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The map label for this gene is 78222373

Identifier: 78222373

GI number: 78222373

Start: 1283626

End: 1284204

Strand: Direct

Name: 78222373

Synonym: Gmet_1157

Alternate gene names: NA

Gene position: 1283626-1284204 (Clockwise)

Preceding gene: 78222370

Following gene: 78222374

Centisome position: 32.11

GC content: 59.41

Gene sequence:

>579_bases
GTGGATACCGCCGTTCTGATGACCACCTTCGGCGTCATTTTTCTCGCCGAACTCGGTGACAAGACCCAGCTCACCGCCAT
GGCACTCGCCATCCGCTACCCCTGGAAAAAAGTCTTCGTGGGCATTGCCGCAGCCTTTGCCCTCCTGAACGTGGGGGCGG
TCCTCGTTGGCAAGATTCTGTTCGCGGTCCTTCCGCTGTTTTGGATAAAGTTTATGTCGGGGGGGCTCTTCCTTTTTTTC
GGAGTCACCACCCTGCGGGGAGGGGAGGACGCTGACGAGGAGGAAGGGAAGAAGGCGTCTGCCCGGGGGCCGGTGGTCAC
GTCGTTCGTGATGATTCTCCTGGCCGAGCTCGGGGACAAGACCCAACTCGTCACCACGAGCCTGGCTGCCCAGTACGACT
CTCCTCTGGCGGTCTTCACGGGGTCCACCCTGGCCCTGTGGCTTGTCTCTCTTATCGGCATCTTCCTGGGACGACAGCTT
ATCCGAGTCGTATCGCTTTATACCATCCAGAAGGCGGCAGGAGTCCTCTTCCTTGTCTTCGGCGTCATTGTCCTCTATCA
GGCCTTTTCCGGCCGTTGA

Upstream 100 bases:

>100_bases
CACGCCTGTCCTTGCTTTTGAAGAGGGAATCCTATAGCATCCACCGTTCATGGGCGATTTGATCCCATGACGTGCCATTC
GTCATTACCCAGGAGGATCC

Downstream 100 bases:

>100_bases
CCGATTGCTTTTTCGGCATCGCATCCGTACAATGGTTGCCGGATACCTATCCTGGCAGAGAGCCTGATGCCTGATAAATA
CGTCGAAAAATCCTTTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDTAVLMTTFGVIFLAELGDKTQLTAMALAIRYPWKKVFVGIAAAFALLNVGAVLVGKILFAVLPLFWIKFMSGGLFLFF
GVTTLRGGEDADEEEGKKASARGPVVTSFVMILLAELGDKTQLVTTSLAAQYDSPLAVFTGSTLALWLVSLIGIFLGRQL
IRVVSLYTIQKAAGVLFLVFGVIVLYQAFSGR

Sequences:

>Translated_192_residues
MDTAVLMTTFGVIFLAELGDKTQLTAMALAIRYPWKKVFVGIAAAFALLNVGAVLVGKILFAVLPLFWIKFMSGGLFLFF
GVTTLRGGEDADEEEGKKASARGPVVTSFVMILLAELGDKTQLVTTSLAAQYDSPLAVFTGSTLALWLVSLIGIFLGRQL
IRVVSLYTIQKAAGVLFLVFGVIVLYQAFSGR
>Mature_192_residues
MDTAVLMTTFGVIFLAELGDKTQLTAMALAIRYPWKKVFVGIAAAFALLNVGAVLVGKILFAVLPLFWIKFMSGGLFLFF
GVTTLRGGEDADEEEGKKASARGPVVTSFVMILLAELGDKTQLVTTSLAAQYDSPLAVFTGSTLALWLVSLIGIFLGRQL
IRVVSLYTIQKAAGVLFLVFGVIVLYQAFSGR

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

Organism=Drosophila melanogaster, GI281361794, Length=215, Percent_Identity=28.8372093023256, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24647003, Length=215, Percent_Identity=28.8372093023256, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357589, Length=215, Percent_Identity=28.8372093023256, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 20636; Mature: 20636

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAVLMTTFGVIFLAELGDKTQLTAMALAIRYPWKKVFVGIAAAFALLNVGAVLVGKIL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVLPLFWIKFMSGGLFLFFGVTTLRGGEDADEEEGKKASARGPVVTSFVMILLAELGDK
HHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCC
TQLVTTSLAAQYDSPLAVFTGSTLALWLVSLIGIFLGRQLIRVVSLYTIQKAAGVLFLVF
HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIVLYQAFSGR
HHHHHHHHHCCC
>Mature Secondary Structure
MDTAVLMTTFGVIFLAELGDKTQLTAMALAIRYPWKKVFVGIAAAFALLNVGAVLVGKIL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVLPLFWIKFMSGGLFLFFGVTTLRGGEDADEEEGKKASARGPVVTSFVMILLAELGDK
HHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCC
TQLVTTSLAAQYDSPLAVFTGSTLALWLVSLIGIFLGRQLIRVVSLYTIQKAAGVLFLVF
HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVIVLYQAFSGR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]