| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yjgA [C]
Identifier: 78065666
GI number: 78065666
Start: 1127799
End: 1128413
Strand: Reverse
Name: yjgA [C]
Synonym: Bcep18194_A4194
Alternate gene names: 78065666
Gene position: 1128413-1127799 (Counterclockwise)
Preceding gene: 78065668
Following gene: 78065665
Centisome position: 30.55
GC content: 66.02
Gene sequence:
>615_bases ATGCCGTCCATGACACGCAAAACCCGAATCCAGCCGATCGAGCATGCCGCCGAAGACGACGACAATGGCTACGATCGCCC CAGCAAATCCCAGTTGAAGCGCGAGATGCACGAGCTGCAGGTGCTCGGCCAGGCACTCGTCGATCTGCCGAAAGACGCGC TGAAACGCATGCCGATGCCCGAAAGCCTCGCGGACGCCGTGCGCGAGGCGCGCCGAATCACCGATCACGAAGGCAAGCGC CGCCAGCTCCAGTACGTCGGCCGCGTGATGCGCTCGCTGACCGACGACGAGACGGCCGCGCTGCGCACCGCGCTCGACGC GCAACGCGGCGTGAACAAGGCCGCGACGGCCCGCCTGCACTGGATCGAACGCACCCGCGAACAGTTGCTCGCGAACGACG ACGCACTGACCGAATTCCTGCGCCAGCACCCGGAAGCCGATATCCAGGAAGGCCGCACGCTGATCCGCAACGCACGCAAG GAAGCGCAGCAAGGCAAGCCGCCGCGCTATTTCCGCGAGCTGTTCCAGTGGATCAAGACCGCCGGCGGCACGTCCAATGC GGACGACGAAGCGGCGGACGACGCCGGAGACGACCATGACGACGACGAAGCGTAA
Upstream 100 bases:
>100_bases CGGGCGGGCGCCCGCATGTTCAAAATGTTGCGTATCCCGCGATCATAGCAAGGTCCGGGGCCGGGCACCGACAAGCTTGG GGTGTCCGCGGCGCGATACA
Downstream 100 bases:
>100_bases CCACCCGGACGAGCTCGTCGTCGGCCTCGTGTCGATCAGCGACCGCGCGAGCACGGGTGTCTACGAGGACAAAGGCATTC CCGCGCTGCAGGAATGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPSMTRKTRIQPIEHAAEDDDNGYDRPSKSQLKREMHELQVLGQALVDLPKDALKRMPMPESLADAVREARRITDHEGKR RQLQYVGRVMRSLTDDETAALRTALDAQRGVNKAATARLHWIERTREQLLANDDALTEFLRQHPEADIQEGRTLIRNARK EAQQGKPPRYFRELFQWIKTAGGTSNADDEAADDAGDDHDDDEA
Sequences:
>Translated_204_residues MPSMTRKTRIQPIEHAAEDDDNGYDRPSKSQLKREMHELQVLGQALVDLPKDALKRMPMPESLADAVREARRITDHEGKR RQLQYVGRVMRSLTDDETAALRTALDAQRGVNKAATARLHWIERTREQLLANDDALTEFLRQHPEADIQEGRTLIRNARK EAQQGKPPRYFRELFQWIKTAGGTSNADDEAADDAGDDHDDDEA >Mature_203_residues PSMTRKTRIQPIEHAAEDDDNGYDRPSKSQLKREMHELQVLGQALVDLPKDALKRMPMPESLADAVREARRITDHEGKRR QLQYVGRVMRSLTDDETAALRTALDAQRGVNKAATARLHWIERTREQLLANDDALTEFLRQHPEADIQEGRTLIRNARKE AQQGKPPRYFRELFQWIKTAGGTSNADDEAADDAGDDHDDDEA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=40.5228758169935, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 23265; Mature: 23134
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMTRKTRIQPIEHAAEDDDNGYDRPSKSQLKREMHELQVLGQALVDLPKDALKRMPMP CCCCCHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC ESLADAVREARRITDHEGKRRQLQYVGRVMRSLTDDETAALRTALDAQRGVNKAATARLH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH WIERTREQLLANDDALTEFLRQHPEADIQEGRTLIRNARKEAQQGKPPRYFRELFQWIKT HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AGGTSNADDEAADDAGDDHDDDEA CCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure PSMTRKTRIQPIEHAAEDDDNGYDRPSKSQLKREMHELQVLGQALVDLPKDALKRMPMP CCCCHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC ESLADAVREARRITDHEGKRRQLQYVGRVMRSLTDDETAALRTALDAQRGVNKAATARLH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH WIERTREQLLANDDALTEFLRQHPEADIQEGRTLIRNARKEAQQGKPPRYFRELFQWIKT HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AGGTSNADDEAADDAGDDHDDDEA CCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA