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The map label for this gene is 78188356

Identifier: 78188356

GI number: 78188356

Start: 434114

End: 435541

Strand: Reverse

Name: 78188356

Synonym: Cag_0378

Alternate gene names: NA

Gene position: 435541-434114 (Counterclockwise)

Preceding gene: 78188357

Following gene: 78188355

Centisome position: 16.93

GC content: 35.29

Gene sequence:

>1428_bases
ATGAGCAACGCAAAAATATTTTACCACGATATTGGCGATTATTATAGCAGAGAAGAAAAACTTGCACTTATTAAAAAATA
TCATTCTCTTGCTCATCCTAACATGCAGTGGCAACAATTGCAGCCAAATGAACATGGAGATTGGATTAGCCAAAGAAATG
ACCTATTTGAAACGTTTATTCCTCTTGGTGATAAAGAAAATAAAAAAGCAGATACGTTTTTTGTTCCGTTTTATAGTAGA
GGACTTGCTTCAGCACGAGATTCTTGGTGCTACAATTCATCAAAAACAACATTAGAAAATAATATTAGAACTTTAATTGA
ATTTTATAACCAACAGCGAATAGCATATTTTAATACTATAGATAAAGATTCAAAAATTACAGTTGAGAATTTTATTGATT
ATGATTCTTCAAAAATTACATGGAATCGTGGACTAAAAAATGACTTAGAAAAAAATAAAGCAATTGATTTTAATCGTGAT
TATATAATAACAGGATTATATAGACCATTCAACAAGCAAAAAATTTATTTTGCAAGAGAGTTAAATGACATGGTTTATCA
AATTCCTAAAATTTTTCCTGCATCAAATAGTAAAAATTATGTTATTTGCGTTTCAGGAGTTGGTGCAAGTAAAGATTTTT
CTGTATTGATTACAAATTGTATTCCTGATATTCAGCTCCAATTTAATGGACAATGCTTTCCCCTCTACTACTACGAAAAG
CAAGAAAAAAGTAATCCAACTCTTTTTGATGCTGCCAAAGAACCCGACTACATCCGCCGCGATGGAGTATCAAACTTTAT
TCTCGAACAAGCACAAAAACGCTACGGCAACCGCGTAACTAAAGAAGATATATTCTACTACGTTTATGGTATTCTCCACA
GCCCTGATTACCGCACTCGCTTTGCCTCCGACCTCAAAAAAATGCTGCCCCGTTTGCCATTGGTAGAAAACGTAAAAGAC
TTCTGGCACTTCAGCAAAGCAGGACGCGAATTAGCAGAACTGCACATCAATTACGAAGCCGTGCCACCAGCAAAAGGCGT
GATACTACTTTATAATAATATCCCTACTGAAGAAATTGAAAAAGGCTTGCAAAGCAGCAAAATGCAAGAGATCAATTACA
TGGTAACAAAAATGCGCTTTCCAAAAAAAGATCAAAAAGATACCATTCATTACAACAACCAAATTACCATTACGAACATT
CCGCTCAAAGCCTACGACTACATAGTTAACGGCAAAAGCGCCATCGAATGGATAATGGAACGCTATCAAATAACCACACA
CAAAGAAAGCGGCATCACCAACAACCCCAACGATTGGGCAACAGAAGTAGGCAACCCACGCTATATTCTCGATTTATTGC
TCAGCATAATCAACGTAAGCCTTCAAACCGTAGAAATTGTAAACAACTTACCGAAGTTGGAGTTTTAA

Upstream 100 bases:

>100_bases
ACCGATACTCTACCTGAAAACTATCGCAAGCAATTGCCCTCTGCCGAAGAGCTGGCAATCAAATTAGAAGCATTCATTGA
AATGACTAAAAAAAAATAGC

Downstream 100 bases:

>100_bases
TGATCTGTAGAATGAAGATGAATTTTACAGGTAAATGCTTTTGATAACAATAAGTTAGTTATTATCACTATGTTTGATCC
TGAAAATATTAAGGCAATTC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: Helicase; Superfamily II DNA/RNA Helicase; Adenine Specific DNA Methyltransferase; Type III Restriction Protein Res Subunit; Helicase Domain-Containing Protein; Type III Restriction Res Subunit; Helicase Domain Protein; Endonuclease And Methylase LlaGI; N-6 DNA Methylase Family; DNA Helicase Restriction Type III R Subunit; ATP-Dependent RNA Helicase; Type II R-M System Protein; Restriction- System LlaBIII; Restriction/

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MSNAKIFYHDIGDYYSREEKLALIKKYHSLAHPNMQWQQLQPNEHGDWISQRNDLFETFIPLGDKENKKADTFFVPFYSR
GLASARDSWCYNSSKTTLENNIRTLIEFYNQQRIAYFNTIDKDSKITVENFIDYDSSKITWNRGLKNDLEKNKAIDFNRD
YIITGLYRPFNKQKIYFARELNDMVYQIPKIFPASNSKNYVICVSGVGASKDFSVLITNCIPDIQLQFNGQCFPLYYYEK
QEKSNPTLFDAAKEPDYIRRDGVSNFILEQAQKRYGNRVTKEDIFYYVYGILHSPDYRTRFASDLKKMLPRLPLVENVKD
FWHFSKAGRELAELHINYEAVPPAKGVILLYNNIPTEEIEKGLQSSKMQEINYMVTKMRFPKKDQKDTIHYNNQITITNI
PLKAYDYIVNGKSAIEWIMERYQITTHKESGITNNPNDWATEVGNPRYILDLLLSIINVSLQTVEIVNNLPKLEF

Sequences:

>Translated_475_residues
MSNAKIFYHDIGDYYSREEKLALIKKYHSLAHPNMQWQQLQPNEHGDWISQRNDLFETFIPLGDKENKKADTFFVPFYSR
GLASARDSWCYNSSKTTLENNIRTLIEFYNQQRIAYFNTIDKDSKITVENFIDYDSSKITWNRGLKNDLEKNKAIDFNRD
YIITGLYRPFNKQKIYFARELNDMVYQIPKIFPASNSKNYVICVSGVGASKDFSVLITNCIPDIQLQFNGQCFPLYYYEK
QEKSNPTLFDAAKEPDYIRRDGVSNFILEQAQKRYGNRVTKEDIFYYVYGILHSPDYRTRFASDLKKMLPRLPLVENVKD
FWHFSKAGRELAELHINYEAVPPAKGVILLYNNIPTEEIEKGLQSSKMQEINYMVTKMRFPKKDQKDTIHYNNQITITNI
PLKAYDYIVNGKSAIEWIMERYQITTHKESGITNNPNDWATEVGNPRYILDLLLSIINVSLQTVEIVNNLPKLEF
>Mature_474_residues
SNAKIFYHDIGDYYSREEKLALIKKYHSLAHPNMQWQQLQPNEHGDWISQRNDLFETFIPLGDKENKKADTFFVPFYSRG
LASARDSWCYNSSKTTLENNIRTLIEFYNQQRIAYFNTIDKDSKITVENFIDYDSSKITWNRGLKNDLEKNKAIDFNRDY
IITGLYRPFNKQKIYFARELNDMVYQIPKIFPASNSKNYVICVSGVGASKDFSVLITNCIPDIQLQFNGQCFPLYYYEKQ
EKSNPTLFDAAKEPDYIRRDGVSNFILEQAQKRYGNRVTKEDIFYYVYGILHSPDYRTRFASDLKKMLPRLPLVENVKDF
WHFSKAGRELAELHINYEAVPPAKGVILLYNNIPTEEIEKGLQSSKMQEINYMVTKMRFPKKDQKDTIHYNNQITITNIP
LKAYDYIVNGKSAIEWIMERYQITTHKESGITNNPNDWATEVGNPRYILDLLLSIINVSLQTVEIVNNLPKLEF

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55751; Mature: 55620

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAKIFYHDIGDYYSREEKLALIKKYHSLAHPNMQWQQLQPNEHGDWISQRNDLFETFI
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHC
PLGDKENKKADTFFVPFYSRGLASARDSWCYNSSKTTLENNIRTLIEFYNQQRIAYFNTI
CCCCCCCCCCCEEEECHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
DKDSKITVENFIDYDSSKITWNRGLKNDLEKNKAIDFNRDYIITGLYRPFNKQKIYFARE
CCCCEEEHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEHHH
LNDMVYQIPKIFPASNSKNYVICVSGVGASKDFSVLITNCIPDIQLQFNGQCFPLYYYEK
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHEEEECCCCCCEEEECCEEEEEEEEEC
QEKSNPTLFDAAKEPDYIRRDGVSNFILEQAQKRYGNRVTKEDIFYYVYGILHSPDYRTR
CCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCHHHH
FASDLKKMLPRLPLVENVKDFWHFSKAGRELAELHINYEAVPPAKGVILLYNNIPTEEIE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECEEECCCCCCEEEEECCCCHHHHH
KGLQSSKMQEINYMVTKMRFPKKDQKDTIHYNNQITITNIPLKAYDYIVNGKSAIEWIME
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCHHHHHEEECCHHHHHHHHH
RYQITTHKESGITNNPNDWATEVGNPRYILDLLLSIINVSLQTVEIVNNLPKLEF
HHHEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNAKIFYHDIGDYYSREEKLALIKKYHSLAHPNMQWQQLQPNEHGDWISQRNDLFETFI
CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHC
PLGDKENKKADTFFVPFYSRGLASARDSWCYNSSKTTLENNIRTLIEFYNQQRIAYFNTI
CCCCCCCCCCCEEEECHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
DKDSKITVENFIDYDSSKITWNRGLKNDLEKNKAIDFNRDYIITGLYRPFNKQKIYFARE
CCCCEEEHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEHHH
LNDMVYQIPKIFPASNSKNYVICVSGVGASKDFSVLITNCIPDIQLQFNGQCFPLYYYEK
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHEEEECCCCCCEEEECCEEEEEEEEEC
QEKSNPTLFDAAKEPDYIRRDGVSNFILEQAQKRYGNRVTKEDIFYYVYGILHSPDYRTR
CCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCHHHH
FASDLKKMLPRLPLVENVKDFWHFSKAGRELAELHINYEAVPPAKGVILLYNNIPTEEIE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECEEECCCCCCEEEEECCCCHHHHH
KGLQSSKMQEINYMVTKMRFPKKDQKDTIHYNNQITITNIPLKAYDYIVNGKSAIEWIME
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEECCHHHHHEEECCHHHHHHHHH
RYQITTHKESGITNNPNDWATEVGNPRYILDLLLSIINVSLQTVEIVNNLPKLEF
HHHEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA