Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067468
Identifier: 78067468
GI number: 78067468
Start: 3133116
End: 3133622
Strand: Reverse
Name: 78067468
Synonym: Bcep18194_A5999
Alternate gene names: NA
Gene position: 3133622-3133116 (Counterclockwise)
Preceding gene: 78067469
Following gene: 78067464
Centisome position: 84.83
GC content: 69.23
Gene sequence:
>507_bases ATGACCGATACCCATCGCCACGCGCTCGAACAATGGACGTTCGATGCGTGGCCGCCGGCCGTCGTTTCGTTGTTCGACGG CACGGCGCTCGAACGTCATGCCGACTTCGCCGCATCGCTGATCGTCGCAACCGACGACGGCCAGTTGCGCACGACGCTGC TCGGCGTCGGCGAGATCTACGCACACGATGCGCGCACGCTGCTGCTGGCGCTCTGGCCGCAATCGCGTGCGGCGCGCGCG ATCGCGCAACGGCGGTCGGCCGCGTTGACGCTCGTCGCGGACGGCGCGTTCTTTCAGGCGCAATTGAGGATGGCGCCGCT CGAAGGAGACTTCGGCGGACTGGCCGGATTCGCTGCGACGATCGCGCACGGCGATGCGCAGCGGGTCGGCTATGCGCGTC TCGCGACAGGCGTCACGTTCACGCTGGAAGGGGAGCGCGCCGCGGTGCTCGCACGCTGGCAACGCCAGGTCGAGCACCTG CGGCGCGCAGCCGCACGGCTTCAGTGA
Upstream 100 bases:
>100_bases AAGATCACGCGGCACGTGTTCCTGCGCTGATCGCCGCGGCGCGGCCCGGCGCGCGTATGCTGCGGCATCTTCATCCGCTT TCCACCGGGGCCACGCCATC
Downstream 100 bases:
>100_bases CCGCGCTGGCCGCTGCGCGACGAACGGTTGCGGTTCGGGTGCGCGGCATTGCCGTTCGCCGGGCGGGCGCTGTTGCCGCC ACCGGCCGGACGCCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTDTHRHALEQWTFDAWPPAVVSLFDGTALERHADFAASLIVATDDGQLRTTLLGVGEIYAHDARTLLLALWPQSRAARA IAQRRSAALTLVADGAFFQAQLRMAPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQVEHL RRAAARLQ
Sequences:
>Translated_168_residues MTDTHRHALEQWTFDAWPPAVVSLFDGTALERHADFAASLIVATDDGQLRTTLLGVGEIYAHDARTLLLALWPQSRAARA IAQRRSAALTLVADGAFFQAQLRMAPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQVEHL RRAAARLQ >Mature_167_residues TDTHRHALEQWTFDAWPPAVVSLFDGTALERHADFAASLIVATDDGQLRTTLLGVGEIYAHDARTLLLALWPQSRAARAI AQRRSAALTLVADGAFFQAQLRMAPLEGDFGGLAGFAATIAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQVEHLR RAAARLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18274; Mature: 18143
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHRHALEQWTFDAWPPAVVSLFDGTALERHADFAASLIVATDDGQLRTTLLGVGEIY CCCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHEEEEEEECCCCEEEHEEEHHHHH AHDARTLLLALWPQSRAARAIAQRRSAALTLVADGAFFQAQLRMAPLEGDFGGLAGFAAT HHHHHEEEEEECCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHH IAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQVEHLRRAAARLQ HHCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDTHRHALEQWTFDAWPPAVVSLFDGTALERHADFAASLIVATDDGQLRTTLLGVGEIY CCHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHEEEEEEECCCCEEEHEEEHHHHH AHDARTLLLALWPQSRAARAIAQRRSAALTLVADGAFFQAQLRMAPLEGDFGGLAGFAAT HHHHHEEEEEECCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHH IAHGDAQRVGYARLATGVTFTLEGERAAVLARWQRQVEHLRRAAARLQ HHCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA