Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is ybcJ [C]
Identifier: 78065677
GI number: 78065677
Start: 1141639
End: 1141857
Strand: Reverse
Name: ybcJ [C]
Synonym: Bcep18194_A4205
Alternate gene names: 78065677
Gene position: 1141857-1141639 (Counterclockwise)
Preceding gene: 78065679
Following gene: 78065676
Centisome position: 30.91
GC content: 66.67
Gene sequence:
>219_bases ATGCCCAACCTGGATTTCACGCTGACCGGCGAATACGTCGAGCTGCACAACCTTCTCAAGATCACCGGCCTCGCGGACAG CGGCGGCACCGCGAAGCTGATCGTCGCGTCCGGCGCGGTGAAAGTCGACGGCGCGGTCGAGCTGCGCAAGACCTGCAAGA TCCGCGCGGGCCAGGTCGTCCTGCTCGGCGACACGCGCATTGCCGTGCGCGAAGCCTAG
Upstream 100 bases:
>100_bases CCTAACATCTGCCTCCGGCGGCCGGCCGCGCTCGCGCGCCGGCCCGCGGTGCCGTATGATGCGAGGCGATTCCTCCCGCG CATTGCGCACCCTCTTCGTC
Downstream 100 bases:
>100_bases GGCCGACGGTTCCCCCTGCCTGCGACATGGCCATCGGCGCGCGCGTTCGACACGGTTCGAATAAAGCCGTAAGCTAGCCG TCTCTCAAAATAAATACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA
Sequences:
>Translated_72_residues MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA >Mature_71_residues PNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081752, Length=58, Percent_Identity=53.448275862069, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7579; Mature: 7448
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVV CCCCCEEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE LLGDTRIAVREA EECCCEEEEEEC >Mature Secondary Structure PNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVV CCCCEEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE LLGDTRIAVREA EECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA