGIRANYPDKLAMT GMEWNPPGHEHSSTGIAAADARPIAEFEYRFDKSDSDGTATTATADTMGWQGKLQNSAYTAPDYSAVLALNALHNKTIDA VRWMQANYPATGWIIPAHVERAGCGVNAWSIAAFRDMNDNGPAVAFGFEGIPGHEKAANRGEFGTGACGGGTYGGAGKYI AEVGGLWDNLLADGRYFFNFASSDFHNDAGADFWPGEYLKTHVKVKDLDDDGIYSQEEVVAGLRSGNAFSVHGDLINELD FRVFHGAAPDKKAAQGYNNATMGETLPVEKGDKITVKIRFKTPATNNCQAGVNASADYQCKAPSVHHVQLIQGRINPTRA SKLMADNVTPNPAFNVIDTTVAGVVKTFDAASWSTDAEGYTTMTFTVPAVENDIFFRIRGTNLGYDVKKMDPTGTQIVYG TDAAGNPLLNTPGTNTADMAWDDLWFYSNPIFVKAQ
Sequences:
>Translated_596_residues MTGNRKALAAALAVTVITAGNALAAEKWMTGDFHQHTYFTDGSYTMNDLDAPGVPAAAARTAPWKKGVMPQGFRFGLDFQ ANSEHGGVRNRDGFGNKWTTFASLPSVGDPNPAAAPANMWRWQSLLRTSDIPGYTGPAYLGAYDWLLGIRANYPDKLAMT GMEWNPPGHEHSSTGIAAADARPIAEFEYRFDKSDSDGTATTATADTMGWQGKLQNSAYTAPDYSAVLALNALHNKTIDA VRWMQANYPATGWIIPAHVERAGCGVNAWSIAAFRDMNDNGPAVAFGFEGIPGHEKAANRGEFGTGACGGGTYGGAGKYI AEVGGLWDNLLADGRYFFNFASSDFHNDAGADFWPGEYLKTHVKVKDLDDDGIYSQEEVVAGLRSGNAFSVHGDLINELD FRVFHGAAPDKKAAQGYNNATMGETLPVEKGDKITVKIRFKTPATNNCQAGVNASADYQCKAPSVHHVQLIQGRINPTRA SKLMADNVTPNPAFNVIDTTVAGVVKTFDAASWSTDAEGYTTMTFTVPAVENDIFFRIRGTNLGYDVKKMDPTGTQIVYG TDAAGNPLLNTPGTNTADMAWDDLWFYSNPIFVKAQ >Mature_595_residues TGNRKALAAALAVTVITAGNALAAEKWMTGDFHQHTYFTDGSYTMNDLDAPGVPAAAARTAPWKKGVMPQGFRFGLDFQA NSEHGGVRNRDGFGNKWTTFASLPSVGDPNPAAAPANMWRWQSLLRTSDIPGYTGPAYLGAYDWLLGIRANYPDKLAMTG MEWNPPGHEHSSTGIAAADARPIAEFEYRFDKSDSDGTATTATADTMGWQGKLQNSAYTAPDYSAVLALNALHNKTIDAV RWMQANYPATGWIIPAHVERAGCGVNAWSIAAFRDMNDNGPAVAFGFEGIPGHEKAANRGEFGTGACGGGTYGGAGKYIA EVGGLWDNLLADGRYFFNFASSDFHNDAGADFWPGEYLKTHVKVKDLDDDGIYSQEEVVAGLRSGNAFSVHGDLINELDF RVFHGAAPDKKAAQGYNNATMGETLPVEKGDKITVKIRFKTPATNNCQAGVNASADYQCKAPSVHHVQLIQGRINPTRAS KLMADNVTPNPAFNVIDTTVAGVVKTFDAASWSTDAEGYTTMTFTVPAVENDIFFRIRGTNLGYDVKKMDPTGTQIVYGT DAAGNPLLNTPGTNTADMAWDDLWFYSNPIFVKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64121; Mature: 63989
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNRKALAAALAVTVITAGNALAAEKWMTGDFHQHTYFTDGSYTMNDLDAPGVPAAAAR CCCCHHHHHHHEEEEEEECCCCHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCHHHCC TAPWKKGVMPQGFRFGLDFQANSEHGGVRNRDGFGNKWTTFASLPSVGDPNPAAAPANMW CCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH RWQSLLRTSDIPGYTGPAYLGAYDWLLGIRANYPDKLAMTGMEWNPPGHEHSSTGIAAAD HHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCCCCCEEECC ARPIAEFEYRFDKSDSDGTATTATADTMGWQGKLQNSAYTAPDYSAVLALNALHNKTIDA CCCCEEEEEEECCCCCCCCEEEEEHHCCCCCCEECCCCCCCCCCCEEEEEHHHHCCHHHH VRWMQANYPATGWIIPAHVERAGCGVNAWSIAAFRDMNDNGPAVAFGFEGIPGHEKAANR HHHHHCCCCCCCCEEECCHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHCCC GEFGTGACGGGTYGGAGKYIAEVGGLWDNLLADGRYFFNFASSDFHNDAGADFWPGEYLK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHE THVKVKDLDDDGIYSQEEVVAGLRSGNAFSVHGDLINELDFRVFHGAAPDKKAAQGYNNA EEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCCHHHHCCCCCC TMGETLPVEKGDKITVKIRFKTPATNNCQAGVNASADYQCKAPSVHHVQLIQGRINPTRA CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHH SKLMADNVTPNPAFNVIDTTVAGVVKTFDAASWSTDAEGYTTMTFTVPAVENDIFFRIRG HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEC TNLGYDVKKMDPTGTQIVYGTDAAGNPLLNTPGTNTADMAWDDLWFYSNPIFVKAQ CCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEECCEEEEEEC >Mature Secondary Structure TGNRKALAAALAVTVITAGNALAAEKWMTGDFHQHTYFTDGSYTMNDLDAPGVPAAAAR CCCHHHHHHHEEEEEEECCCCHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCHHHCC TAPWKKGVMPQGFRFGLDFQANSEHGGVRNRDGFGNKWTTFASLPSVGDPNPAAAPANMW CCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH RWQSLLRTSDIPGYTGPAYLGAYDWLLGIRANYPDKLAMTGMEWNPPGHEHSSTGIAAAD HHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCCCCCEEECC ARPIAEFEYRFDKSDSDGTATTATADTMGWQGKLQNSAYTAPDYSAVLALNALHNKTIDA CCCCEEEEEEECCCCCCCCEEEEEHHCCCCCCEECCCCCCCCCCCEEEEEHHHHCCHHHH VRWMQANYPATGWIIPAHVERAGCGVNAWSIAAFRDMNDNGPAVAFGFEGIPGHEKAANR HHHHHCCCCCCCCEEECCHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHCCC GEFGTGACGGGTYGGAGKYIAEVGGLWDNLLADGRYFFNFASSDFHNDAGADFWPGEYLK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHE THVKVKDLDDDGIYSQEEVVAGLRSGNAFSVHGDLINELDFRVFHGAAPDKKAAQGYNNA EEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCEEEEECCCCCHHHHCCCCCC TMGETLPVEKGDKITVKIRFKTPATNNCQAGVNASADYQCKAPSVHHVQLIQGRINPTRA CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHH SKLMADNVTPNPAFNVIDTTVAGVVKTFDAASWSTDAEGYTTMTFTVPAVENDIFFRIRG HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEC TNLGYDVKKMDPTGTQIVYGTDAAGNPLLNTPGTNTADMAWDDLWFYSNPIFVKAQ CCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA