Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065680
Identifier: 78065680
GI number: 78065680
Start: 1143596
End: 1143934
Strand: Reverse
Name: 78065680
Synonym: Bcep18194_A4208
Alternate gene names: NA
Gene position: 1143934-1143596 (Counterclockwise)
Preceding gene: 78065681
Following gene: 78065679
Centisome position: 30.97
GC content: 70.8
Gene sequence:
>339_bases GTGAGCTACGCGCTGCTGATTCTCGGGATGGCCGTCATCACCTACGCGATCCGCTCGACGCTGTTCCTGTTCGGCGAACG GCTGACCTTCCCGCCCCTCGTGCGGACCGCGCTCGGCTTCGTGCCCGTCACCGTGCTGACCGCGATCATCGTGCCGATGG CCGTCTCGCCGCACGGCGGCACGGCCGAGCTGACCTGGCGCAATCCGCAGCTCGTCGGCGCGCTCGCTGCCGTGCTCGTG TCGGCCGCCACCCGCCGCCCGCTCGTGACGATCGCGGCGGGGCTCGCGGTGTTCTTTTTCTGGCAAGGGGTCGTGCTGCC CCACTGGCTGCCCGCCTGA
Upstream 100 bases:
>100_bases TCGGGCTGCTCGGCGCAGTCGCCGCCGGCGTCGCGATCGGCGTCGCGCTCACGCTGCTGCACGAACGCACGCGCGCCGGC TCACGCACGGAGGCTGCATC
Downstream 100 bases:
>100_bases GTACACGCTCGGTTGCGCGCGCTCAAGTTTCCGCCCGGTACGCCGATATAGGGAATGAAGACCCGCCACCGGCCTCGGCG CGCACCGGTCAGTCGACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALGFVPVTVLTAIIVPMAVSPHGGTAELTWRNPQLVGALAAVLV SAATRRPLVTIAAGLAVFFFWQGVVLPHWLPA
Sequences:
>Translated_112_residues MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALGFVPVTVLTAIIVPMAVSPHGGTAELTWRNPQLVGALAAVLV SAATRRPLVTIAAGLAVFFFWQGVVLPHWLPA >Mature_111_residues SYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALGFVPVTVLTAIIVPMAVSPHGGTAELTWRNPQLVGALAAVLVS AATRRPLVTIAAGLAVFFFWQGVVLPHWLPA
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11985; Mature: 11853
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALGFVPVTVLTAIIVPMAVSPHGG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TAELTWRNPQLVGALAAVLVSAATRRPLVTIAAGLAVFFFWQGVVLPHWLPA CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALGFVPVTVLTAIIVPMAVSPHGG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TAELTWRNPQLVGALAAVLVSAATRRPLVTIAAGLAVFFFWQGVVLPHWLPA CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA