Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is insQ [H]
Identifier: 78067545
GI number: 78067545
Start: 3218701
End: 3218880
Strand: Reverse
Name: insQ [H]
Synonym: Bcep18194_A6076
Alternate gene names: 78067545
Gene position: 3218880-3218701 (Counterclockwise)
Preceding gene: 78067546
Following gene: 78067544
Centisome position: 87.14
GC content: 68.33
Gene sequence:
>180_bases GTGAGCGCCGGAAATCGGCAGACGCAGGCGGCATTCCGCTGTGTCGGGTGCGGGCATGAGGGCCATGCCGATGTGGTCGG TGCGATCAACATACTGGCGCGGGGGCACCGCGTTGCAGCCTGTGGAGAGCCGGTGCAGTCGGGCCGCTCCGTGAAGCAGG AACCCGCCGAGGCGATCTGA
Upstream 100 bases:
>100_bases TGGGCGGCAAGTGGTATTTCAACGTCCATACGAAGGACCACCCGTCCGGCGAGATCCGCGGCCAGGTGATGCCGGCGAAC TGAGTGCCGGCGTTTGATCC
Downstream 100 bases:
>100_bases GACAAGCATCATCGTTTCAAACGCGGTAGGAATCCCGAGCCTTCAGGCGCGGGAGGATGTCAAGTAGAGGCACTTGTCGA GCGGTGCGGGAACGTTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MSAGNRQTQAAFRCVGCGHEGHADVVGAINILARGHRVAACGEPVQSGRSVKQEPAEAI
Sequences:
>Translated_59_residues MSAGNRQTQAAFRCVGCGHEGHADVVGAINILARGHRVAACGEPVQSGRSVKQEPAEAI >Mature_58_residues SAGNRQTQAAFRCVGCGHEGHADVVGAINILARGHRVAACGEPVQSGRSVKQEPAEAI
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Escherichia coli, GI288549314, Length=55, Percent_Identity=63.6363636363636, Blast_Score=70, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 6070; Mature: 5939
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGNRQTQAAFRCVGCGHEGHADVVGAINILARGHRVAACGEPVQSGRSVKQEPAEAI CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAGNRQTQAAFRCVGCGHEGHADVVGAINILARGHRVAACGEPVQSGRSVKQEPAEAI CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]