Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065679
Identifier: 78065679
GI number: 78065679
Start: 1142652
End: 1143434
Strand: Reverse
Name: 78065679
Synonym: Bcep18194_A4207
Alternate gene names: NA
Gene position: 1143434-1142652 (Counterclockwise)
Preceding gene: 78065680
Following gene: 78065677
Centisome position: 30.95
GC content: 65.64
Gene sequence:
>783_bases ATGGGCCAGATCACCCTTTCCCTCAAGGACGACACGCTCGAGTCCCTGCGCAAGGACTACGACGCGTTCGTCCGCGTGTC GCTGAAACTCGACCCGCAGTTCGCGACGCCGTCGTTCGAGGATTTCCTGCGCGCCAAACTGCTCGACAACATGGTGCCGC TGACCGAGCACGCAGTGCAGCGGATGCTGCAGGGCGGTCAGTACGCGTGGGCAAAACGCACGCTCGACAAGGAATTTCCG GACGTCGTCGCGATCCTGATGCGACAGGCCGGCGAATTCGGCTTCGGCTTCGCGTCGCGCTCCGAATGGACCCCCGACGA ACTCGCGAAGGCTTGCCGCGATTGGGCAAAAGCGATCGTCGCCGAAGCCCAGGGCGACCCATCGCTGATCGATCCGCTCG CTTCGCAGATCAAGGGGGCGGCGCAAGACATCCAGACGCTCGAGGAACTGATGCAGACGCCTGCGTGGCGGCTCGCGGAA TCGCTGCGACAACGAGTCTACGAGGCCAAGCTCGCGTGCGAGATGAGCGTCGGCAGCACCGCGCGCGACAAGCTCGGCGA ACTGCGCGGACTGCTGCGGCTCGGGCTCTCGCACGGCTCGTTCCAGAAGCAGGAAGCGCAGCAGATCATGGAGTACCTGC GGCTGCTGAAGCCGGAGATCTTCGTCGAGGAACCGTACGACGTCTTCGCCCGCCTCGCCGCGTGGCTGCGCAGCGTATTC ACCCCGGCTGCCGCGCGGCCGGCGCAGGGCCAGGGACAAGGGCAAAGCCAACGGCGACCGTAA
Upstream 100 bases:
>100_bases CCCGCCACCGGCCTCGGCGCGCACCGGTCAGTCGACGCTGCGCCCGTCCCGGTGCGCCGTGCCGGCCATCGGCTTGCGCG GGCCGCCATCGAGACGATTC
Downstream 100 bases:
>100_bases CGGCACGCCCGATCGCATCGACACATGAAAGCGGCCCGATTCGCGCAATGCGAACCGGGCCGTGGGATGGCCACCGTCGC GACGCCCCCTCCGGGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFP DVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDPSLIDPLASQIKGAAQDIQTLEELMQTPAWRLAE SLRQRVYEAKLACEMSVGSTARDKLGELRGLLRLGLSHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF TPAAARPAQGQGQGQSQRRP
Sequences:
>Translated_260_residues MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFP DVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDPSLIDPLASQIKGAAQDIQTLEELMQTPAWRLAE SLRQRVYEAKLACEMSVGSTARDKLGELRGLLRLGLSHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF TPAAARPAQGQGQGQSQRRP >Mature_259_residues GQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFPD VVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDPSLIDPLASQIKGAAQDIQTLEELMQTPAWRLAES LRQRVYEAKLACEMSVGSTARDKLGELRGLLRLGLSHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVFT PAAARPAQGQGQGQSQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29232; Mature: 29101
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQ CCEEEEEECHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH RMLQGGQYAWAKRTLDKEFPDVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEAQGDPSLIDPLASQIKGAAQDIQTLEELMQTPAWRLAESLRQRVYEAKLACEMSVGST HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCH ARDKLGELRGLLRLGLSHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH TPAAARPAQGQGQGQSQRRP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQ CEEEEEECHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH RMLQGGQYAWAKRTLDKEFPDVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEAQGDPSLIDPLASQIKGAAQDIQTLEELMQTPAWRLAESLRQRVYEAKLACEMSVGST HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCH ARDKLGELRGLLRLGLSHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH TPAAARPAQGQGQGQSQRRP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA