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The map label for this gene is 78188509

Identifier: 78188509

GI number: 78188509

Start: 633534

End: 633821

Strand: Reverse

Name: 78188509

Synonym: Cag_0531

Alternate gene names: NA

Gene position: 633821-633534 (Counterclockwise)

Preceding gene: 78188510

Following gene: 78188508

Centisome position: 24.64

GC content: 47.57

Gene sequence:

>288_bases
ATGTGTCTTGCTATTCCGGGAAAACTTATTGAACGCATTGAGGCTCATGGGGAGCATGGGCTTGCTATGGGCGTTATTGA
TATAAATGGTGCTGCCGTGCGTGCGTGCCTTGCCTATGTGCCCGATATTGCAGTTGGGCAATACACCATTGTTCATGCTG
GATTTGCCTTAAAAATTCTTGATGAAGAGGAGGCGATGGAGAGCTTGAAACTGTGGCAGGAGTTAAGCGACAAGGGGGCT
TTTCAGCCACTTGATGATGCCAATTCATCAACGCAATCATGCTTGTAG

Upstream 100 bases:

>100_bases
AGCGTATCAGTTTATGATGAGTATCTCGTTAAACCCAGACTTTTTCATTTTTCTCCATACAACCTTACTGAACCCAACAT
ATCAATTAAATCAACACCTT

Downstream 100 bases:

>100_bases
CCAATGAAATATATTGATGAATATCGTGATCCAGCGCTTGCACAAACGTTGCTTGAGGAGATTAAGCGAACGGTAACACG
CCATTGGACAATTATGGAAA

Product: hydrogenase expression/formation protein HupF/HypC

Products: NA

Alternate protein names: Hydrogenase Expression/Formation Protein; Hydrogenase Expression/Formation Protein HypC; [NiFe] Hydrogenase Expression/Formation Protein

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MCLAIPGKLIERIEAHGEHGLAMGVIDINGAAVRACLAYVPDIAVGQYTIVHAGFALKILDEEEAMESLKLWQELSDKGA
FQPLDDANSSTQSCL

Sequences:

>Translated_95_residues
MCLAIPGKLIERIEAHGEHGLAMGVIDINGAAVRACLAYVPDIAVGQYTIVHAGFALKILDEEEAMESLKLWQELSDKGA
FQPLDDANSSTQSCL
>Mature_95_residues
MCLAIPGKLIERIEAHGEHGLAMGVIDINGAAVRACLAYVPDIAVGQYTIVHAGFALKILDEEEAMESLKLWQELSDKGA
FQPLDDANSSTQSCL

Specific function: Unknown

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10184; Mature: 10184

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAIPGKLIERIEAHGEHGLAMGVIDINGAAVRACLAYVPDIAVGQYTIVHAGFALKIL
CEEECCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEE
DEEEAMESLKLWQELSDKGAFQPLDDANSSTQSCL
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCLAIPGKLIERIEAHGEHGLAMGVIDINGAAVRACLAYVPDIAVGQYTIVHAGFALKIL
CEEECCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEE
DEEEAMESLKLWQELSDKGAFQPLDDANSSTQSCL
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA