Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is ybcJ [C]

Identifier: 78065677

GI number: 78065677

Start: 1141639

End: 1141857

Strand: Reverse

Name: ybcJ [C]

Synonym: Bcep18194_A4205

Alternate gene names: 78065677

Gene position: 1141857-1141639 (Counterclockwise)

Preceding gene: 78065679

Following gene: 78065676

Centisome position: 30.91

GC content: 66.67

Gene sequence:

>219_bases
ATGCCCAACCTGGATTTCACGCTGACCGGCGAATACGTCGAGCTGCACAACCTTCTCAAGATCACCGGCCTCGCGGACAG
CGGCGGCACCGCGAAGCTGATCGTCGCGTCCGGCGCGGTGAAAGTCGACGGCGCGGTCGAGCTGCGCAAGACCTGCAAGA
TCCGCGCGGGCCAGGTCGTCCTGCTCGGCGACACGCGCATTGCCGTGCGCGAAGCCTAG

Upstream 100 bases:

>100_bases
CCTAACATCTGCCTCCGGCGGCCGGCCGCGCTCGCGCGCCGGCCCGCGGTGCCGTATGATGCGAGGCGATTCCTCCCGCG
CATTGCGCACCCTCTTCGTC

Downstream 100 bases:

>100_bases
GGCCGACGGTTCCCCCTGCCTGCGACATGGCCATCGGCGCGCGCGTTCGACACGGTTCGAATAAAGCCGTAAGCTAGCCG
TCTCTCAAAATAAATACATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA

Sequences:

>Translated_72_residues
MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA
>Mature_71_residues
PNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVREA

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081752, Length=58, Percent_Identity=53.448275862069, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7579; Mature: 7448

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVV
CCCCCEEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE
LLGDTRIAVREA
EECCCEEEEEEC
>Mature Secondary Structure 
PNLDFTLTGEYVELHNLLKITGLADSGGTAKLIVASGAVKVDGAVELRKTCKIRAGQVV
CCCCEEEECCCEEECCEEEEEEECCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE
LLGDTRIAVREA
EECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA