Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78188355

Identifier: 78188355

GI number: 78188355

Start: 433195

End: 433866

Strand: Reverse

Name: 78188355

Synonym: Cag_0377

Alternate gene names: NA

Gene position: 433866-433195 (Counterclockwise)

Preceding gene: 78188356

Following gene: 78188354

Centisome position: 16.87

GC content: 28.12

Gene sequence:

>672_bases
GTGATGAATAAGCTATTCAACTTGTATTGTGATGAAAGTACACATCTTCAAAATGATGGTATGCCCTATATGATGATAGC
ATACATTCGTTCACCATATAATGAAATAGAACAGCATAAAGAATACCTAAAATTTTTAAAAGCAAAACACAAGTTTAAAG
GTGAAACAAAATGGACAAGTGTTTCTGCTGGTCAGTACCTTTATTATGCTGATTTGATAGACTATTTTTTTTCAACTGAT
TTGTGTTTTCGTTCAATAATAGTTGATAAATCTCAAATTAATGAAAATTGTCCTGAATTTTCATATGACGATTTCTATTT
CAAAATGTATTATCAACTTATACATCATAAAGTTGATTTAGGGTATCACTATAATATATATATTGATATTAAGGATACAA
GAAGTAATAAAAAACTCGCAAAACTACATGAGATTTTAAAGCTAAATACATCAATAAAAAACTGTCAATTTATGCGATCA
CATGAAAGCTCTTTAATGCAGCTTACTGATCTAATTATGGGAGCAATTAATTACAAACTAAGAGGTTATAACAGGGTGAT
TGCAAAAAACAAGATTATTGAAAAGATTGAGCAACATTCAAAGGTGCCAATAACACGATCAACACCTAAACATGCTGATA
AATTTAATCTGTTTTTTATTGATCTTAAGTAA

Upstream 100 bases:

>100_bases
CAGCGTTATGAATATAAAAGTAGTAAGTGCAAAGATGAGGAACTTGCTAAGAAAACTAAATAATGAGTACAAAATTTTTT
AATACTTTAATTCAGTTATT

Downstream 100 bases:

>100_bases
AAAGTGATTATGCCTTTGAATTTGCTAAAAAAATATCCCGAATTATTAGAAATAGCTCATATGAGTGAAGCTGATAGAAA
TTCATCACTGTATGCTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MMNKLFNLYCDESTHLQNDGMPYMMIAYIRSPYNEIEQHKEYLKFLKAKHKFKGETKWTSVSAGQYLYYADLIDYFFSTD
LCFRSIIVDKSQINENCPEFSYDDFYFKMYYQLIHHKVDLGYHYNIYIDIKDTRSNKKLAKLHEILKLNTSIKNCQFMRS
HESSLMQLTDLIMGAINYKLRGYNRVIAKNKIIEKIEQHSKVPITRSTPKHADKFNLFFIDLK

Sequences:

>Translated_223_residues
MMNKLFNLYCDESTHLQNDGMPYMMIAYIRSPYNEIEQHKEYLKFLKAKHKFKGETKWTSVSAGQYLYYADLIDYFFSTD
LCFRSIIVDKSQINENCPEFSYDDFYFKMYYQLIHHKVDLGYHYNIYIDIKDTRSNKKLAKLHEILKLNTSIKNCQFMRS
HESSLMQLTDLIMGAINYKLRGYNRVIAKNKIIEKIEQHSKVPITRSTPKHADKFNLFFIDLK
>Mature_223_residues
MMNKLFNLYCDESTHLQNDGMPYMMIAYIRSPYNEIEQHKEYLKFLKAKHKFKGETKWTSVSAGQYLYYADLIDYFFSTD
LCFRSIIVDKSQINENCPEFSYDDFYFKMYYQLIHHKVDLGYHYNIYIDIKDTRSNKKLAKLHEILKLNTSIKNCQFMRS
HESSLMQLTDLIMGAINYKLRGYNRVIAKNKIIEKIEQHSKVPITRSTPKHADKFNLFFIDLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26719; Mature: 26719

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKLFNLYCDESTHLQNDGMPYMMIAYIRSPYNEIEQHKEYLKFLKAKHKFKGETKWTS
CCCCHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VSAGQYLYYADLIDYFFSTDLCFRSIIVDKSQINENCPEFSYDDFYFKMYYQLIHHKVDL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
GYHYNIYIDIKDTRSNKKLAKLHEILKLNTSIKNCQFMRSHESSLMQLTDLIMGAINYKL
CEEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGYNRVIAKNKIIEKIEQHSKVPITRSTPKHADKFNLFFIDLK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MMNKLFNLYCDESTHLQNDGMPYMMIAYIRSPYNEIEQHKEYLKFLKAKHKFKGETKWTS
CCCCHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VSAGQYLYYADLIDYFFSTDLCFRSIIVDKSQINENCPEFSYDDFYFKMYYQLIHHKVDL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
GYHYNIYIDIKDTRSNKKLAKLHEILKLNTSIKNCQFMRSHESSLMQLTDLIMGAINYKL
CEEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGYNRVIAKNKIIEKIEQHSKVPITRSTPKHADKFNLFFIDLK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA