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The map label for this gene is ydiK [C]

Identifier: 78222370

GI number: 78222370

Start: 1280246

End: 1281322

Strand: Direct

Name: ydiK [C]

Synonym: Gmet_1154

Alternate gene names: 78222370

Gene position: 1280246-1281322 (Clockwise)

Preceding gene: 78222369

Following gene: 78222373

Centisome position: 32.03

GC content: 59.33

Gene sequence:

>1077_bases
ATGGATAGAGGACACTTCTACGCGCTGGTGGCATTTTCCTTTTGTGCGATTCTCGGTTACGTGGTCTATGCCATTGTGTC
ACCGTTTCTGAACTCCCTCGGCTGGGCTGCCGTGATCGGCATACTTACCTTCCCCATTTATCGTCGACTGCGTGCGGGGC
TCGGCGCACGGGACACGCTTGCCGCTGGACTCATGACTCCTGCCACGGTTCTCACTCTCGTCGTACCCTTTGTGGGGCTT
ACCTTTTTTCTCGTTCAGGAGGCAGCCGTCGCCTACGGTTTCCTCGAAAAGATTGCCGCCGATGGGGGCGAATCCCTGGT
GATGAGCATCCAGAATCATCCCGTTGTCAAGCCGTGGATCGCGCGCATCGAGGCTTACACCGGCCCACTCGGCTTTGAGA
TCGACACCCGGTTCCTCCCCGAAATGAAGGAAGTGGCGGCAAGGGTGCTCAACTACTCCAAGGAGATCGTCAAGAACGTC
TTTATCTTCAGCATCAAGCTGCTCCTGATGGTGATTACCCTCTTTTTCATCTACCGTGACGGCGAGCGGGTCCAGCGCCA
TGCCCTTGCCGTCATCCCCCTCACGGAAGCCAACAAGCAGATCCTCACCGATACGGTTCGCCGCGTTCTGAAGGCGGTCA
TGTATGGCGTCTTTCTCACCTGCCTCGTTCAGGGTGCTCTCGGCGGCATCGGGTTTTGGGCGGCGGGGCTCCCTTCGCCG
CTTCTTTTCGGGGCCATCATGGCGGTCTGCGCCCTCATTCCGGTGGTGGGGACGGGGCTCATCTGGCTTCCCGCCGCCAT
CTACCTCCTGGCAAACGGCGAGGTCGTGAAGGGAATCGGGCTCATTATCTGGGGATTCGTTGCGGTGAGTTCCATCGACA
ACGTGATCAGGCCCTTCTTCATCAGCGGCAGGGCAAAGCTGCCAGTCCTGGTCATTGCCATCGGCGGCCTCGGCGGATTG
GCCTCTTTCGGGCTTCTGGGCGCGGTGGCTGGCCCCATCGTGCTGGCGCTTTTCCTGGCACTGTTCGAGATGTATCGGGA
TGAGGTGGAAACGGGGGAGGGTAGGGGCAATTCATGA

Upstream 100 bases:

>100_bases
AGGTGAAAAAGACCGCCGTTGTCAAGGTCCGGATCGTGGAAACGGTACCGTCGGATTCAGGTCACGAAGAAGACGGGGAT
GTGAAGGTCTGAGGTCAAGG

Downstream 100 bases:

>100_bases
ATTGCCCCTACGGTATGGACGCCTTCCGGTGAAGTGTCGATATCAGGCCCGATGCGCCGCTTTGGCCCGGCGGTTGCCGA
TGGTGACCGAGATGAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MDRGHFYALVAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPATVLTLVVPFVGL
TFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARIEAYTGPLGFEIDTRFLPEMKEVAARVLNYSKEIVKNV
FIFSIKLLLMVITLFFIYRDGERVQRHALAVIPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSP
LLFGAIMAVCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLPVLVIAIGGLGGL
ASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS

Sequences:

>Translated_358_residues
MDRGHFYALVAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPATVLTLVVPFVGL
TFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARIEAYTGPLGFEIDTRFLPEMKEVAARVLNYSKEIVKNV
FIFSIKLLLMVITLFFIYRDGERVQRHALAVIPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSP
LLFGAIMAVCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLPVLVIAIGGLGGL
ASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS
>Mature_358_residues
MDRGHFYALVAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPATVLTLVVPFVGL
TFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARIEAYTGPLGFEIDTRFLPEMKEVAARVLNYSKEIVKNV
FIFSIKLLLMVITLFFIYRDGERVQRHALAVIPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSP
LLFGAIMAVCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLPVLVIAIGGLGGL
ASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=350, Percent_Identity=29.4285714285714, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38485; Mature: 38485

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRGHFYALVAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AAGLMTPATVLTLVVPFVGLTFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHH
ARIEAYTGPLGFEIDTRFLPEMKEVAARVLNYSKEIVKNVFIFSIKLLLMVITLFFIYRD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GERVQRHALAVIPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSP
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLFGAIMAVCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGRAKLPVLVIAIGGLGGLASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDRGHFYALVAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AAGLMTPATVLTLVVPFVGLTFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHH
ARIEAYTGPLGFEIDTRFLPEMKEVAARVLNYSKEIVKNVFIFSIKLLLMVITLFFIYRD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GERVQRHALAVIPLTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSP
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLFGAIMAVCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGRAKLPVLVIAIGGLGGLASFGLLGAVAGPIVLALFLALFEMYRDEVETGEGRGNS
HCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]