Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222683
Identifier: 78222683
GI number: 78222683
Start: 1653598
End: 1654566
Strand: Reverse
Name: 78222683
Synonym: Gmet_1471
Alternate gene names: NA
Gene position: 1654566-1653598 (Counterclockwise)
Preceding gene: 78222684
Following gene: 78222682
Centisome position: 41.39
GC content: 58.41
Gene sequence:
>969_bases ATGAACACCCCATCCCTTGCTTTTTTCAGAAATGATGCCGACGAACGGCTTTGGAAGGCCGACCTGGAAGCCATCCCCGG AATGATCTCTATCGTGACGGGAGAATCTCCCCTTTTGTCGGTGAACAAAGCGTGGGGGTTGGCGCCGAGCCCCCAGTTCA TCCTGCTGTCAGCCTCCTTTTATCCCGACAGGGGGGTTGGCATCACAACTCTCATCAGGAGCCTCTTTCCCGGCACGGAG ATTCTGCTTATCTCGCCGGCATCCGAGCCGTTCCCCGACATCGGCCCGCTCTTCAGGGACGGGATCGTGAACCTTGTCGT GGCGCCGACACGGCTCTCTCCAAAGAGTTACTGTCCCGTGGAATCCACCCTGAGCATTGCCGTTGCATCCATCGCGGCCG GCAGGAATGAGCGGATGTCCGCCTGTCTCAGACAGGGAACAGAGGTCAGCGAATTTACCCTCACCTCCAGTAGCCAGAAA GAAACCCTCATAGGGCTTCTGGAAAAGGCTGTGAATGGTAAGACGACCGAAGCCGAATTCCTGCGGCAACGGGCAGCGCT CATTGCTGACGAGATGATCGAGAATGCCCTTTACGGAGCACCCCGTGATCACCAGGGCACTCGAATCTTCCGCAAGGGTG AACTCCGTGAGATTCTTCCCGACGAGCGAATTGTGTTTCGCTTTGGCTTCGACGGAGAAAACCTGGCCCTGGAGGTCAGA GACGGTTGGGGCAGCCTCCGGCCGGAAGATATCCTTGACCATCTCAGCAAAAACAGGGCACGGGACGGGATTCCGCCCAC TGACGGGGGATTGGGCCTGTTTCTCATCTGGCGCTTCGTCGACCACCTCCATGTCTCCATCACGCCGGGAAGAGAGACCG TCGTACGTGGTCATGTGCGTCTCGCCCGCTGCGAAGATCTGCCCGAGGCGAAGGGATTCCACATAACAGCGTTGCGCGAC TGCGCCTGA
Upstream 100 bases:
>100_bases TCACGGACATTCACTCGTTTGCCGCCAGCGAAGCCCTCGATGACGATGTCGCACTCCTGATCGCCTCGTTCGACGGTTGT GCCCCTGAGGTACCATGAGC
Downstream 100 bases:
>100_bases ACACTGACATTACAGTGCATCACTCAGGGAGGAGGGAGGCATACAACTAAAAAGGAGGACTAATTATGGGAACAGATTTC CGAGTTGTGGTTACGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNTPSLAFFRNDADERLWKADLEAIPGMISIVTGESPLLSVNKAWGLAPSPQFILLSASFYPDRGVGITTLIRSLFPGTE ILLISPASEPFPDIGPLFRDGIVNLVVAPTRLSPKSYCPVESTLSIAVASIAAGRNERMSACLRQGTEVSEFTLTSSSQK ETLIGLLEKAVNGKTTEAEFLRQRAALIADEMIENALYGAPRDHQGTRIFRKGELREILPDERIVFRFGFDGENLALEVR DGWGSLRPEDILDHLSKNRARDGIPPTDGGLGLFLIWRFVDHLHVSITPGRETVVRGHVRLARCEDLPEAKGFHITALRD CA
Sequences:
>Translated_322_residues MNTPSLAFFRNDADERLWKADLEAIPGMISIVTGESPLLSVNKAWGLAPSPQFILLSASFYPDRGVGITTLIRSLFPGTE ILLISPASEPFPDIGPLFRDGIVNLVVAPTRLSPKSYCPVESTLSIAVASIAAGRNERMSACLRQGTEVSEFTLTSSSQK ETLIGLLEKAVNGKTTEAEFLRQRAALIADEMIENALYGAPRDHQGTRIFRKGELREILPDERIVFRFGFDGENLALEVR DGWGSLRPEDILDHLSKNRARDGIPPTDGGLGLFLIWRFVDHLHVSITPGRETVVRGHVRLARCEDLPEAKGFHITALRD CA >Mature_322_residues MNTPSLAFFRNDADERLWKADLEAIPGMISIVTGESPLLSVNKAWGLAPSPQFILLSASFYPDRGVGITTLIRSLFPGTE ILLISPASEPFPDIGPLFRDGIVNLVVAPTRLSPKSYCPVESTLSIAVASIAAGRNERMSACLRQGTEVSEFTLTSSSQK ETLIGLLEKAVNGKTTEAEFLRQRAALIADEMIENALYGAPRDHQGTRIFRKGELREILPDERIVFRFGFDGENLALEVR DGWGSLRPEDILDHLSKNRARDGIPPTDGGLGLFLIWRFVDHLHVSITPGRETVVRGHVRLARCEDLPEAKGFHITALRD CA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35429; Mature: 35429
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPSLAFFRNDADERLWKADLEAIPGMISIVTGESPLLSVNKAWGLAPSPQFILLSASF CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHCCCCCCCCCEEEEEECC YPDRGVGITTLIRSLFPGTEILLISPASEPFPDIGPLFRDGIVNLVVAPTRLSPKSYCPV CCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCC ESTLSIAVASIAAGRNERMSACLRQGTEVSEFTLTSSSQKETLIGLLEKAVNGKTTEAEF HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHH LRQRAALIADEMIENALYGAPRDHQGTRIFRKGELREILPDERIVFRFGFDGENLALEVR HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHCCCCEEEEEECCCCCCEEEEEE DGWGSLRPEDILDHLSKNRARDGIPPTDGGLGLFLIWRFVDHLHVSITPGRETVVRGHVR CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHCEE LARCEDLPEAKGFHITALRDCA EEHHCCCCCCCCEEEEEECCCC >Mature Secondary Structure MNTPSLAFFRNDADERLWKADLEAIPGMISIVTGESPLLSVNKAWGLAPSPQFILLSASF CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEHHCCCCCCCCCEEEEEECC YPDRGVGITTLIRSLFPGTEILLISPASEPFPDIGPLFRDGIVNLVVAPTRLSPKSYCPV CCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCC ESTLSIAVASIAAGRNERMSACLRQGTEVSEFTLTSSSQKETLIGLLEKAVNGKTTEAEF HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHH LRQRAALIADEMIENALYGAPRDHQGTRIFRKGELREILPDERIVFRFGFDGENLALEVR HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHCCCCEEEEEECCCCCCEEEEEE DGWGSLRPEDILDHLSKNRARDGIPPTDGGLGLFLIWRFVDHLHVSITPGRETVVRGHVR CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHCEE LARCEDLPEAKGFHITALRDCA EEHHCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA