| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188402
Identifier: 78188402
GI number: 78188402
Start: 498781
End: 500004
Strand: Reverse
Name: 78188402
Synonym: Cag_0424
Alternate gene names: NA
Gene position: 500004-498781 (Counterclockwise)
Preceding gene: 78188408
Following gene: 78188401
Centisome position: 19.44
GC content: 50.74
Gene sequence:
>1224_bases ATGGCGCTTGCATCTTCCCCCATTGTGTCGTTTACCTTTCTTCGGCTCCTTTCGTTTCGCTTTCTTATTGTGCTTTCGTA CCAAATGCTGGCTATTGTGGCGGGTTGGCATATTTATGAGCTAACGCATAATGCGTTGGCATTGGGCTTTATTGGCTTGG CGGAGGTGATTCCCTACTTTGCATCGGCGTTGTTTGCGGGTCATGCGGTTGACCACTATTCGCGGCGCTTGTTTGGCGTT ATGGCAAGTGTTATGGTGATGGCGAGTGCGTTGATGTTAACGGCTGTTTCGGCTGGTATGGTTGTGGGCAATCCTGTGTG GTGGCTTTATGGTGCTATTGCGTTTAATGGTTTAGCGCGGGCGTTTATTAGCCCATCGTATAGCGCCATGTTTGCGTTGG TGCTACCGCGTGAGGCGTATGCAAAAGCCTCGGGAATTGGGAGTTCGGTCTTTCAGCTTGGCTTGGTAACGGGTCCAGCG TTGGGTGGGCTGCTTGCGGGTTGGTTTGGCAACACGGCGGGATACGCTGTTGCGGCGGTGTTGGCGTTTGGTGCGGCATT GGCGCTTTTTTCGGTACGAGTAAAGGAGCCGCCTTCTGCCGAGAGTATGCCAATTTTTGCAAGTATTGCAAGTGGTATTC GATTTGTGTTTGGTAATCAAATTATTCTTGGTGCTCAGTCGCTTGATATGTTTGCGGTGCTTTTTGGTGGAGCGGTAGCG TTACTGCCTGCTTTTATTAAAGATGTATTTCACTTTGGTCCCGAAGCTTTTGGGTTGTTGCGTGCCATGCCTGCAATTGG AGCGGTAATAACGGGGCTTTATTTGGCACGTCATCCGCTTAATCACCATGCGGGGCGTTGGTTGCTTGGCGCGGTTGCGG GTTTTGGGGTATGTATTATTGGTTTTGCACTTTCAACCACTATTTGGATGGCGGGGTTGTTGCTGTTGCTTTCGGGCATT TGCGATGGCGTGTCGGTAGTAATGCGCACGGCTATTATGCAGTTGTTAACGCCCGATGATATGCGTGGGCGTGTAGCGGC GATTAATGGAATTTTTATTGGTTCGTCCAATGAGCTGGGGGCTTTTGAGTCGGGTGTGGCGGCGCATGTGATGGGGTTAG TGCCATCGGTGATTTTTGGCGGTTTCATGACGCTTGGTGTCGTGGCTGTAACGGCTAAATTAGCGCCGAAGCTAAGGCGG TTGGATTTGCAACAGTTGTATTAG
Upstream 100 bases:
>100_bases TGTATATTTGCCGCGCTCATAACTGCAGTATGGTGCCACTCAACCCATCGGCTGCACGCTTTAGCATTTCACCCCAATTG CTTGATTTCAATCCATTTCT
Downstream 100 bases:
>100_bases AACATCACTAAAAATCTATTGCGCGCCTTGATAGCGGCGTTGGGCGGTGCTCGAAATCCTCATGTATCATATATACACTG CGGTTTTTGCGCTCCGTCCG
Product: drug:proton antiporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; DrugProton Antiporter; Facilitator Superfamily Transporter; MFS Permease; Membrane Transporter; Transmembrane Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family; Siderophore Export Protein; MFS Family Transporter; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Integral Membrane Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Facilitator Superfamily Multidrug Resistance Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily; Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGV MASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPA LGGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGI CDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRR LDLQQLY
Sequences:
>Translated_407_residues MALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGV MASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPA LGGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGI CDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRR LDLQQLY >Mature_406_residues ALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYFASALFAGHAVDHYSRRLFGVM ASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLARAFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPAL GGLLAGWFGNTAGYAVAAVLAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVAL LPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCIIGFALSTTIWMAGLLLLLSGIC DGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELGAFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRRL DLQQLY
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42742; Mature: 42611
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASALFAGHAVDHYSRRLFGVMASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPALGGLLAGWFGNTAGYAVAAV HHHCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH LAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCHHH LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCII HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GFALSTTIWMAGLLLLLSGICDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCC AFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRRLDLQQLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALASSPIVSFTFLRLLSFRFLIVLSYQMLAIVAGWHIYELTHNALALGFIGLAEVIPYF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASALFAGHAVDHYSRRLFGVMASVMVMASALMLTAVSAGMVVGNPVWWLYGAIAFNGLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AFISPSYSAMFALVLPREAYAKASGIGSSVFQLGLVTGPALGGLLAGWFGNTAGYAVAAV HHHCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH LAFGAALALFSVRVKEPPSAESMPIFASIASGIRFVFGNQIILGAQSLDMFAVLFGGAVA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCHHH LLPAFIKDVFHFGPEAFGLLRAMPAIGAVITGLYLARHPLNHHAGRWLLGAVAGFGVCII HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GFALSTTIWMAGLLLLLSGICDGVSVVMRTAIMQLLTPDDMRGRVAAINGIFIGSSNELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCC AFESGVAAHVMGLVPSVIFGGFMTLGVVAVTAKLAPKLRRLDLQQLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA