Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is 78222507

Identifier: 78222507

GI number: 78222507

Start: 1453010

End: 1454095

Strand: Direct

Name: 78222507

Synonym: Gmet_1293

Alternate gene names: NA

Gene position: 1453010-1454095 (Clockwise)

Preceding gene: 78222504

Following gene: 78222508

Centisome position: 36.35

GC content: 59.76

Gene sequence:

>1086_bases
ATGGGACCGCTGAAGATCGGCAAGCATGAGGCAAGGTATCCGCTCATCCAGGGAGGGATGGGGGTTCGCATCTCAGGGTG
GAGGCTTGCGGGGCACGTGGCCAGGTGCGGCGGCGTGGGGCTCGTGGCCACTGCCGGCATTACTCTCAACAGCGGCCTCT
ACACCGGTTCTAATTACCTCCAGTCCAATCCAGAGGCGCTTCGACAGGAGCTGCGCAAGGCTTACGAAGTTGCTCCCGAC
GGGGTAATCGGCGTTAACATCATGGTGGCGCTCGCCGATTATGAAGAGCTCGTCCAGGCTTCCATCGAGGGTGGCGCCAA
GGTGATAGTCTGCGGAGCGGGTCTGCCCATGACGCTTCCCGGCCTTACCGCCCACGCCCCTGATGTGGCCATCGTACCGA
TCGTGTCCTCGCTTCGTGCTGCCCAGCTCATCGCCAAAAAGTGGGATAAAGGATACGGCCGTCTTCCCGATGCGGTTGTT
GTGGAAGACCCCGACACCGCCGGCGGTCACCTGGGTGAAAAGCTGGAAAACATCGGTACCGGTGACTATGACCAGTACGG
CACCATCCGGTCCATAAAGGAATTCTTCCGCTCCGAATACGGTAAAGAGATACCGATTATCGCCGCAGGGGGTATTTGGG
ACCGTGCCGACGTCCTCCACGCCATTGCCGAAGGGGCCGACGGTGTTCAGATGGCGAGCCGCTTCGTGCCGACGGTTGAG
TGCGATGCCGAAGACGCCTACAAGCAGATGTACCTCGATTGCCGCAAGGAGGATATCGGCCTCATCATGAGCCCGGCGGG
GCTTCCGGGGCGAGCCATCCTCAGCAATCAGGAGAATATAACTCTTTATGATGAGACAAACGCAACTTCCTGCAGCAATG
CTTGCCTGAAGAAATGCTCCTACAAGGAAAGCGGCGAGCGGTTTTGCATCGTAAGTGCCCTCGACCGGGCCCAGCAGGGA
GATGTGGAGTCGGGGCTCGTCTTCTGCGGTACCAACGCCTGGAAGGCCGACCGCATCACCACCGTTCAGGAAATCTTCGA
CGAGCTCTTCGCCGAGGAGGCCGGTCAGGCAGAAAAGGCCGCATAA

Upstream 100 bases:

>100_bases
TTGCAAGGGAGGATTTCGTTTTACAAAAGTATTACACATGGAGTGGTTACGATTCTGCTATGGTTGCCGAGGTAAAACAC
ACCGGTAAGGGAGGAATTTG

Downstream 100 bases:

>100_bases
GTCGTTTTCTTTGACGCACAGAGGAAAAGGGGTACCAGCAGGTGCCCCTTTTTTTTGTTGGAGCGGGAATTCGACTTTGA
CCCTGCAGTGCCATAGATGT

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Protein; 2-Nitropropane Dioxygenase Npd; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Enoyl-[Acyl-Carrier Protein] Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-(Acyl-Carrier-Protein) Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Enoyl-Acyl Carrier Protein(ACP) Reductase; 2-Nitropropane Dioxygenase-Releated Protein; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenase/Reductase; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPD
GVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVV
VEDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE
CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQG
DVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA

Sequences:

>Translated_361_residues
MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPD
GVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVV
VEDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE
CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQG
DVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA
>Mature_360_residues
GPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPDG
VIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVV
EDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVEC
DAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQGD
VESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38532; Mature: 38401

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYL
CCCCCCCCCCCCCCEEECCCCEEEECEEHHHHHHHHCCCCEEEECCEEECCCEECCCHHH
QSNPEALRQELRKAYEVAPDGVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLP
CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
GLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVVEDPDTAGGHLGEKLENIGT
CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC
GDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE
CCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCEE
CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCS
CCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHEECCCCCEEEEECCCCCHHHHHHHHHCC
YKESGERFCIVSALDRAQQGDVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKA
CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCC
A
C
>Mature Secondary Structure 
GPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYL
CCCCCCCCCCCCCEEECCCCEEEECEEHHHHHHHHCCCCEEEECCEEECCCEECCCHHH
QSNPEALRQELRKAYEVAPDGVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLP
CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
GLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVVEDPDTAGGHLGEKLENIGT
CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC
GDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE
CCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCEE
CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCS
CCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHEECCCCCEEEEECCCCCHHHHHHHHHCC
YKESGERFCIVSALDRAQQGDVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKA
CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA