Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78188402

Identifier: 78188402

GI number: 78188402

Start: 498781

End: 500004

Strand: Reverse

Name: 78188402

Synonym: Cag_0424

Alternate gene names: NA

Gene position: 500004-498781 (Counterclockwise)

Preceding gene: 78188408

Following gene: 78188401

Centisome position: 19.44

GC content: 50.74

Gene sequence:

>1224_bases
ATGGCGCTTGCATCTTCCCCCATTGTGTCGTTTACCTTTCTTCGGCTCCTTTCGTTTCGCTTTCTTATTGTGCTTTCGTA
CCAAATGCTGGCTATTGTGGCGGGTTGGCATATTTATGAGCTAACGCATAATGCGTTGGCATTGGGCTTTATTGGCTTGG
CGGAGGTGATTCCCTACTTTGCATCGGCGTTGTTTGCGGGTCATGCGGTTGACCACTATTCGCGGCGCTTGTTTGGCGTT
ATGGCAAGTGTTATGGTGATGGCGAGTGCGTTGATGTTAACGGCTGTTTCGGCTGGTATGGTTGTGGGCAATCCTGTGTG
GTGGCTTTATGGTGCTATTGCGTTTAATGGTTTAGCGCGGGCGTTTATTAGCCCATCGTATAGCGCCATGTTTGCGTTGG
TGCTACCGCGTGAGGCGTATGCAAAAGCCTCGGGAATTGGGAGTTCGGTCTTTCAGCTTGGCTTGGTAACGGGTCCAGCG
TTGGGTGGGCTGCTTGCGGGTTGGTTTGGCAACACGGCGGGATACGCTGTTGCGGCGGTGTTGGCGTTTGGTGCGGCATT
GGCGCTTTTTTCGGTACGAGTAAAGGAGCCGCCTTCTGCCGAGAGTATGCCAATTTTTGCAAGTATTGCAAGTGGTATTC
GATTTGTGTTTGGTAATCAAATTATTCTTGGTGCTCAGTCGCTTGATATGTTTGCGGTGCTTTTTGGTGGAGCGGTAGCG
TTACTGCCTGCTTTTATTAAAGATGTATTTCACTTTGGTCCCGAAGCTTTTGGGTTGTTGCGTGCCATGCCTGCAATTGG
AGCGGTAATAACGGGGCTTTATTTGGCACGTCATCCGCTTAATCACCATGCGGGGCGTTGGTTGCTTGGCGCGGTTGCGG
GTTTTGGGGTATGTATTATTGGTTTTGCACTTTCAACCACTATTTGGATGGCGGGGTTGTTGCTGTTGCTTTCGGGCATT
TGCGATGGCGTGTCGGTAGTAATGCGCACGGCTATTATGCAGTTGTTAACGCCCGATGATATGCGTGGGCGTGTAGCGGC
GATTAATGGAATTTTTATTGGTTCGTCCAATGAGCTGGGGGCTTTTGAGTCGGGTGTGGCGGCGCATGTGATGGGGTTAG
TGCCATCGGTGATTTTTGGCGGTTTCATGACGCTTGGTGTCGTGGCTGTAACGGCTAAATTAGCGCCGAAGCTAAGGCGG
TTGGATTTGCAACAGTTGTATTAG

Upstream 100 bases:

>100_bases
TGTATATTTGCCGCGCTCATAACTGCAGTATGGTGCCACTCAACCCATCGGCTGCACGCTTTAGCATTTCACCCCAATTG
CTTGATTTCAATCCATTTCT

Downstream 100 bases:

>100_bases
AACATCACTAAAAATCTATTGCGCGCCTTGATAGCGGCGTTGGGCGGTGCTCGAAATCCTCATGTATCATATATACACTG
CGGTTTTTGCGCTCCGTCCG

Product: drug:proton antiporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; DrugProton Antiporter; Facilitator Superfamily Transporter; MFS Permease; Membrane Transporter; Transmembrane Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family; Siderophore Export Protein; MFS Family Transporter; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Facilitator Superfamily Multidrug Resistance Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGV
MASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPA
LGGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA
LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGI
CDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRR
LDLQQLY

Sequences:

>Translated_407_residues
MALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGV
MASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPA
LGGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA
LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGI
CDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRR
LDLQQLY
>Mature_406_residues
ALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGVM
ASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPAL
GGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVAL
LPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGIC
DGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRRL
DLQQLY

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42742; Mature: 42611

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA