Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067469
Identifier: 78067469
GI number: 78067469
Start: 3133693
End: 3134520
Strand: Reverse
Name: 78067469
Synonym: Bcep18194_A6000
Alternate gene names: NA
Gene position: 3134520-3133693 (Counterclockwise)
Preceding gene: 78067470
Following gene: 78067468
Centisome position: 84.85
GC content: 61.47
Gene sequence:
>828_bases ATGGACACCAAAACGACGCATGTGATGCCGTGGCGAATCGAGGACATCGACCTGAACCGGATCGATCGTCAACGTGCCGC CGCGAACGAGGATCTGTTGTTGCTGCTGTGCGCGTCGTCGTTCATCGAAAGCGGCTCGGATCTCTACACGAGCAATCTGA GCCAGTTCTTCAACGACGATCCGGAAGTCTCCGCATGGCTCAACAATGCATGGGAGCACGAAGAATTGCAGCACGGGCGT GCGTTGAAGGCGTACATCGCGCACGTGTGGCCGGAGTTCGACTGGGATACCGCGTTCGCGAATTTCTTCGCCGAGTATTC GAAGACCTGCAAGGTCGAGGCGTTCGAGAAGACCCGCGCGCTCGAGATGGTCGCGCGCTGCGTCGTCGAGACGGGCACGG CCACGCTCTATCGCGCGATCAACGAGTGCTCGGACGAGCCCGTGCTGAAGGAAATCACCGACAACATCCGCACGGACGAA GTGCGCCACTACAAGCACTTCTTCAAGTTCTTCAAGAAGTACAACCAGCTCGAAGGCAATGGCCGGCTCGCGGTGCTCGG CGCGCTGGCGCGCCGCGTGATGGAAATCAAGAACGAGGATTCCGAGATCGCGCTGCGCCACGTGTTCGCGGTCCGCTATC CGGATCGTGTCGGCGACAGCCAGTACAACCGCGAGCGCGCCGCGCGCATCAGCACGCTCGTGCGGCGCAACCTGTCGGCC GACATGTGCGTGAAGATGCTGCTCAAGCCGCTCGACCTGCCCGCGAAGATCCAGCCGGGCGTCCACTATCCGCTCACCAA GATCACGCGGCACGTGTTCCTGCGCTGA
Upstream 100 bases:
>100_bases AATCCACTATAAACGCAAGTAAAACGCCGCCTGCGGGACGGTTGGCGCCTGTGCCGAAGGCATGGGCCGGCCCCCGCGCG ACGACTGGGAGCGCACCACC
Downstream 100 bases:
>100_bases TCGCCGCGGCGCGGCCCGGCGCGCGTATGCTGCGGCATCTTCATCCGCTTTCCACCGGGGCCACGCCATCATGACCGATA CCCATCGCCACGCGCTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDTKTTHVMPWRIEDIDLNRIDRQRAAANEDLLLLLCASSFIESGSDLYTSNLSQFFNDDPEVSAWLNNAWEHEELQHGR ALKAYIAHVWPEFDWDTAFANFFAEYSKTCKVEAFEKTRALEMVARCVVETGTATLYRAINECSDEPVLKEITDNIRTDE VRHYKHFFKFFKKYNQLEGNGRLAVLGALARRVMEIKNEDSEIALRHVFAVRYPDRVGDSQYNRERAARISTLVRRNLSA DMCVKMLLKPLDLPAKIQPGVHYPLTKITRHVFLR
Sequences:
>Translated_275_residues MDTKTTHVMPWRIEDIDLNRIDRQRAAANEDLLLLLCASSFIESGSDLYTSNLSQFFNDDPEVSAWLNNAWEHEELQHGR ALKAYIAHVWPEFDWDTAFANFFAEYSKTCKVEAFEKTRALEMVARCVVETGTATLYRAINECSDEPVLKEITDNIRTDE VRHYKHFFKFFKKYNQLEGNGRLAVLGALARRVMEIKNEDSEIALRHVFAVRYPDRVGDSQYNRERAARISTLVRRNLSA DMCVKMLLKPLDLPAKIQPGVHYPLTKITRHVFLR >Mature_275_residues MDTKTTHVMPWRIEDIDLNRIDRQRAAANEDLLLLLCASSFIESGSDLYTSNLSQFFNDDPEVSAWLNNAWEHEELQHGR ALKAYIAHVWPEFDWDTAFANFFAEYSKTCKVEAFEKTRALEMVARCVVETGTATLYRAINECSDEPVLKEITDNIRTDE VRHYKHFFKFFKKYNQLEGNGRLAVLGALARRVMEIKNEDSEIALRHVFAVRYPDRVGDSQYNRERAARISTLVRRNLSA DMCVKMLLKPLDLPAKIQPGVHYPLTKITRHVFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31947; Mature: 31947
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKTTHVMPWRIEDIDLNRIDRQRAAANEDLLLLLCASSFIESGSDLYTSNLSQFFNDD CCCCCCEECCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PEVSAWLNNAWEHEELQHGRALKAYIAHVWPEFDWDTAFANFFAEYSKTCKVEAFEKTRA CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LEMVARCVVETGTATLYRAINECSDEPVLKEITDNIRTDEVRHYKHFFKFFKKYNQLEGN HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GRLAVLGALARRVMEIKNEDSEIALRHVFAVRYPDRVGDSQYNRERAARISTLVRRNLSA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCH DMCVKMLLKPLDLPAKIQPGVHYPLTKITRHVFLR HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MDTKTTHVMPWRIEDIDLNRIDRQRAAANEDLLLLLCASSFIESGSDLYTSNLSQFFNDD CCCCCCEECCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PEVSAWLNNAWEHEELQHGRALKAYIAHVWPEFDWDTAFANFFAEYSKTCKVEAFEKTRA CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LEMVARCVVETGTATLYRAINECSDEPVLKEITDNIRTDEVRHYKHFFKFFKKYNQLEGN HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GRLAVLGALARRVMEIKNEDSEIALRHVFAVRYPDRVGDSQYNRERAARISTLVRRNLSA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCH DMCVKMLLKPLDLPAKIQPGVHYPLTKITRHVFLR HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA