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The map label for this gene is 78222374

Identifier: 78222374

GI number: 78222374

Start: 1284271

End: 1285164

Strand: Direct

Name: 78222374

Synonym: Gmet_1158

Alternate gene names: NA

Gene position: 1284271-1285164 (Clockwise)

Preceding gene: 78222373

Following gene: 78222384

Centisome position: 32.13

GC content: 61.41

Gene sequence:

>894_bases
ATGCCTGATAAATACGTCGAAAAATCCTTTCTCTATCTCGTAGCCCTCTCACTCCTACTTCACGTGGGTCTGTTCGCTCT
GATCATTCTGTATCCCCAGGCAAAGCCGGTGCTGCGCCAGGAGCCGATCATGATCGATTTGGAGGATATTCCCGATCTGC
GTCAGGCACCGATGCCGACCGATTCGCGGAGGGAAGTGCGCCGTCAGGCCGAGCAACCCCGGCGGGTGCCGCGGGAAATG
GCGCCGCGGGGAGACCGGGAACGGGACCGTATCGCCTCGCTGCCTCCCGTTGCGAAACCAATACCGTCACGGCCTGCAGT
TCCCTATCAGGCCGCGCCGCAGCCCCGTCGGGGCGAGGGAGTGGGGCCGTCGGCCACAAACGGCAGGACAGGGGAGATTC
CGGTGCGGGAGGCCCCCCGAGGCGGGGGCATTCTCAAACCACGCGCGTCGGCGGAAGCGCCTGAACTGGCCCAGCTCATG
CCGAGCGCCCAGAGACTTGCGAAGATCGAGGAAAGTTACCGGAAGAAGTACCGGGATGATGTGGCGGACGGGGATACGAA
GTTTCTCGATACCGACGATATTCAGTTCGGCTCGTTCCTGCGCCGGTTCGAGAACGCAATCTACGGGGTATGGCGTTATC
CCCAGGAAGCGGCCCGGCTCGGCATTGAGGGAGTTACGCCTGTAAAAATCACCTTCAACAGGAGTGGTGTCATCGTAAAG
TATGAAATTCTGCAGAGTTCGGGGAGCAGAATCCTGGATGACGAGGTGCTGCGGACCCTGCGCATGGTGGGACCGGTCGG
CCCCTTTCCCAGGGGGTACGACCGGGACGAGTTCCACCTCATCGCCTTTTTCCAGTACGGCATCGTTCGGGGAGCGAGCA
GATCCCTCCGCTGA

Upstream 100 bases:

>100_bases
CATTGTCCTCTATCAGGCCTTTTCCGGCCGTTGACCGATTGCTTTTTCGGCATCGCATCCGTACAATGGTTGCCGGATAC
CTATCCTGGCAGAGAGCCTG

Downstream 100 bases:

>100_bases
CCGGCCTCAATCCTGCCTTCTGCACAGTCGTTCCCGCAGATACTCCTCAAATTCCGTATTGAACTCTTCCCGCTTGAGCG
CCATGTCAACCGTGGCCTTC

Product: TonB-like

Products: NA

Alternate protein names: NB-Like Protein; NB-Like; NB-Dependent Receptor; Periplasmic Protein nB

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MPDKYVEKSFLYLVALSLLLHVGLFALIILYPQAKPVLRQEPIMIDLEDIPDLRQAPMPTDSRREVRRQAEQPRRVPREM
APRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEGVGPSATNGRTGEIPVREAPRGGGILKPRASAEAPELAQLM
PSAQRLAKIEESYRKKYRDDVADGDTKFLDTDDIQFGSFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVK
YEILQSSGSRILDDEVLRTLRMVGPVGPFPRGYDRDEFHLIAFFQYGIVRGASRSLR

Sequences:

>Translated_297_residues
MPDKYVEKSFLYLVALSLLLHVGLFALIILYPQAKPVLRQEPIMIDLEDIPDLRQAPMPTDSRREVRRQAEQPRRVPREM
APRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEGVGPSATNGRTGEIPVREAPRGGGILKPRASAEAPELAQLM
PSAQRLAKIEESYRKKYRDDVADGDTKFLDTDDIQFGSFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVK
YEILQSSGSRILDDEVLRTLRMVGPVGPFPRGYDRDEFHLIAFFQYGIVRGASRSLR
>Mature_296_residues
PDKYVEKSFLYLVALSLLLHVGLFALIILYPQAKPVLRQEPIMIDLEDIPDLRQAPMPTDSRREVRRQAEQPRRVPREMA
PRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEGVGPSATNGRTGEIPVREAPRGGGILKPRASAEAPELAQLMP
SAQRLAKIEESYRKKYRDDVADGDTKFLDTDDIQFGSFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVKY
EILQSSGSRILDDEVLRTLRMVGPVGPFPRGYDRDEFHLIAFFQYGIVRGASRSLR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33500; Mature: 33369

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKYVEKSFLYLVALSLLLHVGLFALIILYPQAKPVLRQEPIMIDLEDIPDLRQAPMPT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEECCCCCCHHHCCCCC
DSRREVRRQAEQPRRVPREMAPRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEG
CHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VGPSATNGRTGEIPVREAPRGGGILKPRASAEAPELAQLMPSAQRLAKIEESYRKKYRDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADGDTKFLDTDDIQFGSFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCEEEE
YEILQSSGSRILDDEVLRTLRMVGPVGPFPRGYDRDEFHLIAFFQYGIVRGASRSLR
EHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
PDKYVEKSFLYLVALSLLLHVGLFALIILYPQAKPVLRQEPIMIDLEDIPDLRQAPMPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEECCCCCCHHHCCCCC
DSRREVRRQAEQPRRVPREMAPRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEG
CHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VGPSATNGRTGEIPVREAPRGGGILKPRASAEAPELAQLMPSAQRLAKIEESYRKKYRDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADGDTKFLDTDDIQFGSFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCEEEE
YEILQSSGSRILDDEVLRTLRMVGPVGPFPRGYDRDEFHLIAFFQYGIVRGASRSLR
EHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA