Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is ywrD [H]
Identifier: 78067470
GI number: 78067470
Start: 3134848
End: 3136488
Strand: Reverse
Name: ywrD [H]
Synonym: Bcep18194_A6001
Alternate gene names: 78067470
Gene position: 3136488-3134848 (Counterclockwise)
Preceding gene: 78067473
Following gene: 78067469
Centisome position: 84.9
GC content: 68.86
Gene sequence:
>1641_bases ATGACTGGCTTCAACTGGCACAACCCGTATCCGACGACCCGCATTCCGGTGTTTGCACGCAACGTCGTGTCGACGTCGCA CCCGCTCGCTGCGCAGGCCGGGCTGCGGATGCTGTGGAAGGGCGGCAACGCGGTCGACGCGGCGCTGGCCGCTGCCGCCG CGCTCACGGTCGTCGAGCCCGTATCGTGCGGGCTCGGCGGCGACGCGTTCGCGCTCGTGTGGGACGGTGAGCGATTGTCC GGGCTGAACGCGTCGGGCGTCGGGCCGGCCGCGTGGAACGTCGACTATTTCCGCAAGCGCCACGGCGAGGCGGGCAACGG CATCGCGAACAAGCCGACGCGCGGCTGGGATACCGTCACCGTGCCGGGCGTGATCGCGGGCTGGGAAGCGCTGCATGCGA AGTTCGGTTCGCTGCCGTTCGCGGACCTGCTCGAGCCGGCGATCGAGATCGCGGAGCGCGGCTATGCGGTGCCGCCGATC GTCGCGCACAAGTGGGCGGCCGCGGTGCCGGAACTCAAGGGGCTGCCGGGTTTCGCGGATACCTTCATGCCGCACGGCCG CGCACCGCAGGTGGGCGAGCGCGTGTGCCTGCCGGGCCATGCGCAGACGCTGCGCACGCTGCAGAAGGAAGGCGCCCGCG CGTTCTACGAGGGCGTGCTCGCCGAGCGCATCGCCGCGTTCTCCCGCGAAGGCGGCGGCGCGCTGACCGCGGCCGACCTG CATGCTTACCGGCCGGAATGGGTCGAGCCGATCGGCAAGCGCTTCGGCCGTCACACGATCCACGAGATTCCGCCGAACGG GCAGGGCATCGCGGCGCTGATCGCGCTCGGCATCGCCGAGCACGCGGGCCTGACCGAATGGCCAGTCGATTCGGTCGACT CGCAGCATCTGCAGATCGAGGCGATGAAGCTCGCGTTCGCCGATGTCTATCGCTACGTCGCCGATCCGCGCGCGATGGAG GTCACCCCTGAACAGATGCTCGACGATGCGTATCTCGCCGAACGCGCGAAGCTGATCGATCCCGCGCGCGCGACGCATTT CGGCGCCGGCCGGCCGCATTCGGGCGGCACGGTCTACCTGTCGGCGGCCGACGAGCGCGGGATGATGGTGAGCTTCATCC AGTCGAACTACATGGGCTTCGGCTCGGGGCTCGTGGTGCCCGGCACCGGCATCGCGCTGCAGAATCGCGGGCACGGCTTC TCGATGGATCCGGCTTCGCCGAACGTCGTCGCGGGCGGCAAGCGGCCGTTCCACACGATCATCCCGGCGTTCGTCACCGA GGAGGTCGACGGTCGCACCGAGGCCGTGATGAGCTTCGGCGTGATGGGTGGCGACATGCAGCCGCAAGGCCACCTGCAGA CTGTCGTGCGGATGCTTGGCTACGGGCAACAACCGCAGGCTGCCTGCGATGCGCCGCGCTGGAAGGTCAACCGCGACTTC ACGCTCGACGTCGAGGCAACGATGAATCGCGCGACTGTCGATGCGCTGACCGCACGTGGCCATACGATCAAGTCGATCGA CGATCCTTACATGGATTTCGGTTCGGGGCAGTTCATCTGGCGTCTCGACCGCGACGATCGCGAGCGTGGCTACGTGGCCG CGAGCGACAGCCGGCGCGACGGTCTGGCGGCCGGTTTCTGA
Upstream 100 bases:
>100_bases GAATTTGTGCGATTGTGCCGATCGCGCTGCAATGGCGGATTGCCCGCGCACGCGGGCGCGCGTCCGGCGCGTTCATTCAG CTTTCGACGAGGTGGAATCG
Downstream 100 bases:
>100_bases TGGATTGCTGCCGGCTTTCGCCGGCATGTCGTGCGCTTCGCGGGCGGCCGGATGGCCGCCCGTTTCGTTTGCGGCAGCCC GTATCGCCGAGCGGGCGCAA
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGERLS GLNASGVGPAAWNVDYFRKRHGEAGNGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYAVPPI VAHKWAAAVPELKGLPGFADTFMPHGRAPQVGERVCLPGHAQTLRTLQKEGARAFYEGVLAERIAAFSREGGGALTAADL HAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGLTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAME VTPEQMLDDAYLAERAKLIDPARATHFGAGRPHSGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTVVRMLGYGQQPQAACDAPRWKVNRDF TLDVEATMNRATVDALTARGHTIKSIDDPYMDFGSGQFIWRLDRDDRERGYVAASDSRRDGLAAGF
Sequences:
>Translated_546_residues MTGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGERLS GLNASGVGPAAWNVDYFRKRHGEAGNGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYAVPPI VAHKWAAAVPELKGLPGFADTFMPHGRAPQVGERVCLPGHAQTLRTLQKEGARAFYEGVLAERIAAFSREGGGALTAADL HAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGLTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAME VTPEQMLDDAYLAERAKLIDPARATHFGAGRPHSGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGF SMDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTVVRMLGYGQQPQAACDAPRWKVNRDF TLDVEATMNRATVDALTARGHTIKSIDDPYMDFGSGQFIWRLDRDDRERGYVAASDSRRDGLAAGF >Mature_545_residues TGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAALTVVEPVSCGLGGDAFALVWDGERLSG LNASGVGPAAWNVDYFRKRHGEAGNGIANKPTRGWDTVTVPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYAVPPIV AHKWAAAVPELKGLPGFADTFMPHGRAPQVGERVCLPGHAQTLRTLQKEGARAFYEGVLAERIAAFSREGGGALTAADLH AYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGLTEWPVDSVDSQHLQIEAMKLAFADVYRYVADPRAMEV TPEQMLDDAYLAERAKLIDPARATHFGAGRPHSGGTVYLSAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFS MDPASPNVVAGGKRPFHTIIPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTVVRMLGYGQQPQAACDAPRWKVNRDFT LDVEATMNRATVDALTARGHTIKSIDDPYMDFGSGQFIWRLDRDDRERGYVAASDSRRDGLAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=556, Percent_Identity=27.5179856115108, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI73915090, Length=556, Percent_Identity=27.5179856115108, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI73915096, Length=556, Percent_Identity=27.5179856115108, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI73915094, Length=556, Percent_Identity=27.5179856115108, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI113429324, Length=556, Percent_Identity=26.4388489208633, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI113429326, Length=568, Percent_Identity=26.9366197183099, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI109148539, Length=518, Percent_Identity=27.992277992278, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI153266885, Length=555, Percent_Identity=23.963963963964, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI153266901, Length=556, Percent_Identity=24.1007194244604, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI153266907, Length=553, Percent_Identity=24.0506329113924, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1789856, Length=514, Percent_Identity=29.1828793774319, Blast_Score=178, Evalue=7e-46, Organism=Caenorhabditis elegans, GI212646519, Length=516, Percent_Identity=25.5813953488372, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI72000294, Length=516, Percent_Identity=25.5813953488372, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17506189, Length=528, Percent_Identity=23.4848484848485, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17542894, Length=567, Percent_Identity=23.9858906525573, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI193208245, Length=511, Percent_Identity=25.0489236790607, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193208247, Length=511, Percent_Identity=25.0489236790607, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI161077878, Length=558, Percent_Identity=26.3440860215054, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24642670, Length=558, Percent_Identity=26.3440860215054, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24642666, Length=558, Percent_Identity=26.3440860215054, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI45551474, Length=558, Percent_Identity=26.3440860215054, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI161077880, Length=558, Percent_Identity=26.3440860215054, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI18859741, Length=530, Percent_Identity=25.8490566037736, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI161077496, Length=516, Percent_Identity=26.937984496124, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI18859893, Length=504, Percent_Identity=25, Blast_Score=113, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58605; Mature: 58474
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAALTVVEP CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHH VSCGLGGDAFALVWDGERLSGLNASGVGPAAWNVDYFRKRHGEAGNGIANKPTRGWDTVT HHCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEE VPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYAVPPIVAHKWAAAVPELKGLPGFAD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHH TFMPHGRAPQVGERVCLPGHAQTLRTLQKEGARAFYEGVLAERIAAFSREGGGALTAADL HHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH HAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGLTEWPVDSVDSQHLQIE HHCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH AMKLAFADVYRYVADPRAMEVTPEQMLDDAYLAERAKLIDPARATHFGAGRPHSGGTVYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTVVRMLGYGQQPQAACDAPRWKVNRDF HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCEECCCCE TLDVEATMNRATVDALTARGHTIKSIDDPYMDFGSGQFIWRLDRDDRERGYVAASDSRRD EEEHHHHCCHHHHHHHHHCCCEECCCCCCHHHCCCCCEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC >Mature Secondary Structure TGFNWHNPYPTTRIPVFARNVVSTSHPLAAQAGLRMLWKGGNAVDAALAAAAALTVVEP CCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHH VSCGLGGDAFALVWDGERLSGLNASGVGPAAWNVDYFRKRHGEAGNGIANKPTRGWDTVT HHCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEE VPGVIAGWEALHAKFGSLPFADLLEPAIEIAERGYAVPPIVAHKWAAAVPELKGLPGFAD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHH TFMPHGRAPQVGERVCLPGHAQTLRTLQKEGARAFYEGVLAERIAAFSREGGGALTAADL HHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH HAYRPEWVEPIGKRFGRHTIHEIPPNGQGIAALIALGIAEHAGLTEWPVDSVDSQHLQIE HHCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHH AMKLAFADVYRYVADPRAMEVTPEQMLDDAYLAERAKLIDPARATHFGAGRPHSGGTVYL HHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEE SAADERGMMVSFIQSNYMGFGSGLVVPGTGIALQNRGHGFSMDPASPNVVAGGKRPFHTI EECCCCCCCCEEHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHH IPAFVTEEVDGRTEAVMSFGVMGGDMQPQGHLQTVVRMLGYGQQPQAACDAPRWKVNRDF HHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCEECCCCE TLDVEATMNRATVDALTARGHTIKSIDDPYMDFGSGQFIWRLDRDDRERGYVAASDSRRD EEEHHHHCCHHHHHHHHHCCCEECCCCCCHHHCCCCCEEEEECCCCCCCCEEEECCCCCC GLAAGF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]