| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188510
Identifier: 78188510
GI number: 78188510
Start: 634330
End: 635193
Strand: Reverse
Name: 78188510
Synonym: Cag_0532
Alternate gene names: NA
Gene position: 635193-634330 (Counterclockwise)
Preceding gene: 78188511
Following gene: 78188509
Centisome position: 24.7
GC content: 33.33
Gene sequence:
>864_bases ATGCATCCAGAAACTGCACAGATCGTACATGCTATTGAAAGCCTAAAGCAAGCTCCAAATTTTATTAAAGATTACATTTT TCCTATTGCTAACGCTTTTTTCACCTCTTTACTTGGTGCAGGAATAGCGTATTTCACGCTACGGTACCAAGAAGTGATTC AAATAGAAAAAGACAAAATGGATACAGTTAACAAATGGACTTTACTTGTTGATGAAGCAAGATCGTCTTTATTAGCCATC AAATCAAATTACCATGGAAACTTGACTGATTCTCCTATACAGCGGGCACTTGCTATACGAACTGTTTTATTTACGGCCAC ACCAATTAATGAAGAATATTTGCATTTATTTTTTCTAATACCTAAGGCTACAGAAAAAAAGTGTGAATATCAAAAGTGGA GCCAGATTTCTATAATTAGAACAATGGTGCTCAATTACAATAATTTGCTTAAGCTATGGATTAAGCGTAATGAAGTTGAA AGACCGATCAAAGAGAAGTTGCTACAAAAATATTCACAAAATGCTTATGCCGATGTGAACACAGACCAAATAATAGAATG TATTGGTGCAGCAAACTTCGCGAGTTTAGTTGATCTAACAGAACATGTAATTAAACTCACAGATGACTTACTTGTTGAAT TTGATAATTTTTTGCACGAGTTTCCAAACTACGCTAAAACTCTAATAAACACAAAAAGGTTAAAACGATACGGATCAATC TTAACTTATTCTAACAACAGCAATAAAAAACTACTTTCAATGCTTGAAAAATCTCCCACATCTAATTACGAATCGGTTAT AAAGTTATTCGGAATGACAGTAGAACAATTACGCGAAAAGTATAAAACTGGATATGAGCTTTAA
Upstream 100 bases:
>100_bases AAATAATTAATTGGCTGATCTGTAGATATGGTTAGAATGTGGTTTTATAAAGGAAGAAGCAGATCAGCCTAAACATTGTT AAAGCTCGAAGAGGATATTC
Downstream 100 bases:
>100_bases AATCAAGCGACACAAAACCCCGTAAGTATCTTTGCTTTTCGCATAAATCACGACAGAGCTTGCGATCAGCCTGTTATGTA TAAACCATTGCTCAAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MHPETAQIVHAIESLKQAPNFIKDYIFPIANAFFTSLLGAGIAYFTLRYQEVIQIEKDKMDTVNKWTLLVDEARSSLLAI KSNYHGNLTDSPIQRALAIRTVLFTATPINEEYLHLFFLIPKATEKKCEYQKWSQISIIRTMVLNYNNLLKLWIKRNEVE RPIKEKLLQKYSQNAYADVNTDQIIECIGAANFASLVDLTEHVIKLTDDLLVEFDNFLHEFPNYAKTLINTKRLKRYGSI LTYSNNSNKKLLSMLEKSPTSNYESVIKLFGMTVEQLREKYKTGYEL
Sequences:
>Translated_287_residues MHPETAQIVHAIESLKQAPNFIKDYIFPIANAFFTSLLGAGIAYFTLRYQEVIQIEKDKMDTVNKWTLLVDEARSSLLAI KSNYHGNLTDSPIQRALAIRTVLFTATPINEEYLHLFFLIPKATEKKCEYQKWSQISIIRTMVLNYNNLLKLWIKRNEVE RPIKEKLLQKYSQNAYADVNTDQIIECIGAANFASLVDLTEHVIKLTDDLLVEFDNFLHEFPNYAKTLINTKRLKRYGSI LTYSNNSNKKLLSMLEKSPTSNYESVIKLFGMTVEQLREKYKTGYEL >Mature_287_residues MHPETAQIVHAIESLKQAPNFIKDYIFPIANAFFTSLLGAGIAYFTLRYQEVIQIEKDKMDTVNKWTLLVDEARSSLLAI KSNYHGNLTDSPIQRALAIRTVLFTATPINEEYLHLFFLIPKATEKKCEYQKWSQISIIRTMVLNYNNLLKLWIKRNEVE RPIKEKLLQKYSQNAYADVNTDQIIECIGAANFASLVDLTEHVIKLTDDLLVEFDNFLHEFPNYAKTLINTKRLKRYGSI LTYSNNSNKKLLSMLEKSPTSNYESVIKLFGMTVEQLREKYKTGYEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33263; Mature: 33263
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPETAQIVHAIESLKQAPNFIKDYIFPIANAFFTSLLGAGIAYFTLRYQEVIQIEKDKM CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVNKWTLLVDEARSSLLAIKSNYHGNLTDSPIQRALAIRTVLFTATPINEEYLHLFFLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEHEEEE PKATEKKCEYQKWSQISIIRTMVLNYNNLLKLWIKRNEVERPIKEKLLQKYSQNAYADVN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC TDQIIECIGAANFASLVDLTEHVIKLTDDLLVEFDNFLHEFPNYAKTLINTKRLKRYGSI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LTYSNNSNKKLLSMLEKSPTSNYESVIKLFGMTVEQLREKYKTGYEL EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHPETAQIVHAIESLKQAPNFIKDYIFPIANAFFTSLLGAGIAYFTLRYQEVIQIEKDKM CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVNKWTLLVDEARSSLLAIKSNYHGNLTDSPIQRALAIRTVLFTATPINEEYLHLFFLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEHEEEE PKATEKKCEYQKWSQISIIRTMVLNYNNLLKLWIKRNEVERPIKEKLLQKYSQNAYADVN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC TDQIIECIGAANFASLVDLTEHVIKLTDDLLVEFDNFLHEFPNYAKTLINTKRLKRYGSI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LTYSNNSNKKLLSMLEKSPTSNYESVIKLFGMTVEQLREKYKTGYEL EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA