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The map label for this gene is yajR [H]

Identifier: 78067577

GI number: 78067577

Start: 3250206

End: 3251393

Strand: Reverse

Name: yajR [H]

Synonym: Bcep18194_A6108

Alternate gene names: 78067577

Gene position: 3251393-3250206 (Counterclockwise)

Preceding gene: 78067580

Following gene: 78067576

Centisome position: 88.02

GC content: 65.66

Gene sequence:

>1188_bases
ATGTCCAATCCGTCTGCCACGTCTTCCCGCATGACTGCGCCCGAATTGCGCGCGACCACGTCGCTCGCGGCGATCTTCGC
GCTGCGCATGCTCGGCCTGTTCATGATCATGCCGGTGTTCTCGGTCTACGCGAAAACCATCCCGGGCGGCGACAACGTGC
TGCTCGTCGGTATCGCGCTCGGGGCCTACGGCGTCACGCAATCGCTGTTCTATATCTTCTACGGCTGGGCGTCCGACAAG
TTCGGCCGCAAGCCGGTGATCGCCACCGGTCTCGTGATCTTCGCGATCGGCAGCTTCGTCGCCGCGTCCGCGCATGACAT
CACGTGGATCATCGTCGGCCGCGTGATCCAGGGGATGGGCGCGGTGTCGTCCGCGGTGCTCGCGTTCATCGCCGACCTGA
CCTCCGAGCAGAACCGCACGAAGGCGATGGCGATGGTCGGCGGCTCGATCGGCGTGTCGTTCGCGGTCGCGATCGTGGGC
GCGCCGATCGTGTTCCATTGGGTCGGGATGAGCGGGCTGTTCGCGATCGTCGGCGTGCTGTCGATCCTCGCGATCGGCGT
CGTGCTGTGGATCGTGCCCGACGCAGCGAAGCCCGTGCACGTGCCCGCGCCGTTCGCCGAGGTGCTGCACAACGTCGAGC
TGCTGCGCCTGAACTTCGGCGTGCTGGTGCTGCACGCGACTCAGACGGCGCTGTTCCTTGTCGTACCGCGCCTGCTCGTT
GACGGCGGCCTGCCGGTCGCCGCGCACTGGAAGGTCTACCTGCCGGTGATGGGGCTCGCGTTCGTGATGATGGTCCCGGC
GATCATCGTCGCGGAAAAACGGGGCAAGATGAAGCCGGTGCTGCTTGGCGGCATCCTGGCTATCCTGATCGGCCAATTGC
TGCTGGGCAGCGCGCCGCATACCATCCTGATTGTGGCAGCGGTTCTTTTCGTCTACTTCCTCGGTTTCAACATCCTGGAA
GCGTCGCAGCCGTCGCTCGTATCGAAGCTCGCGCCCGGTTCGCGCAAGGGCGCGGCCACAGGTGTTTACAACACCACGCA
GTCGATCGGGCTCGCGCTCGGCGGCATCGTGGGCGGCTGGCTGCTGAAGCACGGGGGCGCCAATACGGTGTTCTACACGT
GCTCGGGGCTCGTTGCCGCGTGGCTTATAATCGCGGCCAGCATGAAAGCGCCGCCGCGCAAGGCCTGA

Upstream 100 bases:

>100_bases
TGCCCCGACGTGTTGCCGGCCAAGCCTCCCGGGCCGCTGGTCCTGATCTTCCGCCGCCCGGTGTCGGGCGGTCATTCCGA
TCATTCGAAATTCATTCCCG

Downstream 100 bases:

>100_bases
ACTCATTTCGGGCAGGTACCGGCGGCGTTCGCCGGCTTGCCCGGCGGGCCGCACCGACAGCATGAGCGGGCGGCCCGGCA
TCGAATTTACTGGAGAAACA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDK
FGRKPVIATGLVIFAIGSFVAASAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVG
APIVFHWVGMSGLFAIVGVLSILAIGVVLWIVPDAAKPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAVLFVYFLGFNILE
ASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAASMKAPPRKA

Sequences:

>Translated_395_residues
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDK
FGRKPVIATGLVIFAIGSFVAASAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVG
APIVFHWVGMSGLFAIVGVLSILAIGVVLWIVPDAAKPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAVLFVYFLGFNILE
ASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAASMKAPPRKA
>Mature_394_residues
SNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIALGAYGVTQSLFYIFYGWASDKF
GRKPVIATGLVIFAIGSFVAASAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGA
PIVFHWVGMSGLFAIVGVLSILAIGVVLWIVPDAAKPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLVD
GGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPHTILIVAAVLFVYFLGFNILEA
SQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGWLLKHGGANTVFYTCSGLVAAWLIIAASMKAPPRKA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=42.9305912596401, Blast_Score=312, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41210; Mature: 41079

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
GAYGVTQSLFYIFYGWASDKFGRKPVIATGLVIFAIGSFVAASAHDITWIIVGRVIQGMG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGAPIVFHWVGMSGLFAIVGVL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SILAIGVVLWIVPDAAKPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHH
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPH
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
TILIVAAVLFVYFLGFNILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLKHGGANTVFYTCSGLVAAWLIIAASMKAPPRKA
HHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SNPSATSSRMTAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVLLVGIAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHH
GAYGVTQSLFYIFYGWASDKFGRKPVIATGLVIFAIGSFVAASAHDITWIIVGRVIQGMG
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AVSSAVLAFIADLTSEQNRTKAMAMVGGSIGVSFAVAIVGAPIVFHWVGMSGLFAIVGVL
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SILAIGVVLWIVPDAAKPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHH
DGGLPVAAHWKVYLPVMGLAFVMMVPAIIVAEKRGKMKPVLLGGILAILIGQLLLGSAPH
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
TILIVAAVLFVYFLGFNILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGIVGGW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LLKHGGANTVFYTCSGLVAAWLIIAASMKAPPRKA
HHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]