Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
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Accession | NC_007514 |
Length | 2,572,079 |
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The map label for this gene is 78188354
Identifier: 78188354
GI number: 78188354
Start: 432649
End: 433185
Strand: Reverse
Name: 78188354
Synonym: Cag_0376
Alternate gene names: NA
Gene position: 433185-432649 (Counterclockwise)
Preceding gene: 78188355
Following gene: 78188352
Centisome position: 16.84
GC content: 31.1
Gene sequence:
>537_bases ATGCCTTTGAATTTGCTAAAAAAATATCCCGAATTATTAGAAATAGCTCATATGAGTGAAGCTGATAGAAATTCATCACT GTATGCTATTTTTAATCGAGATTTTGTGCAAAATGATAACCTATACTTTCAAGGAAAAAAAGTAAGACCGATAAAAGGAG AAGATGGAGCTATTGCTATGGATGTATTATTCCAACATTTAACAACAAGTAGCGATAAAGAAAAGTCATCTCTTAATAGA AATGCAAGAACTTTTGAAATGGCTCGTTCTTGTAGGTTACATTGGATTAGGTATCATATTGATAAATCGGCTGGAAAAGG AGTAAAGATATTTAGCTGTGAAGAAAGAGATCAGAAAAGAAGAAAAGATGTTATTAGAACATACATTTTTGATGTTGACC AGAAATATGTAATTATTTTAGAACCACAAAGGAGTGGGAATGATTACTATCTCTTAACTGCTTATTATTTGGATAGAGAT GATGGTAAGAAGCAAATAGAAAAAAAATTCAAGCAGCGTATGAAGGAAGTGCTATAA
Upstream 100 bases:
>100_bases AAAGATTGAGCAACATTCAAAGGTGCCAATAACACGATCAACACCTAAACATGCTGATAAATTTAATCTGTTTTTTATTG ATCTTAAGTAAAAAGTGATT
Downstream 100 bases:
>100_bases AACCGCAAGGCTCGGTGCACATCTTGATGCATCGAGCCTCGAAACTCCTTTCTCCGATTGTGGTAGAATGAGCATGGCAA ATGTAAGCAATAGCATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPLNLLKKYPELLEIAHMSEADRNSSLYAIFNRDFVQNDNLYFQGKKVRPIKGEDGAIAMDVLFQHLTTSSDKEKSSLNR NARTFEMARSCRLHWIRYHIDKSAGKGVKIFSCEERDQKRRKDVIRTYIFDVDQKYVIILEPQRSGNDYYLLTAYYLDRD DGKKQIEKKFKQRMKEVL
Sequences:
>Translated_178_residues MPLNLLKKYPELLEIAHMSEADRNSSLYAIFNRDFVQNDNLYFQGKKVRPIKGEDGAIAMDVLFQHLTTSSDKEKSSLNR NARTFEMARSCRLHWIRYHIDKSAGKGVKIFSCEERDQKRRKDVIRTYIFDVDQKYVIILEPQRSGNDYYLLTAYYLDRD DGKKQIEKKFKQRMKEVL >Mature_177_residues PLNLLKKYPELLEIAHMSEADRNSSLYAIFNRDFVQNDNLYFQGKKVRPIKGEDGAIAMDVLFQHLTTSSDKEKSSLNRN ARTFEMARSCRLHWIRYHIDKSAGKGVKIFSCEERDQKRRKDVIRTYIFDVDQKYVIILEPQRSGNDYYLLTAYYLDRDD GKKQIEKKFKQRMKEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21140; Mature: 21008
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNLLKKYPELLEIAHMSEADRNSSLYAIFNRDFVQNDNLYFQGKKVRPIKGEDGAIAM CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEECCEECCCCCCCCCCHH DVLFQHLTTSSDKEKSSLNRNARTFEMARSCRLHWIRYHIDKSAGKGVKIFSCEERDQKR HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHH RKDVIRTYIFDVDQKYVIILEPQRSGNDYYLLTAYYLDRDDGKKQIEKKFKQRMKEVL HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PLNLLKKYPELLEIAHMSEADRNSSLYAIFNRDFVQNDNLYFQGKKVRPIKGEDGAIAM CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEECCEECCCCCCCCCCHH DVLFQHLTTSSDKEKSSLNRNARTFEMARSCRLHWIRYHIDKSAGKGVKIFSCEERDQKR HHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHH RKDVIRTYIFDVDQKYVIILEPQRSGNDYYLLTAYYLDRDDGKKQIEKKFKQRMKEVL HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA