| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188408
Identifier: 78188408
GI number: 78188408
Start: 502684
End: 503802
Strand: Reverse
Name: 78188408
Synonym: Cag_0430
Alternate gene names: NA
Gene position: 503802-502684 (Counterclockwise)
Preceding gene: 78188409
Following gene: 78188402
Centisome position: 19.59
GC content: 47.81
Gene sequence:
>1119_bases ATGCGCAACTTACGCAACCTCGGTTTTTGCTACGGGCAGAATATGATGTGGCTGCACCGCCGCAAACACCCACGCCTTGC CCAACTATTGCGCAGCGCCCTTCCCATTCAGCTCAACGAAAGCTCCAAAATTGTTATACTCAGCGACCTCCACATGGGCG ATGGCAGCCGCTTCGACGAATTCCGCACCAATGCAGAGCTTGTTTATACCATGCTGCACAACTACTACCACCCACGCCAC TTTTCATTGGTGCTTAATGGCGATATTGAAGAGCTGCTAAAATTCCCCCTCTATGCCATTGAAACACAATGGAATGAATT TTACCCACTCTTTCGCAGCTTTCAACACAACGGCTTTTTTTGGAAAACATGGGGCAACCACGATGCACCCCTGCTCGACG AAAAAGAGTATCAATTGAGTGATTACCTGCTTGAGTCGCTAAAATTTCACTACAAAGAGGAAAGCCTCCTGCTCTTTCAC GGACACCAAGCCTCCGTCTTTATGTGGGAAACATTCCCTATGGTAAGCCACCTTGCCGTCCTCATTTTACGCTACCTTGC CAAACCCACAGGCATTAAAAACTTCTCGGTAGCCCACAACAGCCGCCGCCGATTTGCCGTAGAAAAAGCCATTTACGAAT TCTCAAATCGCGAAAAAATTGTCTCCATTATTGGACACACCCATCGCCCACTCTTTGAATCACTCTCCAAACTCGACTTT TTAAATTATAAAATAGAGGATCTTTGCCGCCACTACCCCACCACGATTGGCGAAGAGCGCAGCACCGTTCGCCAGCAAAT GCAAACCATGAAAAAAGAGCTTGAAGCCTGCTATCAGCAAGGCAAAAAAATTGGGTTACGCAGCGGCATTTACCATACGC TCACCATTCCAAGCCTTTTTAACTCAGGCTGCACCATTGGCAAACGAGGTATTACCGCCCTTGAAATTGAAGGCAACACC ATCCGCCTTGTAGGCTGGTACAACAGCAAAGAGCAGCCACGCTTTGCCACCAACCACAATCAAACACCGCATCAGCTTGC CTCCACCAACTACTACCGCACTATTTTAAACGAAGAGCCGCTCGACTACATTTTTTCACGCTTGCATTTATTAGCGTAA
Upstream 100 bases:
>100_bases CCCATTAATAGCCAAGCCACCTTTATGGCAAAAGCCACACCGCAACGCTCACGCCATCTGTAAATCACCAATAAGCACCC AATAAGCAAGCACCAACGCA
Downstream 100 bases:
>100_bases GGGAGGAGGAGATGGGAGAGAGAGGGAAATGCTACGAAGAAAAGTGAATTATAAAGATATATTAATAGCTATCAGGCAAA AGAATCAGTATCATATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRNLRNLGFCYGQNMMWLHRRKHPRLAQLLRSALPIQLNESSKIVILSDLHMGDGSRFDEFRTNAELVYTMLHNYYHPRH FSLVLNGDIEELLKFPLYAIETQWNEFYPLFRSFQHNGFFWKTWGNHDAPLLDEKEYQLSDYLLESLKFHYKEESLLLFH GHQASVFMWETFPMVSHLAVLILRYLAKPTGIKNFSVAHNSRRRFAVEKAIYEFSNREKIVSIIGHTHRPLFESLSKLDF LNYKIEDLCRHYPTTIGEERSTVRQQMQTMKKELEACYQQGKKIGLRSGIYHTLTIPSLFNSGCTIGKRGITALEIEGNT IRLVGWYNSKEQPRFATNHNQTPHQLASTNYYRTILNEEPLDYIFSRLHLLA
Sequences:
>Translated_372_residues MRNLRNLGFCYGQNMMWLHRRKHPRLAQLLRSALPIQLNESSKIVILSDLHMGDGSRFDEFRTNAELVYTMLHNYYHPRH FSLVLNGDIEELLKFPLYAIETQWNEFYPLFRSFQHNGFFWKTWGNHDAPLLDEKEYQLSDYLLESLKFHYKEESLLLFH GHQASVFMWETFPMVSHLAVLILRYLAKPTGIKNFSVAHNSRRRFAVEKAIYEFSNREKIVSIIGHTHRPLFESLSKLDF LNYKIEDLCRHYPTTIGEERSTVRQQMQTMKKELEACYQQGKKIGLRSGIYHTLTIPSLFNSGCTIGKRGITALEIEGNT IRLVGWYNSKEQPRFATNHNQTPHQLASTNYYRTILNEEPLDYIFSRLHLLA >Mature_372_residues MRNLRNLGFCYGQNMMWLHRRKHPRLAQLLRSALPIQLNESSKIVILSDLHMGDGSRFDEFRTNAELVYTMLHNYYHPRH FSLVLNGDIEELLKFPLYAIETQWNEFYPLFRSFQHNGFFWKTWGNHDAPLLDEKEYQLSDYLLESLKFHYKEESLLLFH GHQASVFMWETFPMVSHLAVLILRYLAKPTGIKNFSVAHNSRRRFAVEKAIYEFSNREKIVSIIGHTHRPLFESLSKLDF LNYKIEDLCRHYPTTIGEERSTVRQQMQTMKKELEACYQQGKKIGLRSGIYHTLTIPSLFNSGCTIGKRGITALEIEGNT IRLVGWYNSKEQPRFATNHNQTPHQLASTNYYRTILNEEPLDYIFSRLHLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43897; Mature: 43897
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLRNLGFCYGQNMMWLHRRKHPRLAQLLRSALPIQLNESSKIVILSDLHMGDGSRFDE CCCCCCCCHHCCCCCHHHHHCCCCHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCHHH FRTNAELVYTMLHNYYHPRHFSLVLNGDIEELLKFPLYAIETQWNEFYPLFRSFQHNGFF HHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHEEECCHHHHHHHHHHHCCCCEE WKTWGNHDAPLLDEKEYQLSDYLLESLKFHYKEESLLLFHGHQASVFMWETFPMVSHLAV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHH LILRYLAKPTGIKNFSVAHNSRRRFAVEKAIYEFSNREKIVSIIGHTHRPLFESLSKLDF HHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH LNYKIEDLCRHYPTTIGEERSTVRQQMQTMKKELEACYQQGKKIGLRSGIYHTLTIPSLF HCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECHHHH NSGCTIGKRGITALEIEGNTIRLVGWYNSKEQPRFATNHNQTPHQLASTNYYRTILNEEP CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCC LDYIFSRLHLLA HHHHHHHHHHCC >Mature Secondary Structure MRNLRNLGFCYGQNMMWLHRRKHPRLAQLLRSALPIQLNESSKIVILSDLHMGDGSRFDE CCCCCCCCHHCCCCCHHHHHCCCCHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCHHH FRTNAELVYTMLHNYYHPRHFSLVLNGDIEELLKFPLYAIETQWNEFYPLFRSFQHNGFF HHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHEEECCHHHHHHHHHHHCCCCEE WKTWGNHDAPLLDEKEYQLSDYLLESLKFHYKEESLLLFHGHQASVFMWETFPMVSHLAV EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHH LILRYLAKPTGIKNFSVAHNSRRRFAVEKAIYEFSNREKIVSIIGHTHRPLFESLSKLDF HHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH LNYKIEDLCRHYPTTIGEERSTVRQQMQTMKKELEACYQQGKKIGLRSGIYHTLTIPSLF HCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECHHHH NSGCTIGKRGITALEIEGNTIRLVGWYNSKEQPRFATNHNQTPHQLASTNYYRTILNEEP CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCC LDYIFSRLHLLA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA