Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is nap [H]

Identifier: 78067218

GI number: 78067218

Start: 2854812

End: 2856038

Strand: Direct

Name: nap [H]

Synonym: Bcep18194_A5749

Alternate gene names: 78067218

Gene position: 2854812-2856038 (Clockwise)

Preceding gene: 78067217

Following gene: 78067222

Centisome position: 77.28

GC content: 69.93

Gene sequence:

>1227_bases
ATGAGCGCGATCGTCAGGTCGCCCCGCCACGCCCGCGCGATTCGCTCGGCTTACGAGGCTGCGCTGTCGCACTGGCCGGC
TGGACATCGGCGCATCACCGTGCAGACGCGCCATGGCACCACGCATGTGATTGCCTGCGGTCCGGAGCACGCGCCGCCGG
TCGTACTGATCCACGGCGCGCAGACGACAGCGGCGAGTTGGCAGCACTACGCGGGCGAAGGGTCGAAGCATTTCCGGCTC
TACGCGATCGACGTGATCGGCGAAGCGGGACCCAGCGCCCCGTCGCGGCCACCGCTCGCGAGCGACGCGTACGCGCAGTG
GCTCGACGACGTACTCGACGGCCTGGGCGTGTCACGCGCCGCGTTCGTCGGCATCTCGCTCGGTGCGCGAACCGCGCTCG
ATTTCGCGTTGCGGCGGCCGGCGCGCGTCACGCGGCTTGCGTTGCTTTGCCCGTCCGGCATCGGCCGGCAGAAACCGTTT
CTGTGGTGGGCGCTGCCGCTGTTACTGCTCGGCGATGTCGGGCGCGCCGGCGTGCGACGGCGCGTGCTCGGCCGCCTGCC
GCCCGCATCGACGCCGGCCGAGCGCGACACGTTCGCGCTCATGCGCGCCGTGGATCGCGGCTTCCGGCCGCGCCTCGAAG
CGATCCCGGTGTTCGGCGACGGCGCGCTGCGCACGCTGTCCACGCCCGTCATGGCGATCGTCGGCGGTCGCGACGTCATG
CTCGATTCGCGCGAGACGCGCGATCGCCTGACGCGTCTCGTGCCGCACGCGCAGGTCCTGTTTCTTCCGGATCAATACCA
CTTCATCCGCGGGCAGCGCGACACCGTGCTCGCATTTCTCATGTCGACGGAGCCAACCCGCATGCACCACCGAATCGTCC
AGGCAGCCGGCCACCGTGTGCTGGTCCGCGATCCCGCCGCCGGCCTGGTACAACGCGAAAGCGATGCGCTCGACCTCGTT
GCGCTCGCGCACGAGCATGAAGCCGACTGGGTCGCGGTGCCCGCCGACGCGCTGCACGATGATTTCTACCGGCTCGAAAG
CGGCCTCGCAGGCGCCGTGTTGCAGAAGCTCGTCAACTACGGCGTCCGGCTCGGCGTGGTCGGTGAAATCGACCACCGGC
TCGCGCGCAGCGAAGCGCTTCGCGCGCTCGTTCGCGAGTCCAATCGCGGTACCTCGGTGTGGTTCGTCTCGAACGAGGGG
GATCTGCTGCGCAAGCTCGGCGCGTGA

Upstream 100 bases:

>100_bases
ATCCCGCCGGCAGCCTGGTCAAGATCATCGTTGCCGCAACGCCGGCCGACACGGCCGCGCTGATGTCGTCGGTCGAGGCA
CTGTTGCAGCAAAGCGGGAC

Downstream 100 bases:

>100_bases
CGCGTCATCCAGGCTCACCCCGGACGAACAAAAGCCCCGAAGGCCTTCCGGCATTCGGGGCTTTTGTTGCGCAAGTTGCG
CGAGCCGCCTGCATCAGGCG

Product: Alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSAIVRSPRHARAIRSAYEAALSHWPAGHRRITVQTRHGTTHVIACGPEHAPPVVLIHGAQTTAASWQHYAGEGSKHFRL
YAIDVIGEAGPSAPSRPPLASDAYAQWLDDVLDGLGVSRAAFVGISLGARTALDFALRRPARVTRLALLCPSGIGRQKPF
LWWALPLLLLGDVGRAGVRRRVLGRLPPASTPAERDTFALMRAVDRGFRPRLEAIPVFGDGALRTLSTPVMAIVGGRDVM
LDSRETRDRLTRLVPHAQVLFLPDQYHFIRGQRDTVLAFLMSTEPTRMHHRIVQAAGHRVLVRDPAAGLVQRESDALDLV
ALAHEHEADWVAVPADALHDDFYRLESGLAGAVLQKLVNYGVRLGVVGEIDHRLARSEALRALVRESNRGTSVWFVSNEG
DLLRKLGA

Sequences:

>Translated_408_residues
MSAIVRSPRHARAIRSAYEAALSHWPAGHRRITVQTRHGTTHVIACGPEHAPPVVLIHGAQTTAASWQHYAGEGSKHFRL
YAIDVIGEAGPSAPSRPPLASDAYAQWLDDVLDGLGVSRAAFVGISLGARTALDFALRRPARVTRLALLCPSGIGRQKPF
LWWALPLLLLGDVGRAGVRRRVLGRLPPASTPAERDTFALMRAVDRGFRPRLEAIPVFGDGALRTLSTPVMAIVGGRDVM
LDSRETRDRLTRLVPHAQVLFLPDQYHFIRGQRDTVLAFLMSTEPTRMHHRIVQAAGHRVLVRDPAAGLVQRESDALDLV
ALAHEHEADWVAVPADALHDDFYRLESGLAGAVLQKLVNYGVRLGVVGEIDHRLARSEALRALVRESNRGTSVWFVSNEG
DLLRKLGA
>Mature_407_residues
SAIVRSPRHARAIRSAYEAALSHWPAGHRRITVQTRHGTTHVIACGPEHAPPVVLIHGAQTTAASWQHYAGEGSKHFRLY
AIDVIGEAGPSAPSRPPLASDAYAQWLDDVLDGLGVSRAAFVGISLGARTALDFALRRPARVTRLALLCPSGIGRQKPFL
WWALPLLLLGDVGRAGVRRRVLGRLPPASTPAERDTFALMRAVDRGFRPRLEAIPVFGDGALRTLSTPVMAIVGGRDVML
DSRETRDRLTRLVPHAQVLFLPDQYHFIRGQRDTVLAFLMSTEPTRMHHRIVQAAGHRVLVRDPAAGLVQRESDALDLVA
LAHEHEADWVAVPADALHDDFYRLESGLAGAVLQKLVNYGVRLGVVGEIDHRLARSEALRALVRESNRGTSVWFVSNEGD
LLRKLGA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.1 [H]

Molecular weight: Translated: 44668; Mature: 44537

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIVRSPRHARAIRSAYEAALSHWPAGHRRITVQTRHGTTHVIACGPEHAPPVVLIHGA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCEEEEECC
QTTAASWQHYAGEGSKHFRLYAIDVIGEAGPSAPSRPPLASDAYAQWLDDVLDGLGVSRA
CCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
AFVGISLGARTALDFALRRPARVTRLALLCPSGIGRQKPFLWWALPLLLLGDVGRAGVRR
HHEEEECCHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
RVLGRLPPASTPAERDTFALMRAVDRGFRPRLEAIPVFGDGALRTLSTPVMAIVGGRDVM
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCEEEEECCCEEE
LDSRETRDRLTRLVPHAQVLFLPDQYHFIRGQRDTVLAFLMSTEPTRMHHRIVQAAGHRV
ECCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHEEEEEECCCCHHHHHHHHHHCCCEE
LVRDPAAGLVQRESDALDLVALAHEHEADWVAVPADALHDDFYRLESGLAGAVLQKLVNY
EEECCCCHHHHCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHC
GVRLGVVGEIDHRLARSEALRALVRESNRGTSVWFVSNEGDLLRKLGA
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCC
>Mature Secondary Structure 
SAIVRSPRHARAIRSAYEAALSHWPAGHRRITVQTRHGTTHVIACGPEHAPPVVLIHGA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCEEEEECC
QTTAASWQHYAGEGSKHFRLYAIDVIGEAGPSAPSRPPLASDAYAQWLDDVLDGLGVSRA
CCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
AFVGISLGARTALDFALRRPARVTRLALLCPSGIGRQKPFLWWALPLLLLGDVGRAGVRR
HHEEEECCHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
RVLGRLPPASTPAERDTFALMRAVDRGFRPRLEAIPVFGDGALRTLSTPVMAIVGGRDVM
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCEEEEECCCEEE
LDSRETRDRLTRLVPHAQVLFLPDQYHFIRGQRDTVLAFLMSTEPTRMHHRIVQAAGHRV
ECCHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHEEEEEECCCCHHHHHHHHHHCCCEE
LVRDPAAGLVQRESDALDLVALAHEHEADWVAVPADALHDDFYRLESGLAGAVLQKLVNY
EEECCCCHHHHCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHC
GVRLGVVGEIDHRLARSEALRALVRESNRGTSVWFVSNEGDLLRKLGA
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]