Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222410
Identifier: 78222410
GI number: 78222410
Start: 1334409
End: 1335968
Strand: Direct
Name: 78222410
Synonym: Gmet_1195
Alternate gene names: NA
Gene position: 1334409-1335968 (Clockwise)
Preceding gene: 78222404
Following gene: 78222425
Centisome position: 33.38
GC content: 60.83
Gene sequence:
>1560_bases ATGATGAAGAAAAGGTTGGAACGCTTCGTTTGCTCGCTGTTTATGGTCGTGCTCATGGCGGGATATGGCAATGCCGGGAT GATGACAGCTTCGGCCGCTGGGACTGCTCCCTATAAGGAGGGGGAGTTGATCGTGAAGTACCGGGAGGGAGTTTCCGAGG AAGGGAAGGCGGAGGGGCACCGCAGGCACGGCTCGGAGAGGAAGAAGGAATTCCGTGACCTCAACATGGAGCAGGTGAAG ATCAGACCGGGCCTCGGCGTGGAGAATGCCGTAAAAGAGTTCGAGGCGGACGACGATGTGGAGTATGCGGAGCCGAACTA TCTGCTGAAGGCCTCGAAAATTCCCACCGACCCGAAGTTCTACAGCACCTGGGGAATGGCGAAGATCAATGCCCCGGCGG CCTGGGACAATACCACGGGGAGTGCCGGGGTCGTGGTGGCCGTGATCGACAGCGGCGTCGACTACAACCACCCGGACCTA AAGGCCAACATGTGGATCAACCAGGCGGAACTGAATGGCAAACCGGGAATCGATGACGACGGGGATGGCGTGGTGGACGA TATCTACGGGTACAACGGCGTAAACAACAACGGCAACCCCATGGACAACAACGGTCACGGCACCCACGTGGCCGGCACTA TCGGGGCGGTCGGCAATAACGGCATCGGCGTGGCCGGGGTCAACTGGACAGTCAAGATCATGGCCTGCAAATTCCTGGAT GCAAACGGCTCCGGCTACACCTCCGATGCCATTGAGTGTCTACAGTACGTCAAGAAGATGAAATCCCGCGGGGTGAACAT CGTCGCCACCAATAACAGCTGGGGGGGCGGAGGCTATTCGCGGGCGCTCTACGACACCATCAACAGCCAGCGGGATATCC TCTTCATTACCGCCGCCGGCAACGCCGCTGCCAACAACGACACGACCCCGAGTTATCCCGCGGACTACAACCTGCCGAAC ATCATCGCTGTTGCCGCCACCACGTCGACGGACGGCTTAGCCTCGTTCTCCAATTACGGCCGCCGGACCGTCATGGTGGG AGCGCCCGGGTACTCCATTCTGAGCACCTATCCCAACAACCAGTACGCCTACCTCTCCGGCACCTCTATGGCGACCCCCC ACGTCACCGGCCTGGCCGCGCTCATCAAGGCCAAGTATCCGACCATGGACTGGCGGGGGATCAAAAACCTCATCCTTTCC GGCGGCGACCGCCCGTCGTCGCTGGCCGCCAAGACTGTCACCGGCCGGCGTATCGACGCCTTCGGCTCTCTCACCTGCGT CGACAGCCGCGTCTTCTCCGCTCTGACATATCCAGCCACCCTCCAGCCTGGTGTGGCAACGACGCTTTCCGCCCTGAGCA TCAACTGCTCAAAGCCTGCCGGACCTGTCACGGTCTCCCTCAGCACCGGTGGGGTCTTGACCATGCGCGATGACGGTGTC TACCCCGATCTGGCAGCAGGGGATGGGATATTCACCGGCTCGTGGACCCCCACCGGTACCGCCGAAACCCTCAACTTTTC ATCGCCCGTCGGTGCCGAGACAGTAACCGTCGGCAAGTAA
Upstream 100 bases:
>100_bases CGCCGAAATATCGCATCGATATTCCGACCCGGCTTTTTTTGTGCCGGACCGGACGAAAAAGCGGCTCCAGTAGCCGGGAC ACGTCGAAAGGGGAGGATGG
Downstream 100 bases:
>100_bases CCGGCATGAAGGTGGCGCCGCCCAACGGCGCCACCTTCCCAATGCAATCCTTTGCTCCGACGCTACCCTAGCGTACCCCC TCCCAGGTGATGTAGCTGAT
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MMKKRLERFVCSLFMVVLMAGYGNAGMMTASAAGTAPYKEGELIVKYREGVSEEGKAEGHRRHGSERKKEFRDLNMEQVK IRPGLGVENAVKEFEADDDVEYAEPNYLLKASKIPTDPKFYSTWGMAKINAPAAWDNTTGSAGVVVAVIDSGVDYNHPDL KANMWINQAELNGKPGIDDDGDGVVDDIYGYNGVNNNGNPMDNNGHGTHVAGTIGAVGNNGIGVAGVNWTVKIMACKFLD ANGSGYTSDAIECLQYVKKMKSRGVNIVATNNSWGGGGYSRALYDTINSQRDILFITAAGNAAANNDTTPSYPADYNLPN IIAVAATTSTDGLASFSNYGRRTVMVGAPGYSILSTYPNNQYAYLSGTSMATPHVTGLAALIKAKYPTMDWRGIKNLILS GGDRPSSLAAKTVTGRRIDAFGSLTCVDSRVFSALTYPATLQPGVATTLSALSINCSKPAGPVTVSLSTGGVLTMRDDGV YPDLAAGDGIFTGSWTPTGTAETLNFSSPVGAETVTVGK
Sequences:
>Translated_519_residues MMKKRLERFVCSLFMVVLMAGYGNAGMMTASAAGTAPYKEGELIVKYREGVSEEGKAEGHRRHGSERKKEFRDLNMEQVK IRPGLGVENAVKEFEADDDVEYAEPNYLLKASKIPTDPKFYSTWGMAKINAPAAWDNTTGSAGVVVAVIDSGVDYNHPDL KANMWINQAELNGKPGIDDDGDGVVDDIYGYNGVNNNGNPMDNNGHGTHVAGTIGAVGNNGIGVAGVNWTVKIMACKFLD ANGSGYTSDAIECLQYVKKMKSRGVNIVATNNSWGGGGYSRALYDTINSQRDILFITAAGNAAANNDTTPSYPADYNLPN IIAVAATTSTDGLASFSNYGRRTVMVGAPGYSILSTYPNNQYAYLSGTSMATPHVTGLAALIKAKYPTMDWRGIKNLILS GGDRPSSLAAKTVTGRRIDAFGSLTCVDSRVFSALTYPATLQPGVATTLSALSINCSKPAGPVTVSLSTGGVLTMRDDGV YPDLAAGDGIFTGSWTPTGTAETLNFSSPVGAETVTVGK >Mature_519_residues MMKKRLERFVCSLFMVVLMAGYGNAGMMTASAAGTAPYKEGELIVKYREGVSEEGKAEGHRRHGSERKKEFRDLNMEQVK IRPGLGVENAVKEFEADDDVEYAEPNYLLKASKIPTDPKFYSTWGMAKINAPAAWDNTTGSAGVVVAVIDSGVDYNHPDL KANMWINQAELNGKPGIDDDGDGVVDDIYGYNGVNNNGNPMDNNGHGTHVAGTIGAVGNNGIGVAGVNWTVKIMACKFLD ANGSGYTSDAIECLQYVKKMKSRGVNIVATNNSWGGGGYSRALYDTINSQRDILFITAAGNAAANNDTTPSYPADYNLPN IIAVAATTSTDGLASFSNYGRRTVMVGAPGYSILSTYPNNQYAYLSGTSMATPHVTGLAALIKAKYPTMDWRGIKNLILS GGDRPSSLAAKTVTGRRIDAFGSLTCVDSRVFSALTYPATLQPGVATTLSALSINCSKPAGPVTVSLSTGGVLTMRDDGV YPDLAAGDGIFTGSWTPTGTAETLNFSSPVGAETVTVGK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505579, Length=364, Percent_Identity=24.4505494505494, Blast_Score=77, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320775, Length=313, Percent_Identity=34.185303514377, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6324576, Length=327, Percent_Identity=30.8868501529052, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6319893, Length=194, Percent_Identity=35.5670103092784, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI281360987, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642494, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642490, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45555723, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642492, Length=330, Percent_Identity=26.0606060606061, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642488, Length=333, Percent_Identity=25.8258258258258, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24642484, Length=333, Percent_Identity=25.8258258258258, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24642486, Length=333, Percent_Identity=25.8258258258258, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 54835; Mature: 54835
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKRLERFVCSLFMVVLMAGYGNAGMMTASAAGTAPYKEGELIVKYREGVSEEGKAEGH CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHH RRHGSERKKEFRDLNMEQVKIRPGLGVENAVKEFEADDDVEYAEPNYLLKASKIPTDPKF HHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE YSTWGMAKINAPAAWDNTTGSAGVVVAVIDSGVDYNHPDLKANMWINQAELNGKPGIDDD EECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEHCCCCCCCCCCC GDGVVDDIYGYNGVNNNGNPMDNNGHGTHVAGTIGAVGNNGIGVAGVNWTVKIMACKFLD CCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEEEEEEEE ANGSGYTSDAIECLQYVKKMKSRGVNIVATNNSWGGGGYSRALYDTINSQRDILFITAAG CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECC NAAANNDTTPSYPADYNLPNIIAVAATTSTDGLASFSNYGRRTVMVGAPGYSILSTYPNN CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEECCCCCEEEECCCC QYAYLSGTSMATPHVTGLAALIKAKYPTMDWRGIKNLILSGGDRPSSLAAKTVTGRRIDA EEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEC FGSLTCVDSRVFSALTYPATLQPGVATTLSALSINCSKPAGPVTVSLSTGGVLTMRDDGV CCCEEEEHHHHHHHHCCCCCCCCCHHHEEHEEEEECCCCCCCEEEEEECCCEEEEECCCC YPDLAAGDGIFTGSWTPTGTAETLNFSSPVGAETVTVGK CCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCC >Mature Secondary Structure MMKKRLERFVCSLFMVVLMAGYGNAGMMTASAAGTAPYKEGELIVKYREGVSEEGKAEGH CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHH RRHGSERKKEFRDLNMEQVKIRPGLGVENAVKEFEADDDVEYAEPNYLLKASKIPTDPKF HHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE YSTWGMAKINAPAAWDNTTGSAGVVVAVIDSGVDYNHPDLKANMWINQAELNGKPGIDDD EECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEHCCCCCCCCCCC GDGVVDDIYGYNGVNNNGNPMDNNGHGTHVAGTIGAVGNNGIGVAGVNWTVKIMACKFLD CCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEEEEEEEE ANGSGYTSDAIECLQYVKKMKSRGVNIVATNNSWGGGGYSRALYDTINSQRDILFITAAG CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECC NAAANNDTTPSYPADYNLPNIIAVAATTSTDGLASFSNYGRRTVMVGAPGYSILSTYPNN CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEECCCCCEEEECCCC QYAYLSGTSMATPHVTGLAALIKAKYPTMDWRGIKNLILSGGDRPSSLAAKTVTGRRIDA EEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEC FGSLTCVDSRVFSALTYPATLQPGVATTLSALSINCSKPAGPVTVSLSTGGVLTMRDDGV CCCEEEEHHHHHHHHCCCCCCCCCHHHEEHEEEEECCCCCCCEEEEEECCCEEEEECCCC YPDLAAGDGIFTGSWTPTGTAETLNFSSPVGAETVTVGK CCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]